RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 AEBP2Q6ZN18 517 aaPredicted RBP28.43■■■□□ 2.14
PTPN12-214ENST00000520947 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
PTPN12-214ENST00000520947 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
PTPN12-214ENST00000520947 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
PTPN12-214ENST00000520947 FOXD1Q16676 465 aa22.57■■□□□ 1.2
PTPN12-214ENST00000520947 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
PTPN12-214ENST00000520947 ADRA2BP18089 450 aa21.25■□□□□ 0.99
PTPN12-214ENST00000520947 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
PTPN12-214ENST00000520947 PIAS4Q8N2W9 510 aaPredicted RBP21.1■□□□□ 0.97
PTPN12-214ENST00000520947 MSH5O43196 834 aa21.02■□□□□ 0.96
PTPN12-214ENST00000520947 POTEDQ86YR6 584 aa20.4■□□□□ 0.86
PTPN12-214ENST00000520947 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
PTPN12-214ENST00000520947 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
PTPN12-214ENST00000520947 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
PTPN12-214ENST00000520947 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
PTPN12-214ENST00000520947 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
PTPN12-214ENST00000520947 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
PTPN12-214ENST00000520947 KCNA4P22459 653 aa18.85■□□□□ 0.61
PTPN12-214ENST00000520947 NPM3O75607 178 aaKnown RBP18.63■□□□□ 0.57
PTPN12-214ENST00000520947 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.56
PTPN12-214ENST00000520947 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
PTPN12-214ENST00000520947 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
PTPN12-214ENST00000520947 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
PTPN12-214ENST00000520947 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
PTPN12-214ENST00000520947 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
PTPN12-214ENST00000520947 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
PTPN12-214ENST00000520947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTPN12-214ENST00000520947 C1QBPQ07021 282 aaKnown RBP17.7■□□□□ 0.42
PTPN12-214ENST00000520947 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
PTPN12-214ENST00000520947 U3KPZ7 1027 aaPredicted RBP17.41■□□□□ 0.38
PTPN12-214ENST00000520947 FOXD4L1Q9NU39 408 aa17.35■□□□□ 0.37
PTPN12-214ENST00000520947 ZBTB22O15209 634 aa17.33■□□□□ 0.36
PTPN12-214ENST00000520947 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
PTPN12-214ENST00000520947 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
PTPN12-214ENST00000520947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
PTPN12-214ENST00000520947 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
PTPN12-214ENST00000520947 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
PTPN12-214ENST00000520947 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
PTPN12-214ENST00000520947 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
PTPN12-214ENST00000520947 CAPN15O75808 1086 aa17.01■□□□□ 0.31
PTPN12-214ENST00000520947 APLP2Q06481 763 aa16.95■□□□□ 0.3
PTPN12-214ENST00000520947 DSG3P32926 999 aa16.88■□□□□ 0.29
PTPN12-214ENST00000520947 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
PTPN12-214ENST00000520947 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
PTPN12-214ENST00000520947 ZNF219Q9P2Y4 722 aaPredicted RBP16.77■□□□□ 0.28
PTPN12-214ENST00000520947 ATXN8OSP0DMR3 200 aa16.71■□□□□ 0.27
PTPN12-214ENST00000520947 ABCB7O75027 752 aa16.65■□□□□ 0.26
PTPN12-214ENST00000520947 POLA2Q14181 598 aa16.51■□□□□ 0.23
PTPN12-214ENST00000520947 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
PTPN12-214ENST00000520947 FBLN2P98095 1184 aa16.07■□□□□ 0.16
PTPN12-214ENST00000520947 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
PTPN12-214ENST00000520947 MKRN4PQ13434 485 aaPredicted RBP16.04■□□□□ 0.16
PTPN12-214ENST00000520947 POTEHQ6S545 545 aa16■□□□□ 0.15
PTPN12-214ENST00000520947 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
PTPN12-214ENST00000520947 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
PTPN12-214ENST00000520947 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
PTPN12-214ENST00000520947 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
PTPN12-214ENST00000520947 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
PTPN12-214ENST00000520947 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
PTPN12-214ENST00000520947 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
PTPN12-214ENST00000520947 SPDYE4A6NLX3 237 aa15.6■□□□□ 0.09
PTPN12-214ENST00000520947 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
PTPN12-214ENST00000520947 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
PTPN12-214ENST00000520947 FKBP8Q14318 412 aa15.49■□□□□ 0.07
PTPN12-214ENST00000520947 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
PTPN12-214ENST00000520947 PITPNM1O00562 1244 aa15.44■□□□□ 0.06
PTPN12-214ENST00000520947 PIP4P2Q8N4L2 257 aa15.36■□□□□ 0.05
PTPN12-214ENST00000520947 CLEC11AQ9Y240 323 aa15.33■□□□□ 0.04
PTPN12-214ENST00000520947 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
PTPN12-214ENST00000520947 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
PTPN12-214ENST00000520947 PROM2Q8N271 834 aa15.24■□□□□ 0.03
PTPN12-214ENST00000520947 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
PTPN12-214ENST00000520947 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
PTPN12-214ENST00000520947 HAX1O00165 279 aa15.07■□□□□ 0
PTPN12-214ENST00000520947 PRKAR2AP13861 404 aaKnown RBP15.05■□□□□ -0
PTPN12-214ENST00000520947 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
PTPN12-214ENST00000520947 CHADLQ6NUI6 762 aa14.97□□□□□ -0.01
PTPN12-214ENST00000520947 EVX2Q03828 476 aa14.93□□□□□ -0.02
PTPN12-214ENST00000520947 FBXO3Q9UK99 471 aa14.92□□□□□ -0.02
PTPN12-214ENST00000520947 CREBZFQ9NS37 354 aa14.88□□□□□ -0.03
PTPN12-214ENST00000520947 MIER1Q8N108 512 aa14.84□□□□□ -0.03
PTPN12-214ENST00000520947 PLCD3Q8N3E9 789 aa14.8□□□□□ -0.04
PTPN12-214ENST00000520947 C19orf67A6NJJ6 358 aa14.78□□□□□ -0.04
PTPN12-214ENST00000520947 FARP1Q9Y4F1 1045 aaPredicted RBP14.76□□□□□ -0.05
PTPN12-214ENST00000520947 VASPP50552 380 aaPredicted RBP14.75□□□□□ -0.05
PTPN12-214ENST00000520947 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
PTPN12-214ENST00000520947 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
PTPN12-214ENST00000520947 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTPN12-214ENST00000520947 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
PTPN12-214ENST00000520947 ZBTB47Q9UFB7 747 aaPredicted RBP14.58□□□□□ -0.08
PTPN12-214ENST00000520947 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
PTPN12-214ENST00000520947 GABBR2O75899 941 aa14.56□□□□□ -0.08
PTPN12-214ENST00000520947 IFNLR1Q8IU57 520 aaPredicted RBP14.54□□□□□ -0.08
PTPN12-214ENST00000520947 RASEFQ8IZ41 740 aa14.44□□□□□ -0.1
PTPN12-214ENST00000520947 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
PTPN12-214ENST00000520947 ZRANB1Q9UGI0 708 aa14.44□□□□□ -0.1
PTPN12-214ENST00000520947 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
PTPN12-214ENST00000520947 NUBP1P53384 320 aa14.43□□□□□ -0.1
PTPN12-214ENST00000520947 SPOCK2Q92563 424 aa14.39□□□□□ -0.11
PTPN12-214ENST00000520947 DCAF8Q5TAQ9 597 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms