RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 LENEPQ9Y5L5 61 aa0.71□□□□□ -2.3
CBX3P1-201ENST00000325243 LINC01558Q9Y6Z2 57 aa0.71□□□□□ -2.3
CBX3P1-201ENST00000325243 ZDBF2Q9HCK1 2354 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 COL6A3P12111 3177 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 CACNA1BQ00975 2339 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 ACACAQ13085 2346 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 CXorf51AA0A1B0GTR3 108 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 PDE6GP18545 87 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 LINC00308Q8TCZ7 52 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 GAFA1Q96PS6 74 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 CNFNQ9BYD5 112 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 A0A0C4DFX4 3053 aa0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 PTPRZ1P23471 2315 aaPredicted RBP0.7□□□□□ -2.3
CBX3P1-201ENST00000325243 WDR87Q6ZQQ6 2873 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 LCE6AA0A183 80 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 ETDCA0A1B0GVM5 59 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 CLPSL1A2RUU4 121 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 H0Y9P7 68 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 NDUFA4O00483 81 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 NDUFA1O15239 70 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 LYNX1P0DP58 116 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 CRIP1P50238 77 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 RPL37AP61513 92 aaKnown RBP0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 PRCDQ00LT1 54 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 DEFB114Q30KQ6 69 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 DEFB112Q30KQ8 113 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 SMIM11BQ8TCY0 68 aa0.69□□□□□ -2.3
CBX3P1-201ENST00000325243 ANKRD17O75179 2603 aaKnown RBP0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 SPTBN1Q01082 2364 aaKnown RBP0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 IGKV2-40A0A087WW87 121 aaPredicted RBP0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 IGKV2-29A2NJV5 120 aaPredicted RBP0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 APC2O95996 2303 aa0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 IGKV2D-40P01614 121 aaPredicted RBP0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 CCL18P55774 89 aa0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 SPINK7P58062 85 aa0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 RPL39P62891 51 aaKnown RBP0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 PRB3Q04118 309 aaPredicted RBP0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 RPL39LQ96EH5 51 aaKnown RBP0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 DMAC1Q96GE9 116 aa0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 PLAC8Q9NZF1 115 aa0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 PKDREJQ9NTG1 2253 aa0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 SPTBN2O15020 2390 aa0.68□□□□□ -2.3
CBX3P1-201ENST00000325243 PCNTO95613 3336 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 CACNA1EQ15878 2313 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 CHD7Q9P2D1 2997 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 NBDYA0A0U1RRE5 68 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 LINC00959A0A1B0GUT2 108 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 UQCR11O14957 56 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 STATHP02808 62 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 COX7BP24311 80 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 POLR2KP53803 58 aaKnown RBP0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 LINC00158P58513 81 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 SPATA8Q6RVD6 105 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 Q6ZSA8 131 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 LEAP2Q969E1 77 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 KCNQ1DNQ9H478 68 aa0.67□□□□□ -2.3
CBX3P1-201ENST00000325243 IGF2RP11717 2491 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 CEP350Q5VT06 3117 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 A0A1B0GU69 56 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 DEFB108AA8MXU0 73 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 MRPL33O75394 65 aaKnown RBP0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 CCL3L1P16619 93 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 RPL39P5Q59GN2 51 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 Q6ZQY7 126 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 DEFB119Q8N690 84 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 TMEM167AQ8TBQ9 72 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 SPRR4Q96PI1 79 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 CSPG4Q6UVK1 2322 aa0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 GOLGB1Q14789 3259 aaKnown RBP0.66□□□□□ -2.3
CBX3P1-201ENST00000325243 TPRP12270 2363 aaKnown RBP0.65□□□□□ -2.3
CBX3P1-201ENST00000325243 AKAP6Q13023 2319 aa0.65□□□□□ -2.3
CBX3P1-201ENST00000325243 RANBP2P49792 3224 aaKnown RBP0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 SPTA1P02549 2419 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 CEP250Q9BV73 2442 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 TRGV1A0A0A0MS02 117 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 H0YGG7 62 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 KRTAP10-4P60372 401 aaPredicted RBP0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 WT1-ASQ06250 92 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 COX17Q14061 63 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 LINC00575Q6W349 94 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 DEFB132Q7Z7B7 95 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 C5orf56Q8N8D9 126 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 DEFB104AQ8WTQ1 72 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 CCL19Q99731 98 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 CDKN2A-AS1Q9UH64 79 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 MAP1BP46821 2468 aaKnown RBP0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 CREBBPQ92793 2442 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 NBPF19A0A087WUL8 3843 aa0.65□□□□□ -2.31
CBX3P1-201ENST00000325243 USP34Q70CQ2 3546 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 DEFB131BA0A096LNP1 70 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 A0A096LNT2 108 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 I3L2K1 104 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 M0QY20 66 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 ACYP2P14621 99 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 COX6A2Q02221 97 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 Q8IZM0 81 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 LINC00472Q9H8W2 130 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms