RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 GNRH2O43555 120 aa5.55□□□□□ -1.52
HDAC6-234ENST00000493923 FUSP35637 526 aaKnown RBP eCLIP5.55□□□□□ -1.52
HDAC6-234ENST00000493923 KRTAP10-2P60368 255 aa5.55□□□□□ -1.52
HDAC6-234ENST00000493923 CD164Q04900 197 aa5.55□□□□□ -1.52
HDAC6-234ENST00000493923 PMAIP1Q13794 54 aa5.55□□□□□ -1.52
HDAC6-234ENST00000493923 OPRPNQ99935 248 aaPredicted RBP5.55□□□□□ -1.52
HDAC6-234ENST00000493923 Q9H8V8 135 aa5.55□□□□□ -1.52
HDAC6-234ENST00000493923 TRAV23DV6A0A075B6W5 121 aa5.54□□□□□ -1.52
HDAC6-234ENST00000493923 A0A087WWL8 130 aa5.54□□□□□ -1.52
HDAC6-234ENST00000493923 A0A096LPF7 62 aa5.54□□□□□ -1.52
HDAC6-234ENST00000493923 IBA57-AS1B1ANH7 110 aa5.54□□□□□ -1.52
HDAC6-234ENST00000493923 IGHV3-53P01767 116 aa5.54□□□□□ -1.52
HDAC6-234ENST00000493923 CCL18P55774 89 aa5.54□□□□□ -1.52
HDAC6-234ENST00000493923 TRGV1A0A0A0MS02 117 aa5.53□□□□□ -1.52
HDAC6-234ENST00000493923 IGHV3-16A0A0C4DH30 117 aa5.53□□□□□ -1.52
HDAC6-234ENST00000493923 C16orf90A8MZG2 172 aa5.53□□□□□ -1.52
HDAC6-234ENST00000493923 PDE6GP18545 87 aa5.53□□□□□ -1.52
HDAC6-234ENST00000493923 FAM74A4Q5TZK3 123 aa5.53□□□□□ -1.52
HDAC6-234ENST00000493923 Q6ZRU5 148 aa5.53□□□□□ -1.52
HDAC6-234ENST00000493923 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
HDAC6-234ENST00000493923 FAM218AQ96MZ4 157 aa5.53□□□□□ -1.52
HDAC6-234ENST00000493923 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
HDAC6-234ENST00000493923 DNAH8Q96JB1 4490 aa5.52□□□□□ -1.53
HDAC6-234ENST00000493923 F8WEM9 126 aa5.52□□□□□ -1.53
HDAC6-234ENST00000493923 TMEM256-PLSCR3K7ERE1 68 aa5.52□□□□□ -1.53
HDAC6-234ENST00000493923 CXCL6P80162 114 aa5.52□□□□□ -1.53
HDAC6-234ENST00000493923 Q6ZRN7 208 aaPredicted RBP5.52□□□□□ -1.53
HDAC6-234ENST00000493923 LINC00467Q9BRT7 94 aa5.52□□□□□ -1.53
HDAC6-234ENST00000493923 Q9HAA7 133 aa5.52□□□□□ -1.53
HDAC6-234ENST00000493923 TRGV2A0A075B6R0 118 aa5.51□□□□□ -1.53
HDAC6-234ENST00000493923 IGHV1OR15-1A0A075B7D0 117 aa5.51□□□□□ -1.53
HDAC6-234ENST00000493923 DGAT2L7PQ6IED9 249 aa5.51□□□□□ -1.53
HDAC6-234ENST00000493923 ENHOQ6UWT2 76 aa5.51□□□□□ -1.53
HDAC6-234ENST00000493923 HERC1Q15751 4861 aa5.51□□□□□ -1.53
HDAC6-234ENST00000493923 A0A0U1RQV1 116 aa5.5□□□□□ -1.53
HDAC6-234ENST00000493923 H3BNG1 76 aa5.5□□□□□ -1.53
HDAC6-234ENST00000493923 FAM19A1Q7Z5A9 133 aa5.5□□□□□ -1.53
HDAC6-234ENST00000493923 ZNF625Q96I27 306 aaPredicted RBP5.5□□□□□ -1.53
HDAC6-234ENST00000493923 CDKN2A-AS1Q9UH64 79 aa5.5□□□□□ -1.53
HDAC6-234ENST00000493923 LECT2O14960 151 aa5.49□□□□□ -1.53
HDAC6-234ENST00000493923 CDK2AP2O75956 126 aa5.49□□□□□ -1.53
HDAC6-234ENST00000493923 SOSTDC1Q6X4U4 206 aa5.49□□□□□ -1.53
HDAC6-234ENST00000493923 SND1-IT1Q9HBX3 110 aa5.49□□□□□ -1.53
HDAC6-234ENST00000493923 FLG2Q5D862 2391 aaPredicted RBP5.49□□□□□ -1.53
HDAC6-234ENST00000493923 LOC110117498A0A087WWA1 95 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 A0A087WYN8 130 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 LOC100131303A0A0U1RQF7 123 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 DNAH10OSP0CZ25 163 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 SMIM11BQ8TCY0 68 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 CHCHD7Q9BUK0 85 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
HDAC6-234ENST00000493923 A0A0U1RRA0 63 aa5.47□□□□□ -1.53
HDAC6-234ENST00000493923 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
HDAC6-234ENST00000493923 NCR3O14931 201 aa5.47□□□□□ -1.53
HDAC6-234ENST00000493923 RPL36AP83881 106 aaKnown RBP5.47□□□□□ -1.53
HDAC6-234ENST00000493923 WFDC10BQ8IUB3 73 aa5.47□□□□□ -1.53
HDAC6-234ENST00000493923 RPL36ALQ969Q0 106 aaKnown RBP5.47□□□□□ -1.53
HDAC6-234ENST00000493923 MYCBP2O75592 4640 aa5.47□□□□□ -1.53
HDAC6-234ENST00000493923 IGKV2-29A2NJV5 120 aaPredicted RBP5.46□□□□□ -1.54
HDAC6-234ENST00000493923 K7EQD1 137 aa5.46□□□□□ -1.54
HDAC6-234ENST00000493923 MRPL55Q7Z7F7 128 aaKnown RBP5.46□□□□□ -1.54
HDAC6-234ENST00000493923 PRO0255Q9UI72 69 aa5.46□□□□□ -1.54
HDAC6-234ENST00000493923 SRRM2Q9UQ35 2752 aaKnown RBP5.45□□□□□ -1.54
HDAC6-234ENST00000493923 TRBV7-4A0A0J9YYF1 115 aa5.45□□□□□ -1.54
HDAC6-234ENST00000493923 GYPEP15421 78 aa5.45□□□□□ -1.54
HDAC6-234ENST00000493923 KRTAP10-1P60331 282 aa5.45□□□□□ -1.54
HDAC6-234ENST00000493923 LINC00242Q5T6M2 205 aa5.45□□□□□ -1.54
HDAC6-234ENST00000493923 Q8N1X5 172 aa5.45□□□□□ -1.54
HDAC6-234ENST00000493923 LINC00337Q8N6G1 96 aa5.45□□□□□ -1.54
HDAC6-234ENST00000493923 RMI2Q96E14 147 aa5.45□□□□□ -1.54
HDAC6-234ENST00000493923 DMBT1Q9UGM3 2413 aaPredicted RBP5.45□□□□□ -1.54
HDAC6-234ENST00000493923 TRGV4A0A0C4DH28 118 aa5.44□□□□□ -1.54
HDAC6-234ENST00000493923 ZNF561-AS1K7EIQ3 104 aa5.44□□□□□ -1.54
HDAC6-234ENST00000493923 Q1T7F1 81 aa5.44□□□□□ -1.54
HDAC6-234ENST00000493923 TMEM254Q8TBM7 123 aa5.44□□□□□ -1.54
HDAC6-234ENST00000493923 IGKV2-28A0A075B6P5 120 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 TRBV6-4A0A1B0GX49 114 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 PRYO14603 147 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 IGKV2D-28P01615 120 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 LINC01547P58512 204 aaPredicted RBP5.43□□□□□ -1.54
HDAC6-234ENST00000493923 HAMPP81172 84 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 NREPQ16612 68 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 Q6ZSN1 163 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 Q8N814 137 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 COX7B2Q8TF08 81 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 LINC00474Q9P2X8 69 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 Q9UF83 564 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 SNURFQ9Y675 71 aa5.43□□□□□ -1.54
HDAC6-234ENST00000493923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.42□□□□□ -1.54
HDAC6-234ENST00000493923 A0A087WTM6 91 aa5.42□□□□□ -1.54
HDAC6-234ENST00000493923 IGHV3-73A0A0B4J1V6 119 aa5.42□□□□□ -1.54
HDAC6-234ENST00000493923 SS18Q15532 418 aa5.42□□□□□ -1.54
HDAC6-234ENST00000493923 C9orf129Q5T035 196 aaKnown RBP5.42□□□□□ -1.54
HDAC6-234ENST00000493923 Q6ZQT0 140 aa5.42□□□□□ -1.54
HDAC6-234ENST00000493923 DEFB104AQ8WTQ1 72 aa5.42□□□□□ -1.54
HDAC6-234ENST00000493923 LINC00158P58513 81 aa5.41□□□□□ -1.54
HDAC6-234ENST00000493923 RNASE13Q5GAN3 156 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms