RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 MRPL55Q7Z7F7 128 aaKnown RBP17.01■□□□□ 0.31
COL13A1-210ENST00000517713 C16orf90A8MZG2 172 aa17■□□□□ 0.31
COL13A1-210ENST00000517713 PRYO14603 147 aa17■□□□□ 0.31
COL13A1-210ENST00000517713 SMCR5Q8TEV8 140 aa17■□□□□ 0.31
COL13A1-210ENST00000517713 LAMTOR3Q9UHA4 124 aa17■□□□□ 0.31
COL13A1-210ENST00000517713 A0A096LNI7 61 aa16.99■□□□□ 0.31
COL13A1-210ENST00000517713 LRCOL1A6NCL2 159 aa16.99■□□□□ 0.31
COL13A1-210ENST00000517713 GHRHP01286 108 aa16.99■□□□□ 0.31
COL13A1-210ENST00000517713 SDIM1Q6ZPB5 146 aa16.99■□□□□ 0.31
COL13A1-210ENST00000517713 CCKP06307 115 aa16.99■□□□□ 0.31
COL13A1-210ENST00000517713 Q6ZRN7 208 aaPredicted RBP16.99■□□□□ 0.31
COL13A1-210ENST00000517713 TENM2Q9NT68 2774 aa16.99■□□□□ 0.31
COL13A1-210ENST00000517713 RBM3P98179 157 aaKnown RBP16.96■□□□□ 0.31
COL13A1-210ENST00000517713 IGKV2-24A0A0C4DH68 120 aa16.95■□□□□ 0.3
COL13A1-210ENST00000517713 M0R2N4 97 aa16.95■□□□□ 0.3
COL13A1-210ENST00000517713 KRTAP21-3Q3LHN1 58 aa16.95■□□□□ 0.3
COL13A1-210ENST00000517713 STARD9Q9P2P6 4700 aa16.95■□□□□ 0.3
COL13A1-210ENST00000517713 LINC00643Q86TS7 51 aa16.94■□□□□ 0.3
COL13A1-210ENST00000517713 SPRR1AP35321 89 aa16.94■□□□□ 0.3
COL13A1-210ENST00000517713 KRTAP4-16G5E9R7 235 aaPredicted RBP16.93■□□□□ 0.3
COL13A1-210ENST00000517713 B5MCH6 92 aa16.91■□□□□ 0.3
COL13A1-210ENST00000517713 ETDCA0A1B0GVM5 59 aa16.91■□□□□ 0.3
COL13A1-210ENST00000517713 Q6Q795 121 aa16.91■□□□□ 0.3
COL13A1-210ENST00000517713 Q6ZRX8 168 aa16.91■□□□□ 0.3
COL13A1-210ENST00000517713 LINC00846Q9NV44 126 aa16.9■□□□□ 0.3
COL13A1-210ENST00000517713 A0A1W2PNN7 141 aa16.89■□□□□ 0.29
COL13A1-210ENST00000517713 C9orf163Q8N9P6 203 aa16.89■□□□□ 0.29
COL13A1-210ENST00000517713 DHRS4-AS1Q9P1J3 65 aa16.89■□□□□ 0.29
COL13A1-210ENST00000517713 LOC110117498A0A087WWA1 95 aa16.88■□□□□ 0.29
COL13A1-210ENST00000517713 Q6ZQT0 140 aa16.87■□□□□ 0.29
COL13A1-210ENST00000517713 DSCR8Q96T75 97 aa16.86■□□□□ 0.29
COL13A1-210ENST00000517713 VPS13DQ5THJ4 4388 aa16.86■□□□□ 0.29
COL13A1-210ENST00000517713 TRBV7-7A0A0K0K1E9 115 aa16.86■□□□□ 0.29
COL13A1-210ENST00000517713 NDUFV3P56181 108 aaKnown RBP16.86■□□□□ 0.29
COL13A1-210ENST00000517713 REG3GQ6UW15 175 aa16.84■□□□□ 0.29
COL13A1-210ENST00000517713 Q9BRP9 147 aa16.84■□□□□ 0.29
COL13A1-210ENST00000517713 PKIGQ9Y2B9 76 aa16.84■□□□□ 0.29
COL13A1-210ENST00000517713 CHTF8P0CG12 524 aa16.82■□□□□ 0.28
COL13A1-210ENST00000517713 PDE6GP18545 87 aa16.81■□□□□ 0.28
COL13A1-210ENST00000517713 Q6ZR54 194 aa16.8■□□□□ 0.28
COL13A1-210ENST00000517713 IMUPQ9GZP8 106 aa16.79■□□□□ 0.28
COL13A1-210ENST00000517713 DEFB105AQ8NG35 78 aa16.79■□□□□ 0.28
COL13A1-210ENST00000517713 TRBV7-4A0A0J9YYF1 115 aa16.77■□□□□ 0.28
COL13A1-210ENST00000517713 Q8N377 158 aa16.77■□□□□ 0.27
COL13A1-210ENST00000517713 A0A087WTM6 91 aa16.76■□□□□ 0.27
COL13A1-210ENST00000517713 LINC01547P58512 204 aaPredicted RBP16.75■□□□□ 0.27
COL13A1-210ENST00000517713 UBE2BP63146 152 aa16.75■□□□□ 0.27
COL13A1-210ENST00000517713 LINC00474Q9P2X8 69 aa16.75■□□□□ 0.27
COL13A1-210ENST00000517713 Q6JHZ5 121 aa16.74■□□□□ 0.27
COL13A1-210ENST00000517713 PHF5AQ7RTV0 110 aaKnown RBP16.72■□□□□ 0.27
COL13A1-210ENST00000517713 ERC2-IT1O76042 136 aa16.71■□□□□ 0.27
COL13A1-210ENST00000517713 ST20-AS1Q8NBB2 130 aa16.7■□□□□ 0.26
COL13A1-210ENST00000517713 UBL5Q9BZL1 73 aa16.69■□□□□ 0.26
COL13A1-210ENST00000517713 IGKV3D-7A0A0C4DH55 119 aa16.69■□□□□ 0.26
COL13A1-210ENST00000517713 FAM19A1Q7Z5A9 133 aa16.69■□□□□ 0.26
COL13A1-210ENST00000517713 IGLV5-48A0A075B6I7 105 aa16.68■□□□□ 0.26
COL13A1-210ENST00000517713 FBN3Q75N90 2809 aa16.67■□□□□ 0.26
COL13A1-210ENST00000517713 LY6G6CO95867 125 aa16.67■□□□□ 0.26
COL13A1-210ENST00000517713 PANO1I0J062 215 aa16.66■□□□□ 0.26
COL13A1-210ENST00000517713 ANAPC13Q9BS18 74 aa16.65■□□□□ 0.26
COL13A1-210ENST00000517713 C1orf134Q5TEV5 83 aa16.65■□□□□ 0.26
COL13A1-210ENST00000517713 KRTAP11-1Q8IUC1 163 aa16.65■□□□□ 0.26
COL13A1-210ENST00000517713 DPH3Q96FX2 82 aa16.64■□□□□ 0.25
COL13A1-210ENST00000517713 PRLHP81277 87 aa16.63■□□□□ 0.25
COL13A1-210ENST00000517713 WWC2-AS2Q96NR7 200 aa16.63■□□□□ 0.25
COL13A1-210ENST00000517713 C3orf22Q8N5N4 141 aa16.63■□□□□ 0.25
COL13A1-210ENST00000517713 SPACA4Q8TDM5 124 aa16.61■□□□□ 0.25
COL13A1-210ENST00000517713 RTL8CO15255 209 aa16.6■□□□□ 0.25
COL13A1-210ENST00000517713 ATP5EP2Q5VTU8 51 aa16.6■□□□□ 0.25
COL13A1-210ENST00000517713 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.6■□□□□ 0.25
COL13A1-210ENST00000517713 FAM236AA0A1B0GUQ0 79 aa16.59■□□□□ 0.25
COL13A1-210ENST00000517713 FAM236BA0A1B0GV22 79 aa16.59■□□□□ 0.25
COL13A1-210ENST00000517713 FUSP35637 526 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL13A1-210ENST00000517713 KMT2AQ03164 3969 aa16.58■□□□□ 0.25
COL13A1-210ENST00000517713 LINC00476Q8WZB0 136 aa16.57■□□□□ 0.24
COL13A1-210ENST00000517713 Q6ZVQ6 151 aa16.57■□□□□ 0.24
COL13A1-210ENST00000517713 HIGD2AQ9BW72 106 aa16.56■□□□□ 0.24
COL13A1-210ENST00000517713 TNP2Q05952 138 aa16.55■□□□□ 0.24
COL13A1-210ENST00000517713 EPM2AB3EWF7 344 aa16.54■□□□□ 0.24
COL13A1-210ENST00000517713 H0Y9J4 135 aa16.54■□□□□ 0.24
COL13A1-210ENST00000517713 SMIM29Q86T20 159 aa16.51■□□□□ 0.23
COL13A1-210ENST00000517713 DNAH2Q9P225 4427 aa16.5■□□□□ 0.23
COL13A1-210ENST00000517713 C1orf137Q5JT78 98 aa16.49■□□□□ 0.23
COL13A1-210ENST00000517713 IGLV5-52A0A0A0MRZ9 124 aa16.48■□□□□ 0.23
COL13A1-210ENST00000517713 UBE2AP49459 152 aa16.48■□□□□ 0.23
COL13A1-210ENST00000517713 HIST1H4AP62805 103 aaKnown RBP16.48■□□□□ 0.23
COL13A1-210ENST00000517713 HAMPP81172 84 aa16.48■□□□□ 0.23
COL13A1-210ENST00000517713 A0A087WVE0 104 aa16.47■□□□□ 0.23
COL13A1-210ENST00000517713 BCE1O60756 84 aa16.46■□□□□ 0.23
COL13A1-210ENST00000517713 HECTD4Q9Y4D8 3996 aa16.45■□□□□ 0.22
COL13A1-210ENST00000517713 TGP01266 2768 aa16.43■□□□□ 0.22
COL13A1-210ENST00000517713 F8WEM9 126 aa16.43■□□□□ 0.22
COL13A1-210ENST00000517713 A0A1W2PNM2 257 aa16.42■□□□□ 0.22
COL13A1-210ENST00000517713 C3orf84H3BNL1 204 aa16.42■□□□□ 0.22
COL13A1-210ENST00000517713 DNAH6Q9C0G6 4158 aa16.42■□□□□ 0.22
COL13A1-210ENST00000517713 CXCL6P80162 114 aa16.41■□□□□ 0.22
COL13A1-210ENST00000517713 DNAH17Q9UFH2 4485 aa16.4■□□□□ 0.22
COL13A1-210ENST00000517713 A0A1B0GW54 56 aa16.4■□□□□ 0.22
COL13A1-210ENST00000517713 KRTAP13-1Q8IUC0 172 aa16.4■□□□□ 0.22
COL13A1-210ENST00000517713 Q8NBF4 154 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms