RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TRBV7-4A0A0J9YYF1 115 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 A0A1B0GU69 56 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 LINC00959A0A1B0GUT2 108 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 CEBPZOSA8MTT3 80 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 GNGT1P63211 74 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 COX6A2Q02221 97 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 DEFB123Q8N688 67 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 TP53AIP1Q9HCN2 124 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 LRBAP50851 2863 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 LAMA3Q16787 3333 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 CELSR2Q9HCU4 2923 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 NCOA2Q15596 1464 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 NHSL1Q5SYE7 1610 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 HIVEP1P15822 2718 aa0.59□□□□□ -2.31
SSR3-208ENST00000496050 IGF2RP11717 2491 aa0.59□□□□□ -2.31
SSR3-208ENST00000496050 KNDC1Q76NI1 1749 aa0.59□□□□□ -2.31
SSR3-208ENST00000496050 SAMD9Q5K651 1589 aa0.59□□□□□ -2.31
SSR3-208ENST00000496050 DIP2BQ9P265 1576 aa0.59□□□□□ -2.31
SSR3-208ENST00000496050 H3BUT2 72 aa0.59□□□□□ -2.31
SSR3-208ENST00000496050 C18orf32Q8TCD1 76 aa0.59□□□□□ -2.31
SSR3-208ENST00000496050 ITPR2Q14571 2701 aa0.59□□□□□ -2.32
SSR3-208ENST00000496050 ACANP16112 2415 aa0.59□□□□□ -2.32
SSR3-208ENST00000496050 TARBP1Q13395 1621 aaKnown RBP0.59□□□□□ -2.32
SSR3-208ENST00000496050 ATP7BP35670 1465 aa0.59□□□□□ -2.32
SSR3-208ENST00000496050 MUC3AQ02505 3323 aa0.59□□□□□ -2.32
SSR3-208ENST00000496050 BRCA2P51587 3418 aa0.58□□□□□ -2.32
SSR3-208ENST00000496050 XRN1Q8IZH2 1706 aaKnown RBP0.58□□□□□ -2.32
SSR3-208ENST00000496050 COL7A1Q02388 2944 aa0.58□□□□□ -2.32
SSR3-208ENST00000496050 ABCC1P33527 1531 aa0.58□□□□□ -2.32
SSR3-208ENST00000496050 NBPF19A0A087WUL8 3843 aa0.58□□□□□ -2.32
SSR3-208ENST00000496050 A0A0G2JMZ2 1700 aa0.58□□□□□ -2.32
SSR3-208ENST00000496050 HTTP42858 3142 aa0.58□□□□□ -2.32
SSR3-208ENST00000496050 SETBP1Q9Y6X0 1596 aa0.57□□□□□ -2.32
SSR3-208ENST00000496050 FAM186AA6NE01 2351 aa0.57□□□□□ -2.32
SSR3-208ENST00000496050 ANKARQ7Z5J8 1434 aa0.57□□□□□ -2.32
SSR3-208ENST00000496050 CFAP54Q96N23 3096 aa0.57□□□□□ -2.32
SSR3-208ENST00000496050 A0A1B0GUT8 65 aa0.57□□□□□ -2.32
SSR3-208ENST00000496050 SUPT6HQ7KZ85 1726 aaKnown RBP0.56□□□□□ -2.32
SSR3-208ENST00000496050 CRYBG1Q9Y4K1 1723 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 KMT2AQ03164 3969 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 USP34Q70CQ2 3546 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 PAPPA2Q9BXP8 1791 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 SLIT1O75093 1534 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 PIGYQ3MUY2 71 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 NF1P21359 2839 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 CFAP74Q9C0B2 1584 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 TMEM131LA2VDJ0 1609 aa0.56□□□□□ -2.32
SSR3-208ENST00000496050 CEP290O15078 2479 aa0.55□□□□□ -2.32
SSR3-208ENST00000496050 UTRNP46939 3433 aa0.55□□□□□ -2.32
SSR3-208ENST00000496050 Q8IZM0 81 aa0.55□□□□□ -2.32
SSR3-208ENST00000496050 SMCO4Q9NRQ5 59 aa0.55□□□□□ -2.32
SSR3-208ENST00000496050 PRO0255Q9UI72 69 aa0.55□□□□□ -2.32
SSR3-208ENST00000496050 PAPPAQ13219 1627 aa0.55□□□□□ -2.32
SSR3-208ENST00000496050 ALKQ9UM73 1620 aa0.55□□□□□ -2.32
SSR3-208ENST00000496050 WDR87Q6ZQQ6 2873 aa0.55□□□□□ -2.32
SSR3-208ENST00000496050 CCDC88BA6NC98 1476 aa0.54□□□□□ -2.32
SSR3-208ENST00000496050 PTPRZ1P23471 2315 aaPredicted RBP0.54□□□□□ -2.32
SSR3-208ENST00000496050 PTPN23Q9H3S7 1636 aa0.54□□□□□ -2.32
SSR3-208ENST00000496050 C5P01031 1676 aa0.54□□□□□ -2.32
SSR3-208ENST00000496050 CFDP00746 253 aaPredicted RBP0.54□□□□□ -2.32
SSR3-208ENST00000496050 ATP5EP2Q5VTU8 51 aa0.54□□□□□ -2.32
SSR3-208ENST00000496050 NKTRP30414 1462 aaKnown RBP0.54□□□□□ -2.32
SSR3-208ENST00000496050 TRAV21A0A0B4J279 112 aa0.53□□□□□ -2.32
SSR3-208ENST00000496050 K7EQZ3 153 aa0.53□□□□□ -2.32
SSR3-208ENST00000496050 PDCD5O14737 125 aa0.53□□□□□ -2.32
SSR3-208ENST00000496050 NDUFB1O75438 58 aa0.53□□□□□ -2.32
SSR3-208ENST00000496050 SMIM13P0DJ93 91 aa0.53□□□□□ -2.32
SSR3-208ENST00000496050 DEFB112Q30KQ8 113 aa0.53□□□□□ -2.32
SSR3-208ENST00000496050 USMG5Q96IX5 58 aa0.53□□□□□ -2.32
SSR3-208ENST00000496050 URB2Q14146 1524 aaKnown RBP0.53□□□□□ -2.33
SSR3-208ENST00000496050 ABCA8O94911 1581 aa0.53□□□□□ -2.33
SSR3-208ENST00000496050 SPTA1P02549 2419 aa0.53□□□□□ -2.33
SSR3-208ENST00000496050 USH2AO75445 5202 aa0.52□□□□□ -2.33
SSR3-208ENST00000496050 FRYLO94915 3013 aa0.52□□□□□ -2.33
SSR3-208ENST00000496050 MUC12Q9UKN1 5478 aa0.52□□□□□ -2.33
SSR3-208ENST00000496050 PLCE1Q9P212 2302 aa0.52□□□□□ -2.33
SSR3-208ENST00000496050 SPTBN2O15020 2390 aa0.52□□□□□ -2.33
SSR3-208ENST00000496050 Q5VSD8 79 aa0.52□□□□□ -2.33
SSR3-208ENST00000496050 CCDC141Q6ZP82 1450 aa0.52□□□□□ -2.33
SSR3-208ENST00000496050 DMXL2Q8TDJ6 3036 aa0.52□□□□□ -2.33
SSR3-208ENST00000496050 LRRC37AA6NMS7 1700 aa0.52□□□□□ -2.33
SSR3-208ENST00000496050 URB1O60287 2271 aaKnown RBP0.52□□□□□ -2.33
SSR3-208ENST00000496050 FREM2Q5SZK8 3169 aa0.51□□□□□ -2.33
SSR3-208ENST00000496050 GOLGB1Q14789 3259 aaKnown RBP0.51□□□□□ -2.33
SSR3-208ENST00000496050 LCE6AA0A183 80 aa0.51□□□□□ -2.33
SSR3-208ENST00000496050 UMAD1C9J7I0 102 aa0.51□□□□□ -2.33
SSR3-208ENST00000496050 COX7BP24311 80 aa0.51□□□□□ -2.33
SSR3-208ENST00000496050 GAFA1Q96PS6 74 aa0.51□□□□□ -2.33
SSR3-208ENST00000496050 VPS13AQ96RL7 3174 aa0.51□□□□□ -2.33
SSR3-208ENST00000496050 CRIPTQ9P021 101 aa0.51□□□□□ -2.33
SSR3-208ENST00000496050 ANKRD36A6QL64 1941 aa0.5□□□□□ -2.33
SSR3-208ENST00000496050 SMG1Q96Q15 3661 aaKnown RBP0.5□□□□□ -2.33
SSR3-208ENST00000496050 DNAH14Q0VDD8 3507 aa0.5□□□□□ -2.33
SSR3-208ENST00000496050 USP32Q8NFA0 1604 aa0.5□□□□□ -2.33
SSR3-208ENST00000496050 BIVM-ERCC5R4GMW8 1640 aa0.5□□□□□ -2.33
SSR3-208ENST00000496050 CEP170BQ9Y4F5 1589 aaPredicted RBP0.5□□□□□ -2.33
SSR3-208ENST00000496050 CD163L1Q9NR16 1453 aa0.5□□□□□ -2.33
SSR3-208ENST00000496050 SYNE1Q8NF91 8797 aaKnown RBP0.5□□□□□ -2.33
SSR3-208ENST00000496050 IFI6P09912 130 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms