RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 LOC730098B7Z3J9 87 aa0.28□□□□□ -2.36
PTPN12-214ENST00000520947 CDKN2A-AS1Q9UH64 79 aa0.28□□□□□ -2.36
PTPN12-214ENST00000520947 DSTQ03001 7570 aaKnown RBP0.27□□□□□ -2.37
PTPN12-214ENST00000520947 UBR3Q6ZT12 1888 aa0.27□□□□□ -2.37
PTPN12-214ENST00000520947 CELSR1Q9NYQ6 3014 aa0.27□□□□□ -2.37
PTPN12-214ENST00000520947 TIAM2Q8IVF5 1701 aa0.27□□□□□ -2.37
PTPN12-214ENST00000520947 TNXBP22105 4242 aa0.26□□□□□ -2.37
PTPN12-214ENST00000520947 MAP3K1Q13233 1512 aa0.26□□□□□ -2.37
PTPN12-214ENST00000520947 PTPN23Q9H3S7 1636 aa0.26□□□□□ -2.37
PTPN12-214ENST00000520947 LTN1O94822 1766 aa0.26□□□□□ -2.37
PTPN12-214ENST00000520947 EP300Q09472 2414 aaPredicted RBP0.26□□□□□ -2.37
PTPN12-214ENST00000520947 PKD1L1Q8TDX9 2849 aa0.26□□□□□ -2.37
PTPN12-214ENST00000520947 NEBP20929 6669 aa0.25□□□□□ -2.37
PTPN12-214ENST00000520947 FLNCQ14315 2725 aa0.25□□□□□ -2.37
PTPN12-214ENST00000520947 NWD1Q149M9 1564 aa0.25□□□□□ -2.37
PTPN12-214ENST00000520947 ANKARQ7Z5J8 1434 aa0.25□□□□□ -2.37
PTPN12-214ENST00000520947 UMAD1C9J7I0 102 aa0.25□□□□□ -2.37
PTPN12-214ENST00000520947 PRM1P04553 51 aa0.25□□□□□ -2.37
PTPN12-214ENST00000520947 ZNF831Q5JPB2 1677 aa0.24□□□□□ -2.37
PTPN12-214ENST00000520947 SPRR2DP22532 72 aa0.24□□□□□ -2.37
PTPN12-214ENST00000520947 IFI27P40305 119 aaPredicted RBP0.24□□□□□ -2.37
PTPN12-214ENST00000520947 CHD8Q9HCK8 2581 aa0.23□□□□□ -2.37
PTPN12-214ENST00000520947 A0A087WXM4 84 aa0.23□□□□□ -2.37
PTPN12-214ENST00000520947 C18orf32Q8TCD1 76 aa0.23□□□□□ -2.37
PTPN12-214ENST00000520947 CSPG4Q6UVK1 2322 aa0.22□□□□□ -2.37
PTPN12-214ENST00000520947 TNRC6CQ9HCJ0 1690 aaKnown RBP0.22□□□□□ -2.37
PTPN12-214ENST00000520947 LCE6AA0A183 80 aa0.22□□□□□ -2.37
PTPN12-214ENST00000520947 IFI6P09912 130 aa0.22□□□□□ -2.37
PTPN12-214ENST00000520947 HMGA1P17096 107 aaKnown RBP0.22□□□□□ -2.37
PTPN12-214ENST00000520947 LELP1Q5T871 98 aa0.22□□□□□ -2.37
PTPN12-214ENST00000520947 ABCA8O94911 1581 aa0.22□□□□□ -2.37
PTPN12-214ENST00000520947 M0R2T5 61 aa0.21□□□□□ -2.38
PTPN12-214ENST00000520947 SMIM13P0DJ93 91 aa0.21□□□□□ -2.38
PTPN12-214ENST00000520947 NREPQ16612 68 aa0.21□□□□□ -2.38
PTPN12-214ENST00000520947 WFDC13Q8IUB5 93 aa0.21□□□□□ -2.38
PTPN12-214ENST00000520947 DOT1LQ8TEK3 1739 aa0.21□□□□□ -2.38
PTPN12-214ENST00000520947 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
PTPN12-214ENST00000520947 REV3LO60673 3130 aa0.2□□□□□ -2.38
PTPN12-214ENST00000520947 NESP48681 1621 aa0.2□□□□□ -2.38
PTPN12-214ENST00000520947 ARFGEF2Q9Y6D5 1785 aa0.2□□□□□ -2.38
PTPN12-214ENST00000520947 HUWE1Q7Z6Z7 4374 aaKnown RBP0.19□□□□□ -2.38
PTPN12-214ENST00000520947 CNOT1A5YKK6 2376 aaKnown RBP0.19□□□□□ -2.38
PTPN12-214ENST00000520947 ANKRD50Q9ULJ7 1429 aa0.19□□□□□ -2.38
PTPN12-214ENST00000520947 CFAP43Q8NDM7 1665 aa0.18□□□□□ -2.38
PTPN12-214ENST00000520947 SETXQ7Z333 2677 aaKnown RBP0.18□□□□□ -2.38
PTPN12-214ENST00000520947 SSPOA2VEC9 5147 aa0.18□□□□□ -2.38
PTPN12-214ENST00000520947 CD163L1Q9NR16 1453 aa0.17□□□□□ -2.38
PTPN12-214ENST00000520947 NSD1Q96L73 2696 aaPredicted RBP0.17□□□□□ -2.38
PTPN12-214ENST00000520947 NDUFA4O00483 81 aa0.17□□□□□ -2.38
PTPN12-214ENST00000520947 NDUFA3O95167 84 aa0.17□□□□□ -2.38
PTPN12-214ENST00000520947 KMT2AQ03164 3969 aa0.16□□□□□ -2.38
PTPN12-214ENST00000520947 SCN11AQ9UI33 1791 aa0.15□□□□□ -2.39
PTPN12-214ENST00000520947 EIF2AK4Q9P2K8 1649 aaKnown RBP0.15□□□□□ -2.39
PTPN12-214ENST00000520947 FLNAP21333 2647 aaKnown RBP0.15□□□□□ -2.39
PTPN12-214ENST00000520947 MAP1BP46821 2468 aaKnown RBP0.14□□□□□ -2.39
PTPN12-214ENST00000520947 C3orf79P0CE67 100 aa0.14□□□□□ -2.39
PTPN12-214ENST00000520947 DEFB135Q30KP9 77 aa0.14□□□□□ -2.39
PTPN12-214ENST00000520947 FAT2Q9NYQ8 4349 aa0.14□□□□□ -2.39
PTPN12-214ENST00000520947 TRANK1O15050 2925 aa0.14□□□□□ -2.39
PTPN12-214ENST00000520947 PRO3102Q9H379 93 aa0.13□□□□□ -2.39
PTPN12-214ENST00000520947 C4AP0C0L4 1744 aa0.13□□□□□ -2.39
PTPN12-214ENST00000520947 C4BP0C0L5 1744 aa0.13□□□□□ -2.39
PTPN12-214ENST00000520947 CICQ96RK0 1608 aaPredicted RBP0.13□□□□□ -2.39
PTPN12-214ENST00000520947 PLXNC1O60486 1568 aa0.12□□□□□ -2.39
PTPN12-214ENST00000520947 THOC2Q8NI27 1593 aaKnown RBP0.12□□□□□ -2.39
PTPN12-214ENST00000520947 LPAP08519 4548 aa0.12□□□□□ -2.39
PTPN12-214ENST00000520947 LMTK2Q8IWU2 1503 aa0.12□□□□□ -2.39
PTPN12-214ENST00000520947 HFM1A2PYH4 1435 aa0.12□□□□□ -2.39
PTPN12-214ENST00000520947 ADAMTS12P58397 1594 aa0.11□□□□□ -2.39
PTPN12-214ENST00000520947 SPRR2BP35325 72 aa0.11□□□□□ -2.39
PTPN12-214ENST00000520947 WIZO95785 1651 aa0.11□□□□□ -2.39
PTPN12-214ENST00000520947 RALGAPBQ86X10 1494 aa0.1□□□□□ -2.39
PTPN12-214ENST00000520947 MYCBP2O75592 4640 aa0.1□□□□□ -2.39
PTPN12-214ENST00000520947 WNK1Q9H4A3 2382 aa0.1□□□□□ -2.39
PTPN12-214ENST00000520947 PLCH1Q4KWH8 1693 aa0.1□□□□□ -2.39
PTPN12-214ENST00000520947 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
PTPN12-214ENST00000520947 DEPDC5O75140 1603 aa0.09□□□□□ -2.39
PTPN12-214ENST00000520947 APC2O95996 2303 aa0.09□□□□□ -2.39
PTPN12-214ENST00000520947 KNL1Q8NG31 2342 aa0.09□□□□□ -2.39
PTPN12-214ENST00000520947 UGGT2Q9NYU1 1516 aa0.09□□□□□ -2.39
PTPN12-214ENST00000520947 LINC00158P58513 81 aa0.09□□□□□ -2.4
PTPN12-214ENST00000520947 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
PTPN12-214ENST00000520947 SMCO4Q9NRQ5 59 aa0.09□□□□□ -2.4
PTPN12-214ENST00000520947 RICTORQ6R327 1708 aa0.09□□□□□ -2.4
PTPN12-214ENST00000520947 MUC2Q02817 5179 aa0.08□□□□□ -2.4
PTPN12-214ENST00000520947 LRRIQ1Q96JM4 1722 aa0.07□□□□□ -2.4
PTPN12-214ENST00000520947 HSPG2P98160 4391 aa0.07□□□□□ -2.4
PTPN12-214ENST00000520947 BSNQ9UPA5 3926 aa0.07□□□□□ -2.4
PTPN12-214ENST00000520947 PCLOQ9Y6V0 5065 aa0.07□□□□□ -2.4
PTPN12-214ENST00000520947 MRPL33O75394 65 aaKnown RBP0.07□□□□□ -2.4
PTPN12-214ENST00000520947 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
PTPN12-214ENST00000520947 AKAP13Q12802 2813 aa0.07□□□□□ -2.4
PTPN12-214ENST00000520947 MYO5CQ9NQX4 1742 aa0.07□□□□□ -2.4
PTPN12-214ENST00000520947 ANKHD1Q8IWZ3 2542 aaKnown RBP0.07□□□□□ -2.4
PTPN12-214ENST00000520947 PRKDCP78527 4128 aaKnown RBP0.06□□□□□ -2.4
PTPN12-214ENST00000520947 STAB1Q9NY15 2570 aa0.06□□□□□ -2.4
PTPN12-214ENST00000520947 ALMS1Q8TCU4 4167 aa0.06□□□□□ -2.4
PTPN12-214ENST00000520947 CREBBPQ92793 2442 aa0.06□□□□□ -2.4
PTPN12-214ENST00000520947 IQGAP3Q86VI3 1631 aa0.06□□□□□ -2.4
PTPN12-214ENST00000520947 DEFB131BA0A096LNP1 70 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms