RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-27P-201ENST00000516146 ARHGAP35Q9NRY4 1499 aa0.22□□□□□ -2.37
RNU6-27P-201ENST00000516146 ARFGEF2Q9Y6D5 1785 aa0.22□□□□□ -2.37
RNU6-27P-201ENST00000516146 DIP2BQ9P265 1576 aa0.22□□□□□ -2.37
RNU6-27P-201ENST00000516146 ERVK-7P63135 1459 aa0.22□□□□□ -2.37
RNU6-27P-201ENST00000516146 SCN11AQ9UI33 1791 aa0.22□□□□□ -2.37
RNU6-27P-201ENST00000516146 DOT1LQ8TEK3 1739 aa0.21□□□□□ -2.38
RNU6-27P-201ENST00000516146 SSPOA2VEC9 5147 aa0.21□□□□□ -2.38
RNU6-27P-201ENST00000516146 APC2O95996 2303 aa0.21□□□□□ -2.38
RNU6-27P-201ENST00000516146 CACNA1AO00555 2505 aa0.21□□□□□ -2.38
RNU6-27P-201ENST00000516146 PRM1P04553 51 aa0.21□□□□□ -2.38
RNU6-27P-201ENST00000516146 COX6B2Q6YFQ2 88 aa0.21□□□□□ -2.38
RNU6-27P-201ENST00000516146 KNL1Q8NG31 2342 aa0.21□□□□□ -2.38
RNU6-27P-201ENST00000516146 DCHS2Q6V1P9 2916 aa0.2□□□□□ -2.38
RNU6-27P-201ENST00000516146 ATP5EP2Q5VTU8 51 aa0.2□□□□□ -2.38
RNU6-27P-201ENST00000516146 EP300Q09472 2414 aaPredicted RBP0.2□□□□□ -2.38
RNU6-27P-201ENST00000516146 NCOA2Q15596 1464 aa0.2□□□□□ -2.38
RNU6-27P-201ENST00000516146 RYR1P21817 5038 aa0.2□□□□□ -2.38
RNU6-27P-201ENST00000516146 CEP170BQ9Y4F5 1589 aaPredicted RBP0.19□□□□□ -2.38
RNU6-27P-201ENST00000516146 KDM5DQ9BY66 1539 aa0.19□□□□□ -2.38
RNU6-27P-201ENST00000516146 TNRC6CQ9HCJ0 1690 aaKnown RBP0.19□□□□□ -2.38
RNU6-27P-201ENST00000516146 H3BUT2 72 aa0.19□□□□□ -2.38
RNU6-27P-201ENST00000516146 KMT2CQ8NEZ4 4911 aaKnown RBP0.19□□□□□ -2.38
RNU6-27P-201ENST00000516146 UBR4Q5T4S7 5183 aa0.19□□□□□ -2.38
RNU6-27P-201ENST00000516146 FAT2Q9NYQ8 4349 aa0.19□□□□□ -2.38
RNU6-27P-201ENST00000516146 ABCC1P33527 1531 aa0.18□□□□□ -2.38
RNU6-27P-201ENST00000516146 MAGI3Q5TCQ9 1506 aa0.18□□□□□ -2.38
RNU6-27P-201ENST00000516146 ZNF831Q5JPB2 1677 aa0.18□□□□□ -2.38
RNU6-27P-201ENST00000516146 FLNCQ14315 2725 aa0.18□□□□□ -2.38
RNU6-27P-201ENST00000516146 USP32Q8NFA0 1604 aa0.18□□□□□ -2.38
RNU6-27P-201ENST00000516146 UMAD1C9J7I0 102 aa0.18□□□□□ -2.38
RNU6-27P-201ENST00000516146 SPRR2DP22532 72 aa0.18□□□□□ -2.38
RNU6-27P-201ENST00000516146 DEFB121Q5J5C9 76 aa0.18□□□□□ -2.38
RNU6-27P-201ENST00000516146 BSNQ9UPA5 3926 aa0.18□□□□□ -2.38
RNU6-27P-201ENST00000516146 M0R2T5 61 aa0.17□□□□□ -2.38
RNU6-27P-201ENST00000516146 KMT2AQ03164 3969 aa0.17□□□□□ -2.38
RNU6-27P-201ENST00000516146 NWD1Q149M9 1564 aa0.17□□□□□ -2.38
RNU6-27P-201ENST00000516146 WFDC13Q8IUB5 93 aa0.17□□□□□ -2.38
RNU6-27P-201ENST00000516146 NESP48681 1621 aa0.16□□□□□ -2.38
RNU6-27P-201ENST00000516146 FLNAP21333 2647 aaKnown RBP0.16□□□□□ -2.38
RNU6-27P-201ENST00000516146 A0A087WXM4 84 aa0.16□□□□□ -2.38
RNU6-27P-201ENST00000516146 IFI27P40305 119 aaPredicted RBP0.16□□□□□ -2.38
RNU6-27P-201ENST00000516146 BVES-AS1Q5T3Y7 98 aa0.16□□□□□ -2.38
RNU6-27P-201ENST00000516146 C4AP0C0L4 1744 aa0.16□□□□□ -2.38
RNU6-27P-201ENST00000516146 C4BP0C0L5 1744 aa0.16□□□□□ -2.38
RNU6-27P-201ENST00000516146 CFAP74Q9C0B2 1584 aa0.15□□□□□ -2.38
RNU6-27P-201ENST00000516146 SETXQ7Z333 2677 aaKnown RBP0.15□□□□□ -2.39
RNU6-27P-201ENST00000516146 CFAP43Q8NDM7 1665 aa0.15□□□□□ -2.39
RNU6-27P-201ENST00000516146 TNXBP22105 4242 aa0.15□□□□□ -2.39
RNU6-27P-201ENST00000516146 LELP1Q5T871 98 aa0.15□□□□□ -2.39
RNU6-27P-201ENST00000516146 PTPN23Q9H3S7 1636 aa0.15□□□□□ -2.39
RNU6-27P-201ENST00000516146 CCDC88BA6NC98 1476 aa0.15□□□□□ -2.39
RNU6-27P-201ENST00000516146 RYR2Q92736 4967 aa0.14□□□□□ -2.39
RNU6-27P-201ENST00000516146 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
RNU6-27P-201ENST00000516146 PDE4DIPQ5VU43 2346 aa0.14□□□□□ -2.39
RNU6-27P-201ENST00000516146 DDX60LQ5H9U9 1706 aaKnown RBP0.13□□□□□ -2.39
RNU6-27P-201ENST00000516146 IFI6P09912 130 aa0.13□□□□□ -2.39
RNU6-27P-201ENST00000516146 HMGA1P17096 107 aaKnown RBP0.13□□□□□ -2.39
RNU6-27P-201ENST00000516146 KIAA1109Q2LD37 5005 aa0.13□□□□□ -2.39
RNU6-27P-201ENST00000516146 REV3LO60673 3130 aa0.13□□□□□ -2.39
RNU6-27P-201ENST00000516146 FLNBO75369 2602 aaKnown RBP0.12□□□□□ -2.39
RNU6-27P-201ENST00000516146 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
RNU6-27P-201ENST00000516146 NDUFA3O95167 84 aa0.12□□□□□ -2.39
RNU6-27P-201ENST00000516146 SMIM13P0DJ93 91 aa0.12□□□□□ -2.39
RNU6-27P-201ENST00000516146 PRKDCP78527 4128 aaKnown RBP0.12□□□□□ -2.39
RNU6-27P-201ENST00000516146 RRBP1Q9P2E9 1410 aaKnown RBP0.12□□□□□ -2.39
RNU6-27P-201ENST00000516146 PLCH1Q4KWH8 1693 aa0.11□□□□□ -2.39
RNU6-27P-201ENST00000516146 ANKHD1Q8IWZ3 2542 aaKnown RBP0.11□□□□□ -2.39
RNU6-27P-201ENST00000516146 DEFB135Q30KP9 77 aa0.11□□□□□ -2.39
RNU6-27P-201ENST00000516146 C18orf32Q8TCD1 76 aa0.11□□□□□ -2.39
RNU6-27P-201ENST00000516146 LPAP08519 4548 aa0.1□□□□□ -2.39
RNU6-27P-201ENST00000516146 NREPQ16612 68 aa0.1□□□□□ -2.39
RNU6-27P-201ENST00000516146 STAB1Q9NY15 2570 aa0.1□□□□□ -2.39
RNU6-27P-201ENST00000516146 ANKARQ7Z5J8 1434 aa0.1□□□□□ -2.39
RNU6-27P-201ENST00000516146 NSD1Q96L73 2696 aaPredicted RBP0.1□□□□□ -2.39
RNU6-27P-201ENST00000516146 ACANP16112 2415 aa0.09□□□□□ -2.39
RNU6-27P-201ENST00000516146 HMCN2Q8NDA2 5059 aa0.09□□□□□ -2.39
RNU6-27P-201ENST00000516146 RNF213Q63HN8 5207 aa0.09□□□□□ -2.39
RNU6-27P-201ENST00000516146 C3orf79P0CE67 100 aa0.09□□□□□ -2.4
RNU6-27P-201ENST00000516146 KRTAP20-1Q3LI63 56 aa0.09□□□□□ -2.4
RNU6-27P-201ENST00000516146 ALMS1Q8TCU4 4167 aa0.09□□□□□ -2.4
RNU6-27P-201ENST00000516146 LCE6AA0A183 80 aa0.08□□□□□ -2.4
RNU6-27P-201ENST00000516146 ZANQ9Y493 2812 aa0.08□□□□□ -2.4
RNU6-27P-201ENST00000516146 SPTBN4Q9H254 2564 aa0.07□□□□□ -2.4
RNU6-27P-201ENST00000516146 TRANK1O15050 2925 aa0.07□□□□□ -2.4
RNU6-27P-201ENST00000516146 NDUFA4O00483 81 aa0.07□□□□□ -2.4
RNU6-27P-201ENST00000516146 PRO3102Q9H379 93 aa0.07□□□□□ -2.4
RNU6-27P-201ENST00000516146 RICTORQ6R327 1708 aa0.07□□□□□ -2.4
RNU6-27P-201ENST00000516146 ABCA8O94911 1581 aa0.06□□□□□ -2.4
RNU6-27P-201ENST00000516146 CICQ96RK0 1608 aaPredicted RBP0.06□□□□□ -2.4
RNU6-27P-201ENST00000516146 SPRR2BP35325 72 aa0.06□□□□□ -2.4
RNU6-27P-201ENST00000516146 MAP3K1Q13233 1512 aa0.06□□□□□ -2.4
RNU6-27P-201ENST00000516146 SONP18583 2426 aaKnown RBP0.05□□□□□ -2.4
RNU6-27P-201ENST00000516146 PCNX1Q96RV3 2341 aa0.05□□□□□ -2.4
RNU6-27P-201ENST00000516146 NBASA2RRP1 2371 aa0.05□□□□□ -2.4
RNU6-27P-201ENST00000516146 ANKRD50Q9ULJ7 1429 aa0.04□□□□□ -2.4
RNU6-27P-201ENST00000516146 LRRIQ1Q96JM4 1722 aa0.04□□□□□ -2.4
RNU6-27P-201ENST00000516146 HSPG2P98160 4391 aa0.04□□□□□ -2.4
RNU6-27P-201ENST00000516146 LINC00158P58513 81 aa0.03□□□□□ -2.4
RNU6-27P-201ENST00000516146 ITSN1Q15811 1721 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms