RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 CSNK1G2-AS1Q8NCQ2 148 aa3.16□□□□□ -1.9
NPM1-207ENST00000521260 CCL19Q99731 98 aa3.16□□□□□ -1.9
NPM1-207ENST00000521260 ANAPC11Q9NYG5 84 aa3.16□□□□□ -1.9
NPM1-207ENST00000521260 URB1O60287 2271 aaKnown RBP3.16□□□□□ -1.9
NPM1-207ENST00000521260 ASXL3Q9C0F0 2248 aa3.15□□□□□ -1.9
NPM1-207ENST00000521260 KRTAP9-7A8MTY7 169 aa3.15□□□□□ -1.91
NPM1-207ENST00000521260 LY6G6CO95867 125 aa3.15□□□□□ -1.91
NPM1-207ENST00000521260 P0C880 135 aa3.15□□□□□ -1.91
NPM1-207ENST00000521260 CASC10Q5T4H9 136 aa3.15□□□□□ -1.91
NPM1-207ENST00000521260 BRD3OSQ6XYD6 125 aa3.15□□□□□ -1.91
NPM1-207ENST00000521260 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.91
NPM1-207ENST00000521260 TRANK1O15050 2925 aa3.14□□□□□ -1.91
NPM1-207ENST00000521260 LAMA2P24043 3122 aaKnown RBP3.14□□□□□ -1.91
NPM1-207ENST00000521260 KRTAP4-16G5E9R7 235 aaPredicted RBP3.14□□□□□ -1.91
NPM1-207ENST00000521260 KRTAP26-1Q6PEX3 210 aa3.14□□□□□ -1.91
NPM1-207ENST00000521260 TMEM105Q8N8V8 129 aa3.14□□□□□ -1.91
NPM1-207ENST00000521260 C15orf56Q8N910 161 aa3.14□□□□□ -1.91
NPM1-207ENST00000521260 ABCA1O95477 2261 aa3.14□□□□□ -1.91
NPM1-207ENST00000521260 CHD7Q9P2D1 2997 aa3.14□□□□□ -1.91
NPM1-207ENST00000521260 TECTAO75443 2155 aa3.14□□□□□ -1.91
NPM1-207ENST00000521260 CHD9Q3L8U1 2897 aa3.14□□□□□ -1.91
NPM1-207ENST00000521260 SPRR1BP22528 89 aa3.13□□□□□ -1.91
NPM1-207ENST00000521260 MUC6Q6W4X9 2439 aa3.12□□□□□ -1.91
NPM1-207ENST00000521260 A0A1B0GVX0 72 aa3.12□□□□□ -1.91
NPM1-207ENST00000521260 FAM168BA1KXE4 195 aa3.12□□□□□ -1.91
NPM1-207ENST00000521260 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
NPM1-207ENST00000521260 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
NPM1-207ENST00000521260 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
NPM1-207ENST00000521260 BDP1A6H8Y1 2624 aa3.12□□□□□ -1.91
NPM1-207ENST00000521260 ZFHX3Q15911 3703 aa3.12□□□□□ -1.91
NPM1-207ENST00000521260 SORL1Q92673 2214 aa3.11□□□□□ -1.91
NPM1-207ENST00000521260 PIEZO1Q92508 2521 aa3.11□□□□□ -1.91
NPM1-207ENST00000521260 DEFB130BP0DP73 79 aa3.11□□□□□ -1.91
NPM1-207ENST00000521260 DEFB130AP0DP74 79 aa3.11□□□□□ -1.91
NPM1-207ENST00000521260 KRTAP9-8Q9BYQ0 159 aa3.11□□□□□ -1.91
NPM1-207ENST00000521260 WDR87Q6ZQQ6 2873 aa3.11□□□□□ -1.91
NPM1-207ENST00000521260 MED13LQ71F56 2210 aa3.11□□□□□ -1.91
NPM1-207ENST00000521260 REV3LO60673 3130 aa3.1□□□□□ -1.91
NPM1-207ENST00000521260 LINC00304Q8N9R0 145 aa3.1□□□□□ -1.91
NPM1-207ENST00000521260 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
NPM1-207ENST00000521260 SSBP3-AS1Q7Z2R9 100 aa3.09□□□□□ -1.91
NPM1-207ENST00000521260 KRTAP4-5Q9BYR2 181 aa3.09□□□□□ -1.91
NPM1-207ENST00000521260 ABCA4P78363 2273 aa3.09□□□□□ -1.92
NPM1-207ENST00000521260 A0A1W2PNU3 283 aaPredicted RBP3.08□□□□□ -1.92
NPM1-207ENST00000521260 KRTAP11-1Q8IUC1 163 aa3.08□□□□□ -1.92
NPM1-207ENST00000521260 MYO15AQ9UKN7 3530 aa3.08□□□□□ -1.92
NPM1-207ENST00000521260 DOPEY2Q9Y3R5 2298 aa3.08□□□□□ -1.92
NPM1-207ENST00000521260 H3BNG1 76 aa3.07□□□□□ -1.92
NPM1-207ENST00000521260 DEFB136Q30KP8 78 aa3.07□□□□□ -1.92
NPM1-207ENST00000521260 USP34Q70CQ2 3546 aa3.07□□□□□ -1.92
NPM1-207ENST00000521260 A0A087WTM6 91 aa3.06□□□□□ -1.92
NPM1-207ENST00000521260 PANO1I0J062 215 aa3.06□□□□□ -1.92
NPM1-207ENST00000521260 COX6B2Q6YFQ2 88 aa3.06□□□□□ -1.92
NPM1-207ENST00000521260 ZDBF2Q9HCK1 2354 aa3.05□□□□□ -1.92
NPM1-207ENST00000521260 ICE1Q9Y2F5 2266 aa3.05□□□□□ -1.92
NPM1-207ENST00000521260 A0A096LPF7 62 aa3.05□□□□□ -1.92
NPM1-207ENST00000521260 SPART-AS1P0CW21 52 aa3.05□□□□□ -1.92
NPM1-207ENST00000521260 CACNA1HO95180 2353 aa3.05□□□□□ -1.92
NPM1-207ENST00000521260 DMDP11532 3685 aa3.05□□□□□ -1.92
NPM1-207ENST00000521260 DNAH14Q0VDD8 3507 aa3.04□□□□□ -1.92
NPM1-207ENST00000521260 GIG44P09565 113 aaPredicted RBP3.04□□□□□ -1.92
NPM1-207ENST00000521260 WNK2Q9Y3S1 2297 aa3.04□□□□□ -1.92
NPM1-207ENST00000521260 KMT2BQ9UMN6 2715 aaPredicted RBP3.04□□□□□ -1.92
NPM1-207ENST00000521260 CACNA1AO00555 2505 aa3.03□□□□□ -1.92
NPM1-207ENST00000521260 FAM186AA6NE01 2351 aa3.03□□□□□ -1.92
NPM1-207ENST00000521260 CACNA1EQ15878 2313 aa3.03□□□□□ -1.92
NPM1-207ENST00000521260 A0A1B0GU33 70 aa3.03□□□□□ -1.92
NPM1-207ENST00000521260 Q96NJ1 140 aa3.03□□□□□ -1.92
NPM1-207ENST00000521260 KRTAP9-3Q9BYQ3 159 aa3.03□□□□□ -1.92
NPM1-207ENST00000521260 CRIPTQ9P021 101 aa3.03□□□□□ -1.92
NPM1-207ENST00000521260 C5orf42Q9H799 3197 aa3.03□□□□□ -1.92
NPM1-207ENST00000521260 PLCE1Q9P212 2302 aa3.03□□□□□ -1.92
NPM1-207ENST00000521260 KNL1Q8NG31 2342 aa3.02□□□□□ -1.93
NPM1-207ENST00000521260 DCHS1Q96JQ0 3298 aa3.02□□□□□ -1.93
NPM1-207ENST00000521260 IGKV2-30P06310 120 aa3.02□□□□□ -1.93
NPM1-207ENST00000521260 WDFY4Q6ZS81 3184 aa3.02□□□□□ -1.93
NPM1-207ENST00000521260 OTOGLQ3ZCN5 2332 aa3.01□□□□□ -1.93
NPM1-207ENST00000521260 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
NPM1-207ENST00000521260 C10orf99Q6UWK7 81 aa3.01□□□□□ -1.93
NPM1-207ENST00000521260 GVINP1Q7Z2Y8 2422 aa3.01□□□□□ -1.93
NPM1-207ENST00000521260 IGKV2D-30A0A075B6S6 120 aa3□□□□□ -1.93
NPM1-207ENST00000521260 LINC01556Q5JQF7 62 aa3□□□□□ -1.93
NPM1-207ENST00000521260 H1FX-AS1Q4G0G2 97 aa2.99□□□□□ -1.93
NPM1-207ENST00000521260 CIRBP-AS1Q8TBR5 109 aa2.99□□□□□ -1.93
NPM1-207ENST00000521260 PSORS1C2Q9UIG4 136 aa2.99□□□□□ -1.93
NPM1-207ENST00000521260 ZFHX4Q86UP3 3567 aa2.99□□□□□ -1.93
NPM1-207ENST00000521260 A0A0G2JQZ4 141 aa2.98□□□□□ -1.93
NPM1-207ENST00000521260 NBDYA0A0U1RRE5 68 aa2.98□□□□□ -1.93
NPM1-207ENST00000521260 A0A1W2PNN7 141 aa2.98□□□□□ -1.93
NPM1-207ENST00000521260 RIF1Q5UIP0 2472 aaKnown RBP2.98□□□□□ -1.93
NPM1-207ENST00000521260 CFAP54Q96N23 3096 aa2.98□□□□□ -1.93
NPM1-207ENST00000521260 SPTBN1Q01082 2364 aaKnown RBP2.97□□□□□ -1.93
NPM1-207ENST00000521260 AHCTF1Q8WYP5 2266 aa2.97□□□□□ -1.93
NPM1-207ENST00000521260 H0YAA0 97 aa2.97□□□□□ -1.93
NPM1-207ENST00000521260 Q6ZSA8 131 aa2.97□□□□□ -1.93
NPM1-207ENST00000521260 PTPRZ1P23471 2315 aaPredicted RBP2.97□□□□□ -1.93
NPM1-207ENST00000521260 CACNA1BQ00975 2339 aa2.97□□□□□ -1.93
NPM1-207ENST00000521260 ZFHX2Q9C0A1 2572 aaPredicted RBP2.97□□□□□ -1.93
NPM1-207ENST00000521260 TRIOO75962 3097 aa2.96□□□□□ -1.94
NPM1-207ENST00000521260 PRLHP81277 87 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms