RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 STAB1Q9NY15 2570 aa6.46□□□□□ -1.38
MSH2-202ENST00000406134 COL6A5A8TX70 2615 aa6.46□□□□□ -1.38
MSH2-202ENST00000406134 TRBV7-4A0A0J9YYF1 115 aa6.45□□□□□ -1.38
MSH2-202ENST00000406134 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
MSH2-202ENST00000406134 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
MSH2-202ENST00000406134 RBM3P98179 157 aaKnown RBP6.44□□□□□ -1.38
MSH2-202ENST00000406134 TRBV7-6A0A0J9YX20 115 aa6.44□□□□□ -1.38
MSH2-202ENST00000406134 ATP5EP2Q5VTU8 51 aa6.43□□□□□ -1.38
MSH2-202ENST00000406134 KRTAP7-1Q8IUC3 87 aa6.43□□□□□ -1.38
MSH2-202ENST00000406134 NDUFC2-KCTD14E9PQ53 114 aa6.43□□□□□ -1.38
MSH2-202ENST00000406134 DIRC1Q969H9 104 aa6.43□□□□□ -1.38
MSH2-202ENST00000406134 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
MSH2-202ENST00000406134 Q6ZVQ6 151 aa6.42□□□□□ -1.38
MSH2-202ENST00000406134 C20orf197Q8N268 126 aa6.42□□□□□ -1.38
MSH2-202ENST00000406134 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
MSH2-202ENST00000406134 LINC01547P58512 204 aaPredicted RBP6.42□□□□□ -1.38
MSH2-202ENST00000406134 LINC01556Q5JQF7 62 aa6.42□□□□□ -1.38
MSH2-202ENST00000406134 SERTAD4-AS1Q5TG53 156 aa6.42□□□□□ -1.38
MSH2-202ENST00000406134 KRTAP24-1Q3LI83 254 aa6.41□□□□□ -1.38
MSH2-202ENST00000406134 COX7BP24311 80 aa6.4□□□□□ -1.38
MSH2-202ENST00000406134 CASC10Q5T4H9 136 aa6.4□□□□□ -1.38
MSH2-202ENST00000406134 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.4□□□□□ -1.38
MSH2-202ENST00000406134 M0R378 163 aa6.4□□□□□ -1.39
MSH2-202ENST00000406134 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
MSH2-202ENST00000406134 LAMTOR3Q9UHA4 124 aa6.39□□□□□ -1.39
MSH2-202ENST00000406134 PRKDCP78527 4128 aaKnown RBP6.39□□□□□ -1.39
MSH2-202ENST00000406134 DNAH10OSP0CZ25 163 aa6.38□□□□□ -1.39
MSH2-202ENST00000406134 HECTD4Q9Y4D8 3996 aa6.38□□□□□ -1.39
MSH2-202ENST00000406134 UBL5Q9BZL1 73 aa6.38□□□□□ -1.39
MSH2-202ENST00000406134 TRAV10A0A0B4J240 114 aa6.38□□□□□ -1.39
MSH2-202ENST00000406134 GHRHP01286 108 aa6.38□□□□□ -1.39
MSH2-202ENST00000406134 SERP1Q9Y6X1 66 aa6.38□□□□□ -1.39
MSH2-202ENST00000406134 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
MSH2-202ENST00000406134 DEFB131BA0A096LNP1 70 aa6.37□□□□□ -1.39
MSH2-202ENST00000406134 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
MSH2-202ENST00000406134 SMIM26A0A096LP01 95 aa6.36□□□□□ -1.39
MSH2-202ENST00000406134 CXCL6P80162 114 aa6.36□□□□□ -1.39
MSH2-202ENST00000406134 MPLKIPQ8TAP9 179 aa6.36□□□□□ -1.39
MSH2-202ENST00000406134 LINC00474Q9P2X8 69 aa6.36□□□□□ -1.39
MSH2-202ENST00000406134 TLX1NBP0CAT3 122 aa6.36□□□□□ -1.39
MSH2-202ENST00000406134 C7orf33Q8WU49 177 aa6.36□□□□□ -1.39
MSH2-202ENST00000406134 Q9BRP9 147 aa6.36□□□□□ -1.39
MSH2-202ENST00000406134 STARD9Q9P2P6 4700 aa6.35□□□□□ -1.39
MSH2-202ENST00000406134 Q8N377 158 aa6.35□□□□□ -1.39
MSH2-202ENST00000406134 LINC00588Q9Y4M8 146 aa6.35□□□□□ -1.39
MSH2-202ENST00000406134 H3BQ85 93 aa6.35□□□□□ -1.39
MSH2-202ENST00000406134 FRAS1Q86XX4 4008 aa6.35□□□□□ -1.39
MSH2-202ENST00000406134 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
MSH2-202ENST00000406134 SYCNQ0VAF6 134 aa6.34□□□□□ -1.39
MSH2-202ENST00000406134 C11orf45Q8TAV5 145 aa6.34□□□□□ -1.39
MSH2-202ENST00000406134 SPRR1AP35321 89 aa6.34□□□□□ -1.39
MSH2-202ENST00000406134 PDE6GP18545 87 aa6.33□□□□□ -1.4
MSH2-202ENST00000406134 FP248Q71RG6 208 aaPredicted RBP6.33□□□□□ -1.4
MSH2-202ENST00000406134 PLA2G2DQ9UNK4 145 aa6.33□□□□□ -1.4
MSH2-202ENST00000406134 IGLV5-37A0A075B6J1 123 aa6.33□□□□□ -1.4
MSH2-202ENST00000406134 TNP2Q05952 138 aa6.33□□□□□ -1.4
MSH2-202ENST00000406134 SCXQ7RTU7 201 aa6.33□□□□□ -1.4
MSH2-202ENST00000406134 DNAH2Q9P225 4427 aa6.32□□□□□ -1.4
MSH2-202ENST00000406134 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
MSH2-202ENST00000406134 SNURFQ9Y675 71 aa6.32□□□□□ -1.4
MSH2-202ENST00000406134 IGLV5-48A0A075B6I7 105 aa6.31□□□□□ -1.4
MSH2-202ENST00000406134 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
MSH2-202ENST00000406134 SRRM2Q9UQ35 2752 aaKnown RBP6.31□□□□□ -1.4
MSH2-202ENST00000406134 IGLV1-50A0A075B6I6 118 aa6.31□□□□□ -1.4
MSH2-202ENST00000406134 HAMPP81172 84 aa6.31□□□□□ -1.4
MSH2-202ENST00000406134 BCE1O60756 84 aa6.31□□□□□ -1.4
MSH2-202ENST00000406134 H7BZZ5 65 aa6.3□□□□□ -1.4
MSH2-202ENST00000406134 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
MSH2-202ENST00000406134 TM2D3Q9BRN9 247 aa6.3□□□□□ -1.4
MSH2-202ENST00000406134 PRB2P02812 416 aaPredicted RBP6.3□□□□□ -1.4
MSH2-202ENST00000406134 Q6ZRX8 168 aa6.3□□□□□ -1.4
MSH2-202ENST00000406134 KMT2AQ03164 3969 aa6.29□□□□□ -1.4
MSH2-202ENST00000406134 TRAV7A0A075B6U4 112 aa6.29□□□□□ -1.4
MSH2-202ENST00000406134 Q8N9L7 120 aa6.29□□□□□ -1.4
MSH2-202ENST00000406134 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
MSH2-202ENST00000406134 RPL37AP8A6NKH3 93 aa6.29□□□□□ -1.4
MSH2-202ENST00000406134 EPM2AB3EWF7 344 aa6.29□□□□□ -1.4
MSH2-202ENST00000406134 ERC2-IT1O76042 136 aa6.29□□□□□ -1.4
MSH2-202ENST00000406134 KRTAP1-5Q9BYS1 174 aa6.29□□□□□ -1.4
MSH2-202ENST00000406134 ST20-AS1Q8NBB2 130 aa6.29□□□□□ -1.4
MSH2-202ENST00000406134 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
MSH2-202ENST00000406134 A0A1W2PNM2 257 aa6.28□□□□□ -1.4
MSH2-202ENST00000406134 F8WEM9 126 aa6.28□□□□□ -1.4
MSH2-202ENST00000406134 RMI2Q96E14 147 aa6.27□□□□□ -1.41
MSH2-202ENST00000406134 K7EIL1 84 aa6.26□□□□□ -1.41
MSH2-202ENST00000406134 BPY2O14599 106 aa6.26□□□□□ -1.41
MSH2-202ENST00000406134 FBN3Q75N90 2809 aa6.26□□□□□ -1.41
MSH2-202ENST00000406134 TENM2Q9NT68 2774 aa6.26□□□□□ -1.41
MSH2-202ENST00000406134 PRYO14603 147 aa6.25□□□□□ -1.41
MSH2-202ENST00000406134 SMIM29Q86T20 159 aa6.25□□□□□ -1.41
MSH2-202ENST00000406134 NKAPP1Q8N9T2 125 aa6.25□□□□□ -1.41
MSH2-202ENST00000406134 C3orf84H3BNL1 204 aa6.25□□□□□ -1.41
MSH2-202ENST00000406134 DEFB105AQ8NG35 78 aa6.25□□□□□ -1.41
MSH2-202ENST00000406134 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
MSH2-202ENST00000406134 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
MSH2-202ENST00000406134 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
MSH2-202ENST00000406134 MRPL55Q7Z7F7 128 aaKnown RBP6.23□□□□□ -1.41
MSH2-202ENST00000406134 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
MSH2-202ENST00000406134 DHRS4-AS1Q9P1J3 65 aa6.22□□□□□ -1.41
MSH2-202ENST00000406134 ALMS1Q8TCU4 4167 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms