RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 TNRC6CQ9HCJ0 1690 aaKnown RBP2.64□□□□□ -1.99
CHD1-208ENST00000512392 CACNA1EQ15878 2313 aa2.64□□□□□ -1.99
CHD1-208ENST00000512392 I3L2K1 104 aa2.63□□□□□ -1.99
CHD1-208ENST00000512392 DUOX1Q9NRD9 1551 aa2.63□□□□□ -1.99
CHD1-208ENST00000512392 FLG2Q5D862 2391 aaPredicted RBP2.63□□□□□ -1.99
CHD1-208ENST00000512392 AHCTF1Q8WYP5 2266 aa2.63□□□□□ -1.99
CHD1-208ENST00000512392 K7EIL1 84 aa2.62□□□□□ -1.99
CHD1-208ENST00000512392 CDKN2A-AS1Q9UH64 79 aa2.62□□□□□ -1.99
CHD1-208ENST00000512392 FBN1P35555 2871 aaKnown RBP2.6□□□□□ -1.99
CHD1-208ENST00000512392 K7EQZ3 153 aa2.6□□□□□ -1.99
CHD1-208ENST00000512392 LYNX1P0DP58 116 aa2.6□□□□□ -1.99
CHD1-208ENST00000512392 MRPL33O75394 65 aaKnown RBP2.6□□□□□ -1.99
CHD1-208ENST00000512392 TP53AIP1Q9HCN2 124 aa2.6□□□□□ -1.99
CHD1-208ENST00000512392 SRCAPQ6ZRS2 3230 aa2.59□□□□□ -1.99
CHD1-208ENST00000512392 H0YGX0 51 aa2.59□□□□□ -2
CHD1-208ENST00000512392 LINC00158P58513 81 aa2.59□□□□□ -2
CHD1-208ENST00000512392 UTRNP46939 3433 aa2.58□□□□□ -2
CHD1-208ENST00000512392 PRB3Q04118 309 aaPredicted RBP2.58□□□□□ -2
CHD1-208ENST00000512392 PCNTO95613 3336 aa2.57□□□□□ -2
CHD1-208ENST00000512392 MRPL34Q9BQ48 92 aaKnown RBP2.57□□□□□ -2
CHD1-208ENST00000512392 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
CHD1-208ENST00000512392 FAM208BQ5VWN6 2430 aa2.57□□□□□ -2
CHD1-208ENST00000512392 SNRPGP62308 76 aaKnown RBP2.56□□□□□ -2
CHD1-208ENST00000512392 DEFB123Q8N688 67 aa2.56□□□□□ -2
CHD1-208ENST00000512392 PIEZO2Q9H5I5 2752 aa2.56□□□□□ -2
CHD1-208ENST00000512392 CNOT1A5YKK6 2376 aaKnown RBP2.56□□□□□ -2
CHD1-208ENST00000512392 LCE3AQ5TA76 89 aa2.56□□□□□ -2
CHD1-208ENST00000512392 NAV3Q8IVL0 2385 aa2.55□□□□□ -2
CHD1-208ENST00000512392 LELP1Q5T871 98 aa2.55□□□□□ -2
CHD1-208ENST00000512392 CNTRLQ7Z7A1 2325 aa2.55□□□□□ -2
CHD1-208ENST00000512392 FXYD6P3P58550 94 aa2.54□□□□□ -2
CHD1-208ENST00000512392 Q8IZM0 81 aa2.54□□□□□ -2
CHD1-208ENST00000512392 TFF3Q07654 80 aa2.53□□□□□ -2
CHD1-208ENST00000512392 REV3LO60673 3130 aa2.52□□□□□ -2.01
CHD1-208ENST00000512392 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
CHD1-208ENST00000512392 CENPFP49454 3210 aa2.52□□□□□ -2.01
CHD1-208ENST00000512392 SORL1Q92673 2214 aa2.51□□□□□ -2.01
CHD1-208ENST00000512392 COX6A2Q02221 97 aa2.51□□□□□ -2.01
CHD1-208ENST00000512392 OTOGLQ3ZCN5 2332 aa2.51□□□□□ -2.01
CHD1-208ENST00000512392 H0YAA0 97 aa2.5□□□□□ -2.01
CHD1-208ENST00000512392 PIGYQ3MUY2 71 aa2.5□□□□□ -2.01
CHD1-208ENST00000512392 LINC00308Q8TCZ7 52 aa2.5□□□□□ -2.01
CHD1-208ENST00000512392 DNAH12Q6ZR08 3092 aa2.49□□□□□ -2.01
CHD1-208ENST00000512392 USMG5Q96IX5 58 aa2.49□□□□□ -2.01
CHD1-208ENST00000512392 CEP350Q5VT06 3117 aa2.47□□□□□ -2.01
CHD1-208ENST00000512392 BRCA2P51587 3418 aa2.47□□□□□ -2.01
CHD1-208ENST00000512392 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
CHD1-208ENST00000512392 COL6A6A6NMZ7 2263 aa2.44□□□□□ -2.02
CHD1-208ENST00000512392 PRO0255Q9UI72 69 aa2.44□□□□□ -2.02
CHD1-208ENST00000512392 KRTAP13-1Q8IUC0 172 aa2.43□□□□□ -2.02
CHD1-208ENST00000512392 TMEM167BQ9NRX6 74 aa2.43□□□□□ -2.02
CHD1-208ENST00000512392 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
CHD1-208ENST00000512392 CNFNQ9BYD5 112 aa2.43□□□□□ -2.02
CHD1-208ENST00000512392 LYNX1G3V0Z9 82 aa2.42□□□□□ -2.02
CHD1-208ENST00000512392 COX6B2Q6YFQ2 88 aa2.42□□□□□ -2.02
CHD1-208ENST00000512392 ASH1LQ9NR48 2969 aaKnown RBP2.42□□□□□ -2.02
CHD1-208ENST00000512392 HTTP42858 3142 aa2.42□□□□□ -2.02
CHD1-208ENST00000512392 DOPEY2Q9Y3R5 2298 aa2.41□□□□□ -2.02
CHD1-208ENST00000512392 LAMA3Q16787 3333 aa2.41□□□□□ -2.02
CHD1-208ENST00000512392 LAMA2P24043 3122 aaKnown RBP2.41□□□□□ -2.02
CHD1-208ENST00000512392 MINOS1Q5TGZ0 78 aa2.4□□□□□ -2.02
CHD1-208ENST00000512392 DEFB119Q8N690 84 aa2.39□□□□□ -2.03
CHD1-208ENST00000512392 CCL22O00626 93 aa2.38□□□□□ -2.03
CHD1-208ENST00000512392 SPRR1AP35321 89 aa2.38□□□□□ -2.03
CHD1-208ENST00000512392 APLNQ9ULZ1 77 aa2.38□□□□□ -2.03
CHD1-208ENST00000512392 NOTCH2Q04721 2471 aa2.37□□□□□ -2.03
CHD1-208ENST00000512392 MKI67P46013 3256 aaKnown RBP2.37□□□□□ -2.03
CHD1-208ENST00000512392 H1FX-AS1Q4G0G2 97 aa2.36□□□□□ -2.03
CHD1-208ENST00000512392 C6orf48Q9UBA6 75 aa2.36□□□□□ -2.03
CHD1-208ENST00000512392 PLCE1Q9P212 2302 aa2.36□□□□□ -2.03
CHD1-208ENST00000512392 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
CHD1-208ENST00000512392 Q6ZSA8 131 aa2.36□□□□□ -2.03
CHD1-208ENST00000512392 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
CHD1-208ENST00000512392 ALMS1Q8TCU4 4167 aa2.36□□□□□ -2.03
CHD1-208ENST00000512392 PDE4DIPQ5VU43 2346 aa2.34□□□□□ -2.03
CHD1-208ENST00000512392 SMIM2Q9BVW6 85 aa2.34□□□□□ -2.03
CHD1-208ENST00000512392 C5orf42Q9H799 3197 aa2.34□□□□□ -2.03
CHD1-208ENST00000512392 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.04
CHD1-208ENST00000512392 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.04
CHD1-208ENST00000512392 TRIOBPQ9H2D6 2365 aa2.34□□□□□ -2.04
CHD1-208ENST00000512392 CDH23Q9H251 3354 aa2.33□□□□□ -2.04
CHD1-208ENST00000512392 PTPRZ1P23471 2315 aaPredicted RBP2.32□□□□□ -2.04
CHD1-208ENST00000512392 IAPPP10997 89 aa2.31□□□□□ -2.04
CHD1-208ENST00000512392 SPINK9Q5DT21 86 aa2.31□□□□□ -2.04
CHD1-208ENST00000512392 USP34Q70CQ2 3546 aa2.31□□□□□ -2.04
CHD1-208ENST00000512392 A0A0D9SG42 100 aa2.3□□□□□ -2.04
CHD1-208ENST00000512392 NDUFA1O15239 70 aa2.3□□□□□ -2.04
CHD1-208ENST00000512392 DEFB130BP0DP73 79 aa2.3□□□□□ -2.04
CHD1-208ENST00000512392 DEFB130AP0DP74 79 aa2.3□□□□□ -2.04
CHD1-208ENST00000512392 DEFB105AQ8NG35 78 aa2.3□□□□□ -2.04
CHD1-208ENST00000512392 WFDC13Q8IUB5 93 aa2.3□□□□□ -2.04
CHD1-208ENST00000512392 UNC80Q8N2C7 3258 aa2.29□□□□□ -2.04
CHD1-208ENST00000512392 PTPRQQ9UMZ3 2332 aa2.29□□□□□ -2.04
CHD1-208ENST00000512392 CHD7Q9P2D1 2997 aa2.29□□□□□ -2.04
CHD1-208ENST00000512392 XIRP2A4UGR9 3374 aa2.29□□□□□ -2.04
CHD1-208ENST00000512392 C2CD3Q4AC94 2353 aa2.29□□□□□ -2.04
CHD1-208ENST00000512392 RPS27P42677 84 aaKnown RBP2.29□□□□□ -2.04
CHD1-208ENST00000512392 RPS27LQ71UM5 84 aaKnown RBP2.29□□□□□ -2.04
CHD1-208ENST00000512392 DEFB106AQ8N104 65 aa2.29□□□□□ -2.04
CHD1-208ENST00000512392 EYSQ5T1H1 3165 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms