RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
GPCPD1-204ENST00000473797 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
GPCPD1-204ENST00000473797 SENP3Q9H4L4 574 aaPredicted RBP22.91■■□□□ 1.26
GPCPD1-204ENST00000473797 PHF23Q9BUL5 403 aaPredicted RBP22.64■■□□□ 1.21
GPCPD1-204ENST00000473797 FOXD1Q16676 465 aa21.32■■□□□ 1
GPCPD1-204ENST00000473797 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
GPCPD1-204ENST00000473797 PPP6R1Q9UPN7 881 aa20.09■□□□□ 0.81
GPCPD1-204ENST00000473797 ADRA2BP18089 450 aa19.99■□□□□ 0.79
GPCPD1-204ENST00000473797 PIAS4Q8N2W9 510 aaPredicted RBP19.92■□□□□ 0.78
GPCPD1-204ENST00000473797 MSH5O43196 834 aa19.89■□□□□ 0.77
GPCPD1-204ENST00000473797 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
GPCPD1-204ENST00000473797 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
GPCPD1-204ENST00000473797 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
GPCPD1-204ENST00000473797 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
GPCPD1-204ENST00000473797 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
GPCPD1-204ENST00000473797 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
GPCPD1-204ENST00000473797 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
GPCPD1-204ENST00000473797 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
GPCPD1-204ENST00000473797 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
GPCPD1-204ENST00000473797 DCAF8L1A6NGE4 600 aa17.29■□□□□ 0.36
GPCPD1-204ENST00000473797 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
GPCPD1-204ENST00000473797 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
GPCPD1-204ENST00000473797 KCNA4P22459 653 aa17.04■□□□□ 0.32
GPCPD1-204ENST00000473797 RNF39Q9H2S5 420 aa17■□□□□ 0.31
GPCPD1-204ENST00000473797 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
GPCPD1-204ENST00000473797 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
GPCPD1-204ENST00000473797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
GPCPD1-204ENST00000473797 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
GPCPD1-204ENST00000473797 SLC4A2P04920 1241 aa16.42■□□□□ 0.22
GPCPD1-204ENST00000473797 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
GPCPD1-204ENST00000473797 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
GPCPD1-204ENST00000473797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
GPCPD1-204ENST00000473797 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
GPCPD1-204ENST00000473797 CAPN15O75808 1086 aa16.02■□□□□ 0.16
GPCPD1-204ENST00000473797 APLP2Q06481 763 aa16.01■□□□□ 0.15
GPCPD1-204ENST00000473797 DSG3P32926 999 aa15.97■□□□□ 0.15
GPCPD1-204ENST00000473797 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
GPCPD1-204ENST00000473797 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
GPCPD1-204ENST00000473797 FOXD4L1Q9NU39 408 aa15.86■□□□□ 0.13
GPCPD1-204ENST00000473797 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
GPCPD1-204ENST00000473797 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
GPCPD1-204ENST00000473797 ZBTB22O15209 634 aa15.68■□□□□ 0.1
GPCPD1-204ENST00000473797 ABCB7O75027 752 aa15.64■□□□□ 0.09
GPCPD1-204ENST00000473797 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
GPCPD1-204ENST00000473797 POLA2Q14181 598 aa15.49■□□□□ 0.07
GPCPD1-204ENST00000473797 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
GPCPD1-204ENST00000473797 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
GPCPD1-204ENST00000473797 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
GPCPD1-204ENST00000473797 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
GPCPD1-204ENST00000473797 POTEHQ6S545 545 aa14.96□□□□□ -0.01
GPCPD1-204ENST00000473797 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
GPCPD1-204ENST00000473797 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
GPCPD1-204ENST00000473797 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
GPCPD1-204ENST00000473797 FBLN2P98095 1184 aa14.9□□□□□ -0.02
GPCPD1-204ENST00000473797 MKRN4PQ13434 485 aaPredicted RBP14.84□□□□□ -0.03
GPCPD1-204ENST00000473797 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
GPCPD1-204ENST00000473797 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
GPCPD1-204ENST00000473797 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
GPCPD1-204ENST00000473797 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
GPCPD1-204ENST00000473797 REM2Q8IYK8 340 aaPredicted RBP14.78□□□□□ -0.04
GPCPD1-204ENST00000473797 SSUH2Q9Y2M2 353 aa14.62□□□□□ -0.07
GPCPD1-204ENST00000473797 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
GPCPD1-204ENST00000473797 ZNF692Q9BU19 519 aaPredicted RBP14.59□□□□□ -0.07
GPCPD1-204ENST00000473797 FXR2P51116 673 aaKnown RBP eCLIP14.49□□□□□ -0.09
GPCPD1-204ENST00000473797 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
GPCPD1-204ENST00000473797 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
GPCPD1-204ENST00000473797 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
GPCPD1-204ENST00000473797 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
GPCPD1-204ENST00000473797 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
GPCPD1-204ENST00000473797 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
GPCPD1-204ENST00000473797 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
GPCPD1-204ENST00000473797 HAX1O00165 279 aa14.13□□□□□ -0.15
GPCPD1-204ENST00000473797 SP7Q8TDD2 431 aaPredicted RBP14.12□□□□□ -0.15
GPCPD1-204ENST00000473797 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.16
GPCPD1-204ENST00000473797 CHADLQ6NUI6 762 aa14.05□□□□□ -0.16
GPCPD1-204ENST00000473797 EVX2Q03828 476 aa14.01□□□□□ -0.17
GPCPD1-204ENST00000473797 PROM2Q8N271 834 aa14.01□□□□□ -0.17
GPCPD1-204ENST00000473797 C19orf67A6NJJ6 358 aa14□□□□□ -0.17
GPCPD1-204ENST00000473797 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
GPCPD1-204ENST00000473797 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
GPCPD1-204ENST00000473797 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
GPCPD1-204ENST00000473797 MNX1P50219 401 aaPredicted RBP13.73□□□□□ -0.21
GPCPD1-204ENST00000473797 GABBR2O75899 941 aa13.71□□□□□ -0.21
GPCPD1-204ENST00000473797 CLCN6P51797 869 aa13.67□□□□□ -0.22
GPCPD1-204ENST00000473797 FKBP8Q14318 412 aa13.67□□□□□ -0.22
GPCPD1-204ENST00000473797 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
GPCPD1-204ENST00000473797 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
GPCPD1-204ENST00000473797 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
GPCPD1-204ENST00000473797 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
GPCPD1-204ENST00000473797 MIER1Q8N108 512 aa13.52□□□□□ -0.25
GPCPD1-204ENST00000473797 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
GPCPD1-204ENST00000473797 POTEIP0CG38 1075 aa13.44□□□□□ -0.26
GPCPD1-204ENST00000473797 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
GPCPD1-204ENST00000473797 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
GPCPD1-204ENST00000473797 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
GPCPD1-204ENST00000473797 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
GPCPD1-204ENST00000473797 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
GPCPD1-204ENST00000473797 CCDC61Q9Y6R9 512 aa13.36□□□□□ -0.27
GPCPD1-204ENST00000473797 DCBLD2Q96PD2 775 aa13.35□□□□□ -0.27
GPCPD1-204ENST00000473797 TSPYL2Q9H2G4 693 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms