RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 CFAP43Q8NDM7 1665 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 REV3LO60673 3130 aa0.17□□□□□ -2.38
SSB-209ENST00000470621 I3L3M4 83 aa0.17□□□□□ -2.38
SSB-209ENST00000470621 PRM1P04553 51 aa0.17□□□□□ -2.38
SSB-209ENST00000470621 NWD1Q149M9 1564 aa0.17□□□□□ -2.38
SSB-209ENST00000470621 PLCH1Q4KWH8 1693 aa0.17□□□□□ -2.38
SSB-209ENST00000470621 EIF2AK4Q9P2K8 1649 aaKnown RBP0.16□□□□□ -2.38
SSB-209ENST00000470621 CCDC141Q6ZP82 1450 aa0.16□□□□□ -2.38
SSB-209ENST00000470621 ADAMTS12P58397 1594 aa0.16□□□□□ -2.38
SSB-209ENST00000470621 TENM4Q6N022 2769 aa0.16□□□□□ -2.38
SSB-209ENST00000470621 COX8AP10176 69 aa0.16□□□□□ -2.38
SSB-209ENST00000470621 NREPQ16612 68 aa0.16□□□□□ -2.38
SSB-209ENST00000470621 ATP5EP2Q5VTU8 51 aa0.16□□□□□ -2.38
SSB-209ENST00000470621 TNRC6CQ9HCJ0 1690 aaKnown RBP0.16□□□□□ -2.38
SSB-209ENST00000470621 NESP48681 1621 aa0.16□□□□□ -2.38
SSB-209ENST00000470621 MADDQ8WXG6 1647 aa0.16□□□□□ -2.38
SSB-209ENST00000470621 DIP2AQ14689 1571 aa0.15□□□□□ -2.38
SSB-209ENST00000470621 CDC42BPGQ6DT37 1551 aa0.15□□□□□ -2.38
SSB-209ENST00000470621 WIZO95785 1651 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 MYCBP2O75592 4640 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 WNK2Q9Y3S1 2297 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 KMT2AQ03164 3969 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 CNOT1A5YKK6 2376 aaKnown RBP0.15□□□□□ -2.39
SSB-209ENST00000470621 UMAD1C9J7I0 102 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 SPINK1P00995 79 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 IFI27P40305 119 aaPredicted RBP0.15□□□□□ -2.39
SSB-209ENST00000470621 FXYD6Q9H0Q3 95 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 U3KQA8 63 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 CSPG4Q6UVK1 2322 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 C4AP0C0L4 1744 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 C4BP0C0L5 1744 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 LPAP08519 4548 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 MAST4O15021 2626 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 UNC79Q9P2D8 2635 aa0.15□□□□□ -2.39
SSB-209ENST00000470621 ABCA9Q8IUA7 1624 aa0.14□□□□□ -2.39
SSB-209ENST00000470621 A0A087WXM4 84 aa0.14□□□□□ -2.39
SSB-209ENST00000470621 NDUFB1O75438 58 aa0.14□□□□□ -2.39
SSB-209ENST00000470621 NDUFA3O95167 84 aa0.14□□□□□ -2.39
SSB-209ENST00000470621 SMCO4Q9NRQ5 59 aa0.14□□□□□ -2.39
SSB-209ENST00000470621 ZC3H13Q5T200 1668 aaKnown RBP0.14□□□□□ -2.39
SSB-209ENST00000470621 CLIP1P30622 1438 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 ASXL1Q8IXJ9 1541 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 CICQ96RK0 1608 aaPredicted RBP0.13□□□□□ -2.39
SSB-209ENST00000470621 NRAPQ86VF7 1730 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 HRNRQ86YZ3 2850 aaPredicted RBP0.13□□□□□ -2.39
SSB-209ENST00000470621 ATRQ13535 2644 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 DEFA5Q01523 94 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 HILPDAQ9Y5L2 63 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 ALMS1Q8TCU4 4167 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 KNL1Q8NG31 2342 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 TJP1Q07157 1748 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 LMTK2Q8IWU2 1503 aa0.13□□□□□ -2.39
SSB-209ENST00000470621 NCOR2Q9Y618 2525 aa0.12□□□□□ -2.39
SSB-209ENST00000470621 HIVEP3Q5T1R4 2406 aa0.12□□□□□ -2.39
SSB-209ENST00000470621 NDUFA4O00483 81 aa0.12□□□□□ -2.39
SSB-209ENST00000470621 PDCD5O14737 125 aa0.12□□□□□ -2.39
SSB-209ENST00000470621 HEPN1Q6WQI6 88 aa0.12□□□□□ -2.39
SSB-209ENST00000470621 WFDC13Q8IUB5 93 aa0.12□□□□□ -2.39
SSB-209ENST00000470621 RNF17Q9BXT8 1623 aaKnown RBP0.12□□□□□ -2.39
SSB-209ENST00000470621 DUOX2Q9NRD8 1548 aa0.12□□□□□ -2.39
SSB-209ENST00000470621 UBR5O95071 2799 aaPredicted RBP0.11□□□□□ -2.39
SSB-209ENST00000470621 GPR98Q8WXG9 6306 aa0.11□□□□□ -2.39
SSB-209ENST00000470621 CACNA1AO00555 2505 aa0.11□□□□□ -2.39
SSB-209ENST00000470621 H0YAA0 97 aa0.11□□□□□ -2.39
SSB-209ENST00000470621 CCL22O00626 93 aa0.11□□□□□ -2.39
SSB-209ENST00000470621 SPTA1P02549 2419 aa0.11□□□□□ -2.39
SSB-209ENST00000470621 DDX60LQ5H9U9 1706 aaKnown RBP0.1□□□□□ -2.39
SSB-209ENST00000470621 H3BVH4 76 aa0.1□□□□□ -2.39
SSB-209ENST00000470621 CDKN2A-AS1Q9UH64 79 aa0.1□□□□□ -2.39
SSB-209ENST00000470621 ABCA2Q9BZC7 2435 aa0.1□□□□□ -2.39
SSB-209ENST00000470621 ANKRD50Q9ULJ7 1429 aa0.1□□□□□ -2.39
SSB-209ENST00000470621 MROH1Q8NDA8 1641 aa0.09□□□□□ -2.39
SSB-209ENST00000470621 HSPG2P98160 4391 aa0.09□□□□□ -2.39
SSB-209ENST00000470621 PKD1L1Q8TDX9 2849 aa0.09□□□□□ -2.39
SSB-209ENST00000470621 SPINK4O60575 86 aa0.09□□□□□ -2.4
SSB-209ENST00000470621 SPRR2DP22532 72 aa0.09□□□□□ -2.4
SSB-209ENST00000470621 RPL38P63173 70 aaKnown RBP0.09□□□□□ -2.4
SSB-209ENST00000470621 EP300Q09472 2414 aaPredicted RBP0.09□□□□□ -2.4
SSB-209ENST00000470621 LRP1BQ9NZR2 4599 aa0.09□□□□□ -2.4
SSB-209ENST00000470621 PLXNC1O60486 1568 aa0.09□□□□□ -2.4
SSB-209ENST00000470621 ENHOQ6UWT2 76 aa0.08□□□□□ -2.4
SSB-209ENST00000470621 COX6B2Q6YFQ2 88 aa0.08□□□□□ -2.4
SSB-209ENST00000470621 CHD8Q9HCK8 2581 aa0.08□□□□□ -2.4
SSB-209ENST00000470621 HECTD4Q9Y4D8 3996 aa0.08□□□□□ -2.4
SSB-209ENST00000470621 NHSQ6T4R5 1651 aa0.08□□□□□ -2.4
SSB-209ENST00000470621 GLI2P10070 1586 aa0.07□□□□□ -2.4
SSB-209ENST00000470621 PRO3102Q9H379 93 aa0.07□□□□□ -2.4
SSB-209ENST00000470621 KCNQ1DNQ9H478 68 aa0.07□□□□□ -2.4
SSB-209ENST00000470621 IGSF10Q6WRI0 2623 aa0.07□□□□□ -2.4
SSB-209ENST00000470621 PTPN13Q12923 2485 aa0.07□□□□□ -2.4
SSB-209ENST00000470621 CRIP1P50238 77 aa0.06□□□□□ -2.4
SSB-209ENST00000470621 LINC00158P58513 81 aa0.06□□□□□ -2.4
SSB-209ENST00000470621 LRP2P98164 4655 aa0.06□□□□□ -2.4
SSB-209ENST00000470621 EFCAB5A4FU69 1503 aa0.06□□□□□ -2.4
SSB-209ENST00000470621 INO80Q9ULG1 1556 aaPredicted RBP0.06□□□□□ -2.4
SSB-209ENST00000470621 MAP1BP46821 2468 aaKnown RBP0.05□□□□□ -2.4
SSB-209ENST00000470621 LOC730098B7Z3J9 87 aa0.05□□□□□ -2.4
SSB-209ENST00000470621 M0R2T5 61 aa0.05□□□□□ -2.4
SSB-209ENST00000470621 WNK1Q9H4A3 2382 aa0.05□□□□□ -2.4
SSB-209ENST00000470621 ABCA6Q8N139 1617 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms