RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 UQCRHP07919 91 aa-0.59□□□□□ -2.5
LINC00397-201ENST00000422074 ASIPP42127 132 aa-0.59□□□□□ -2.5
LINC00397-201ENST00000422074 ANKRD50Q9ULJ7 1429 aa-0.59□□□□□ -2.5
LINC00397-201ENST00000422074 CUX1P39880 1505 aa-0.59□□□□□ -2.5
LINC00397-201ENST00000422074 ABCC2Q92887 1545 aa-0.59□□□□□ -2.5
LINC00397-201ENST00000422074 DNAH2Q9P225 4427 aa-0.6□□□□□ -2.5
LINC00397-201ENST00000422074 NBEAL2Q6ZNJ1 2754 aa-0.6□□□□□ -2.51
LINC00397-201ENST00000422074 TMEM218A2RU14 115 aa-0.6□□□□□ -2.51
LINC00397-201ENST00000422074 C9orf92A6NGG3 77 aa-0.6□□□□□ -2.51
LINC00397-201ENST00000422074 MPC2O95563 127 aa-0.6□□□□□ -2.51
LINC00397-201ENST00000422074 DEFA5Q01523 94 aa-0.6□□□□□ -2.51
LINC00397-201ENST00000422074 MYH4Q9Y623 1939 aa-0.6□□□□□ -2.51
LINC00397-201ENST00000422074 WDR87Q6ZQQ6 2873 aa-0.6□□□□□ -2.51
LINC00397-201ENST00000422074 RYR3Q15413 4870 aa-0.6□□□□□ -2.51
LINC00397-201ENST00000422074 BIRC6Q9NR09 4857 aa-0.6□□□□□ -2.51
LINC00397-201ENST00000422074 MLH3Q9UHC1 1453 aa-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 SAMD9Q5K651 1589 aa-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 DSPP15924 2871 aaKnown RBP-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 RPL38P63173 70 aaKnown RBP-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 HMGN3Q15651 99 aa-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 ALKAL2Q6UX46 152 aa-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 TRGV9Q99603 122 aa-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 ANK3Q12955 4377 aaKnown RBP-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 PKD1L3Q7Z443 1732 aa-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 RAPGEF2Q9Y4G8 1499 aa-0.61□□□□□ -2.51
LINC00397-201ENST00000422074 RGPD3A6NKT7 1758 aaPredicted RBP-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 RGPD8O14715 1765 aaPredicted RBP-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 RGPD4Q7Z3J3 1758 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 RGPD5Q99666 1765 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 DNAH1Q9P2D7 4330 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 ALKQ9UM73 1620 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 C20orf202A1L168 122 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 LINC00587B1AMM8 73 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 D6R8Y8 96 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 GNGT2O14610 69 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 COX6B2Q6YFQ2 88 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 ZNF720Q7Z2F6 126 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 MUSTN1Q8IVN3 82 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 QSER1Q2KHR3 1735 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 CRYBG1Q9Y4K1 1723 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 KIAA1109Q2LD37 5005 aa-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 APOBP04114 4563 aaKnown RBP-0.62□□□□□ -2.51
LINC00397-201ENST00000422074 RNF213Q63HN8 5207 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 LAMA3Q16787 3333 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 H7BZZ5 65 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 LEPROTL1O95214 131 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 IGLC2P0DOY2 106 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 IGLC3P0DOY3 106 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 PMCHL2Q9BQD1 86 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 PREX1Q8TCU6 1659 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 ACACBO00763 2458 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 USP9XQ93008 2570 aaPredicted RBP-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 TRIOO75962 3097 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 RELNP78509 3460 aa-0.63□□□□□ -2.51
LINC00397-201ENST00000422074 PLECQ15149 4684 aaKnown RBP-0.64□□□□□ -2.51
LINC00397-201ENST00000422074 ATOX1O00244 68 aa-0.64□□□□□ -2.51
LINC00397-201ENST00000422074 COX7BP24311 80 aa-0.64□□□□□ -2.51
LINC00397-201ENST00000422074 DEFB110Q30KQ9 67 aa-0.64□□□□□ -2.51
LINC00397-201ENST00000422074 ETDBQ3ZM63 59 aa-0.64□□□□□ -2.51
LINC00397-201ENST00000422074 S4R3F8 94 aa-0.64□□□□□ -2.51
LINC00397-201ENST00000422074 RYR2Q92736 4967 aa-0.65□□□□□ -2.51
LINC00397-201ENST00000422074 UQCRHLA0A096LP55 91 aa-0.65□□□□□ -2.51
LINC00397-201ENST00000422074 NDUFA3O95167 84 aa-0.65□□□□□ -2.51
LINC00397-201ENST00000422074 SERP2Q8N6R1 65 aa-0.65□□□□□ -2.51
LINC00397-201ENST00000422074 PRDM15P57071 1507 aaPredicted RBP-0.65□□□□□ -2.51
LINC00397-201ENST00000422074 LRRC9Q6ZRR7 1453 aa-0.66□□□□□ -2.51
LINC00397-201ENST00000422074 MAGI2Q86UL8 1455 aa-0.66□□□□□ -2.51
LINC00397-201ENST00000422074 F8WEM9 126 aa-0.66□□□□□ -2.52
LINC00397-201ENST00000422074 COL5A1-AS1Q5SY13 56 aa-0.66□□□□□ -2.52
LINC00397-201ENST00000422074 FRYQ5TBA9 3013 aa-0.66□□□□□ -2.52
LINC00397-201ENST00000422074 CLTCQ00610 1675 aaKnown RBP-0.66□□□□□ -2.52
LINC00397-201ENST00000422074 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.66□□□□□ -2.52
LINC00397-201ENST00000422074 TIAM2Q8IVF5 1701 aa-0.67□□□□□ -2.52
LINC00397-201ENST00000422074 ANKRD36CQ5JPF3 1778 aa-0.67□□□□□ -2.52
LINC00397-201ENST00000422074 SRCAPQ6ZRS2 3230 aa-0.67□□□□□ -2.52
LINC00397-201ENST00000422074 LINC00032P0C843 101 aa-0.67□□□□□ -2.52
LINC00397-201ENST00000422074 C3orf79P0CE67 100 aa-0.67□□□□□ -2.52
LINC00397-201ENST00000422074 UBE2D4Q9Y2X8 147 aa-0.67□□□□□ -2.52
LINC00397-201ENST00000422074 TLN2Q9Y4G6 2542 aa-0.67□□□□□ -2.52
LINC00397-201ENST00000422074 NRXN1Q9ULB1 1477 aa-0.67□□□□□ -2.52
LINC00397-201ENST00000422074 ANKRD36BQ8N2N9 1353 aa-0.68□□□□□ -2.52
LINC00397-201ENST00000422074 ZFYVE16Q7Z3T8 1539 aa-0.68□□□□□ -2.52
LINC00397-201ENST00000422074 H0YAA0 97 aa-0.68□□□□□ -2.52
LINC00397-201ENST00000422074 FAUP35544 74 aaKnown RBP-0.68□□□□□ -2.52
LINC00397-201ENST00000422074 DEFB1P60022 68 aa-0.68□□□□□ -2.52
LINC00397-201ENST00000422074 GAFA1Q96PS6 74 aa-0.68□□□□□ -2.52
LINC00397-201ENST00000422074 SACSQ9NZJ4 4579 aa-0.68□□□□□ -2.52
LINC00397-201ENST00000422074 FYCO1Q9BQS8 1478 aa-0.68□□□□□ -2.52
LINC00397-201ENST00000422074 LRRC7Q96NW7 1537 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 SUPT6HQ7KZ85 1726 aaKnown RBP-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 A0A1B0GUT8 65 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 IQCF6A8MYZ5 107 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 K7EP34 96 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 CYB5AP00167 134 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 MT-ATP8P03928 68 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 SMIM11AP58511 58 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 S100A10P60903 97 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 PRO3102Q9H379 93 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 DNHD1Q96M86 4753 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 MAP3K1Q13233 1512 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms