RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 PDE4DIPQ5VU43 2346 aa-0.19□□□□□ -2.44
TM9SF3-203ENST00000464654 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
TM9SF3-203ENST00000464654 SPG11Q96JI7 2443 aa-0.19□□□□□ -2.44
TM9SF3-203ENST00000464654 LYSTQ99698 3801 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 CUBNO60494 3623 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 CNOT1A5YKK6 2376 aaKnown RBP-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 TEX14Q8IWB6 1497 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 LEPROTL1O95214 131 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 MT1MQ8N339 61 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 PSENENQ9NZ42 101 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 ABCC2Q92887 1545 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 EYSQ5T1H1 3165 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 CEP290O15078 2479 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 CSMD2Q7Z408 3487 aa-0.2□□□□□ -2.44
TM9SF3-203ENST00000464654 SHPRHQ149N8 1683 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 CNTLNQ9NXG0 1405 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 FYCO1Q9BQS8 1478 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 NBEAQ8NFP9 2946 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 NBASA2RRP1 2371 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 F8WEM9 126 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 M0R143 59 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 MT2AP02795 61 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 IGLC2P0DOY2 106 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 IGLC3P0DOY3 106 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 MT1GP13640 62 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 MT1XP80297 61 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 DEFB112Q30KQ8 113 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 KRTAP6-2Q3LI66 62 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 C9orf62Q8N4C0 152 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 CDKN2A-AS1Q9UH64 79 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 DMXL2Q8TDJ6 3036 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 DNAH9Q9NYC9 4486 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 DNHD1Q96M86 4753 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 TARBP1Q13395 1621 aaKnown RBP-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 MUC17Q685J3 4493 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 CHD7Q9P2D1 2997 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 MARF1Q9Y4F3 1742 aaKnown RBP-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 CLIP1P30622 1438 aa-0.21□□□□□ -2.44
TM9SF3-203ENST00000464654 CENPEQ02224 2701 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 SLIT1O75093 1534 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 DNAH3Q8TD57 4116 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 BIRC6Q9NR09 4857 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 MT1AP04731 61 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 MT1FP04733 61 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 DEFA5Q01523 94 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 NCMAPQ5T1S8 102 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 SPRR2FQ96RM1 72 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 HIGD1BQ9P298 99 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 AKAP9Q99996 3911 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 KIAA1551Q9HCM1 1747 aa-0.22□□□□□ -2.44
TM9SF3-203ENST00000464654 DNAH6Q9C0G6 4158 aa-0.22□□□□□ -2.45
TM9SF3-203ENST00000464654 NRXN1Q9ULB1 1477 aa-0.22□□□□□ -2.45
TM9SF3-203ENST00000464654 SPEGQ15772 3267 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 SPTAN1Q13813 2472 aaKnown RBP-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 KALRNO60229 2985 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 A0A0C4DFX4 3053 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 SRCAPQ6ZRS2 3230 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 UTP20O75691 2785 aaKnown RBP-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 MT1EP04732 61 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 SMIM11AP58511 58 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 MT1LQ93083 61 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 CEP250Q9BV73 2442 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 ANKRD36A6QL64 1941 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 BPTFQ12830 3046 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 BOD1L1Q8NFC6 3051 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 VPS8Q8N3P4 1428 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 LOC400499M0QZD8 3231 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 SAMD9Q5K651 1589 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 RELNP78509 3460 aa-0.23□□□□□ -2.45
TM9SF3-203ENST00000464654 TRANK1O15050 2925 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 ACACAQ13085 2346 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.24□□□□□ -2.451e-7■□□□□ 10.8
TM9SF3-203ENST00000464654 FMN2Q9NZ56 1722 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 WDFY4Q6ZS81 3184 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 DNAH2Q9P225 4427 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 H0YGG7 62 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 K7EP34 96 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 RPL38P63173 70 aaKnown RBP-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 NMSQ5H8A3 153 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 WFDC13Q8IUB5 93 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 KRTAP8-1Q8IUC2 63 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 UBE2D4Q9Y2X8 147 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 FREM2Q5SZK8 3169 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 ANK3Q12955 4377 aaKnown RBP-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 CUX1P39880 1505 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 SACSQ9NZJ4 4579 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 SVEP1Q4LDE5 3571 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 ZFHX4Q86UP3 3567 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 KNDC1Q76NI1 1749 aa-0.24□□□□□ -2.45
TM9SF3-203ENST00000464654 DCHS1Q96JQ0 3298 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 CSMD1Q96PZ7 3565 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 VPS13DQ5THJ4 4388 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 DMXL1Q9Y485 3027 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 A0A1B0GUT8 65 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 CYB5AP00167 134 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 GYPAP02724 150 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 S100A8P05109 93 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 PEA15Q15121 130 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 LELP1Q5T871 98 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 DNAH7Q8WXX0 4024 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms