RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 C4BP0C0L5 1744 aa-0.2□□□□□ -2.44
GPCPD1-204ENST00000473797 ACANP16112 2415 aa-0.2□□□□□ -2.44
GPCPD1-204ENST00000473797 TRAV21A0A0B4J279 112 aa-0.2□□□□□ -2.44
GPCPD1-204ENST00000473797 CEBPZOSA8MTT3 80 aa-0.2□□□□□ -2.44
GPCPD1-204ENST00000473797 NDUFB1O75438 58 aa-0.2□□□□□ -2.44
GPCPD1-204ENST00000473797 COX6B2Q6YFQ2 88 aa-0.2□□□□□ -2.44
GPCPD1-204ENST00000473797 RABAC1Q9UI14 185 aa-0.2□□□□□ -2.44
GPCPD1-204ENST00000473797 STAB1Q9NY15 2570 aa-0.21□□□□□ -2.44
GPCPD1-204ENST00000473797 ACYP1P07311 99 aa-0.21□□□□□ -2.44
GPCPD1-204ENST00000473797 KIF14Q15058 1648 aa-0.21□□□□□ -2.44
GPCPD1-204ENST00000473797 MAP3K4Q9Y6R4 1608 aa-0.21□□□□□ -2.44
GPCPD1-204ENST00000473797 ALMS1Q8TCU4 4167 aa-0.21□□□□□ -2.44
GPCPD1-204ENST00000473797 LRP2P98164 4655 aa-0.22□□□□□ -2.44
GPCPD1-204ENST00000473797 FAT2Q9NYQ8 4349 aa-0.22□□□□□ -2.44
GPCPD1-204ENST00000473797 PCNX1Q96RV3 2341 aa-0.22□□□□□ -2.44
GPCPD1-204ENST00000473797 TMEM131LA2VDJ0 1609 aa-0.22□□□□□ -2.44
GPCPD1-204ENST00000473797 KANTRA0A1W2PQU2 76 aa-0.22□□□□□ -2.44
GPCPD1-204ENST00000473797 NDUFA3O95167 84 aa-0.22□□□□□ -2.44
GPCPD1-204ENST00000473797 KMT2AQ03164 3969 aa-0.22□□□□□ -2.44
GPCPD1-204ENST00000473797 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.23□□□□□ -2.451e-10■■■■■ 39.2
GPCPD1-204ENST00000473797 CICQ96RK0 1608 aaPredicted RBP-0.24□□□□□ -2.45
GPCPD1-204ENST00000473797 KNL1Q8NG31 2342 aa-0.24□□□□□ -2.45
GPCPD1-204ENST00000473797 BSNQ9UPA5 3926 aa-0.24□□□□□ -2.45
GPCPD1-204ENST00000473797 SETXQ7Z333 2677 aaKnown RBP-0.25□□□□□ -2.45
GPCPD1-204ENST00000473797 UACAQ9BZF9 1416 aa-0.25□□□□□ -2.45
GPCPD1-204ENST00000473797 URB2Q14146 1524 aaKnown RBP-0.25□□□□□ -2.45
GPCPD1-204ENST00000473797 NWD1Q149M9 1564 aa-0.25□□□□□ -2.45
GPCPD1-204ENST00000473797 NESP48681 1621 aa-0.25□□□□□ -2.45
GPCPD1-204ENST00000473797 PTPN23Q9H3S7 1636 aa-0.25□□□□□ -2.45
GPCPD1-204ENST00000473797 DOT1LQ8TEK3 1739 aa-0.25□□□□□ -2.45
GPCPD1-204ENST00000473797 ADAMTS12P58397 1594 aa-0.26□□□□□ -2.45
GPCPD1-204ENST00000473797 C3orf79P0CE67 100 aa-0.26□□□□□ -2.45
GPCPD1-204ENST00000473797 GNG2P59768 71 aa-0.26□□□□□ -2.45
GPCPD1-204ENST00000473797 KRTAP19-7Q3SYF9 63 aa-0.26□□□□□ -2.45
GPCPD1-204ENST00000473797 COL6A3P12111 3177 aa-0.26□□□□□ -2.45
GPCPD1-204ENST00000473797 ARFGEF2Q9Y6D5 1785 aa-0.27□□□□□ -2.45
GPCPD1-204ENST00000473797 NCOA2Q15596 1464 aa-0.27□□□□□ -2.45
GPCPD1-204ENST00000473797 HECTD4Q9Y4D8 3996 aa-0.27□□□□□ -2.45
GPCPD1-204ENST00000473797 SPRR2AP35326 72 aa-0.27□□□□□ -2.45
GPCPD1-204ENST00000473797 IFI27P40305 119 aaPredicted RBP-0.27□□□□□ -2.45
GPCPD1-204ENST00000473797 PRO3102Q9H379 93 aa-0.27□□□□□ -2.45
GPCPD1-204ENST00000473797 LRP1BQ9NZR2 4599 aa-0.27□□□□□ -2.45
GPCPD1-204ENST00000473797 PIK3C2BO00750 1634 aa-0.27□□□□□ -2.45
GPCPD1-204ENST00000473797 PDE4DIPQ5VU43 2346 aa-0.28□□□□□ -2.45
GPCPD1-204ENST00000473797 UMAD1C9J7I0 102 aa-0.28□□□□□ -2.45
GPCPD1-204ENST00000473797 SRRM2Q9UQ35 2752 aaKnown RBP-0.28□□□□□ -2.45
GPCPD1-204ENST00000473797 DDX60LQ5H9U9 1706 aaKnown RBP-0.29□□□□□ -2.46
GPCPD1-204ENST00000473797 LINC00158P58513 81 aa-0.29□□□□□ -2.46
GPCPD1-204ENST00000473797 ADIRFQ15847 76 aa-0.29□□□□□ -2.46
GPCPD1-204ENST00000473797 USP32Q8NFA0 1604 aa-0.29□□□□□ -2.46
GPCPD1-204ENST00000473797 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.29□□□□□ -2.46
GPCPD1-204ENST00000473797 TENM2Q9NT68 2774 aa-0.29□□□□□ -2.46
GPCPD1-204ENST00000473797 ZNF831Q5JPB2 1677 aa-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 MUC2Q02817 5179 aa-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 SMARCA2P51531 1590 aa-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 A0A087WXM4 84 aa-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 KRTAP6-2Q3LI66 62 aa-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 TDRG1Q3Y452 100 aa-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 S100A13Q99584 98 aa-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 ST20Q9HBF5 79 aa-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 KMT2CQ8NEZ4 4911 aaKnown RBP-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 MAGI3Q5TCQ9 1506 aa-0.3□□□□□ -2.46
GPCPD1-204ENST00000473797 NBASA2RRP1 2371 aa-0.31□□□□□ -2.46
GPCPD1-204ENST00000473797 RB1CC1Q8TDY2 1594 aa-0.31□□□□□ -2.46
GPCPD1-204ENST00000473797 SCN11AQ9UI33 1791 aa-0.31□□□□□ -2.46
GPCPD1-204ENST00000473797 ATP5EP2Q5VTU8 51 aa-0.31□□□□□ -2.46
GPCPD1-204ENST00000473797 PLCH1Q4KWH8 1693 aa-0.32□□□□□ -2.46
GPCPD1-204ENST00000473797 NEBP20929 6669 aa-0.33□□□□□ -2.46
GPCPD1-204ENST00000473797 CFAP43Q8NDM7 1665 aa-0.33□□□□□ -2.46
GPCPD1-204ENST00000473797 PCLOQ9Y6V0 5065 aa-0.33□□□□□ -2.46
GPCPD1-204ENST00000473797 IFI6P09912 130 aa-0.33□□□□□ -2.46
GPCPD1-204ENST00000473797 DEFA5Q01523 94 aa-0.33□□□□□ -2.46
GPCPD1-204ENST00000473797 NREPQ16612 68 aa-0.33□□□□□ -2.46
GPCPD1-204ENST00000473797 SETD2Q9BYW2 2564 aaPredicted RBP-0.33□□□□□ -2.46
GPCPD1-204ENST00000473797 PLXNC1O60486 1568 aa-0.33□□□□□ -2.46
GPCPD1-204ENST00000473797 SPTBN4Q9H254 2564 aa-0.34□□□□□ -2.46
GPCPD1-204ENST00000473797 CCDC88BA6NC98 1476 aa-0.34□□□□□ -2.46
GPCPD1-204ENST00000473797 H3BNG1 76 aa-0.34□□□□□ -2.46
GPCPD1-204ENST00000473797 NDUFA4O00483 81 aa-0.34□□□□□ -2.46
GPCPD1-204ENST00000473797 SPRR2EP22531 72 aa-0.34□□□□□ -2.46
GPCPD1-204ENST00000473797 KRTAP20-2Q3LI61 65 aa-0.34□□□□□ -2.46
GPCPD1-204ENST00000473797 DIP2BQ9P265 1576 aa-0.34□□□□□ -2.46
GPCPD1-204ENST00000473797 DEPDC5O75140 1603 aa-0.35□□□□□ -2.46
GPCPD1-204ENST00000473797 HERC1Q15751 4861 aa-0.35□□□□□ -2.46
GPCPD1-204ENST00000473797 CCDC18Q5T9S5 1454 aa-0.35□□□□□ -2.46
GPCPD1-204ENST00000473797 H3BUT2 72 aa-0.35□□□□□ -2.47
GPCPD1-204ENST00000473797 MT4P47944 62 aa-0.35□□□□□ -2.47
GPCPD1-204ENST00000473797 KRTAP19-8Q3LI54 63 aa-0.35□□□□□ -2.47
GPCPD1-204ENST00000473797 PRKDCP78527 4128 aaKnown RBP-0.35□□□□□ -2.47
GPCPD1-204ENST00000473797 NBEAL1Q6ZS30 2694 aa-0.35□□□□□ -2.47
GPCPD1-204ENST00000473797 STAB2Q8WWQ8 2551 aa-0.36□□□□□ -2.47
GPCPD1-204ENST00000473797 SMIM13P0DJ93 91 aa-0.36□□□□□ -2.47
GPCPD1-204ENST00000473797 HMGA1P17096 107 aaKnown RBP-0.36□□□□□ -2.47
GPCPD1-204ENST00000473797 SVEP1Q4LDE5 3571 aa-0.36□□□□□ -2.47
GPCPD1-204ENST00000473797 RICTORQ6R327 1708 aa-0.36□□□□□ -2.47
GPCPD1-204ENST00000473797 CREBBPQ92793 2442 aa-0.36□□□□□ -2.47
GPCPD1-204ENST00000473797 WIZO95785 1651 aa-0.37□□□□□ -2.47
GPCPD1-204ENST00000473797 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.37□□□□□ -2.47
GPCPD1-204ENST00000473797 DCAF1Q9Y4B6 1507 aa-0.37□□□□□ -2.47
GPCPD1-204ENST00000473797 ITSN1Q15811 1721 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms