RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 IGLV5-52A0A0A0MRZ9 124 aa8.47□□□□□ -1.05
PPP1CB-201ENST00000296122 IGLV5-37A0A075B6J1 123 aa8.47□□□□□ -1.05
PPP1CB-201ENST00000296122 CHTF8P0CG12 524 aa8.47□□□□□ -1.05
PPP1CB-201ENST00000296122 IGLV1-50A0A075B6I6 118 aa8.47□□□□□ -1.05
PPP1CB-201ENST00000296122 UBE2AP49459 152 aa8.47□□□□□ -1.05
PPP1CB-201ENST00000296122 F8WEM9 126 aa8.46□□□□□ -1.05
PPP1CB-201ENST00000296122 HIGD2AQ9BW72 106 aa8.46□□□□□ -1.06
PPP1CB-201ENST00000296122 FAM240AA0A1B0GVK7 77 aa8.46□□□□□ -1.06
PPP1CB-201ENST00000296122 LINC00476Q8WZB0 136 aa8.46□□□□□ -1.06
PPP1CB-201ENST00000296122 CMYA5Q8N3K9 4069 aa8.45□□□□□ -1.06
PPP1CB-201ENST00000296122 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
PPP1CB-201ENST00000296122 PDE6GP18545 87 aa8.45□□□□□ -1.06
PPP1CB-201ENST00000296122 LINC00528Q8N1L1 170 aa8.45□□□□□ -1.06
PPP1CB-201ENST00000296122 RTL8CO15255 209 aa8.45□□□□□ -1.06
PPP1CB-201ENST00000296122 Q6ZRX8 168 aa8.44□□□□□ -1.06
PPP1CB-201ENST00000296122 DNAH3Q8TD57 4116 aa8.43□□□□□ -1.06
PPP1CB-201ENST00000296122 NDUFV3P56181 108 aaKnown RBP8.42□□□□□ -1.06
PPP1CB-201ENST00000296122 UBL5Q9BZL1 73 aa8.42□□□□□ -1.06
PPP1CB-201ENST00000296122 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
PPP1CB-201ENST00000296122 PCP4P48539 62 aa8.41□□□□□ -1.06
PPP1CB-201ENST00000296122 PHF5AQ7RTV0 110 aaKnown RBP8.41□□□□□ -1.06
PPP1CB-201ENST00000296122 Q6ZRN7 208 aaPredicted RBP8.41□□□□□ -1.06
PPP1CB-201ENST00000296122 Q6ZR54 194 aa8.41□□□□□ -1.06
PPP1CB-201ENST00000296122 C21orf62-AS1Q17RA5 79 aa8.4□□□□□ -1.06
PPP1CB-201ENST00000296122 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.07
PPP1CB-201ENST00000296122 CDIP1Q9H305 208 aa8.4□□□□□ -1.07
PPP1CB-201ENST00000296122 MT-ATP8P03928 68 aa8.39□□□□□ -1.07
PPP1CB-201ENST00000296122 CCKP06307 115 aa8.39□□□□□ -1.07
PPP1CB-201ENST00000296122 PRLHP81277 87 aa8.39□□□□□ -1.07
PPP1CB-201ENST00000296122 B5MCH6 92 aa8.38□□□□□ -1.07
PPP1CB-201ENST00000296122 XGP55808 180 aa8.38□□□□□ -1.07
PPP1CB-201ENST00000296122 LINC00643Q86TS7 51 aa8.38□□□□□ -1.07
PPP1CB-201ENST00000296122 DNAH9Q9NYC9 4486 aa8.38□□□□□ -1.07
PPP1CB-201ENST00000296122 TENM2Q9NT68 2774 aa8.37□□□□□ -1.07
PPP1CB-201ENST00000296122 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.073e-18■□□□□ 8.6
PPP1CB-201ENST00000296122 COL7A1Q02388 2944 aa8.35□□□□□ -1.07
PPP1CB-201ENST00000296122 SPRR1AP35321 89 aa8.34□□□□□ -1.07
PPP1CB-201ENST00000296122 TNP2Q05952 138 aa8.34□□□□□ -1.07
PPP1CB-201ENST00000296122 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.07
PPP1CB-201ENST00000296122 HAMPP81172 84 aa8.33□□□□□ -1.08
PPP1CB-201ENST00000296122 OBSCN-AS1Q96MR7 158 aa8.33□□□□□ -1.08
PPP1CB-201ENST00000296122 SCGB1A1P11684 91 aa8.32□□□□□ -1.08
PPP1CB-201ENST00000296122 MEGF8Q7Z7M0 2845 aa8.32□□□□□ -1.08
PPP1CB-201ENST00000296122 ST20-AS1Q8NBB2 130 aa8.32□□□□□ -1.08
PPP1CB-201ENST00000296122 HIST1H4AP62805 103 aaKnown RBP8.31□□□□□ -1.08
PPP1CB-201ENST00000296122 KRTAP7-1Q8IUC3 87 aa8.31□□□□□ -1.08
PPP1CB-201ENST00000296122 Q9BRP9 147 aa8.31□□□□□ -1.08
PPP1CB-201ENST00000296122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
PPP1CB-201ENST00000296122 LOC110117498A0A087WWA1 95 aa8.3□□□□□ -1.08
PPP1CB-201ENST00000296122 IGKV3D-7A0A0C4DH55 119 aa8.3□□□□□ -1.08
PPP1CB-201ENST00000296122 SPACA4Q8TDM5 124 aa8.3□□□□□ -1.08
PPP1CB-201ENST00000296122 LINC00846Q9NV44 126 aa8.3□□□□□ -1.08
PPP1CB-201ENST00000296122 FBN3Q75N90 2809 aa8.3□□□□□ -1.08
PPP1CB-201ENST00000296122 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
PPP1CB-201ENST00000296122 BCE1O60756 84 aa8.3□□□□□ -1.08
PPP1CB-201ENST00000296122 Q6ZQT0 140 aa8.3□□□□□ -1.08
PPP1CB-201ENST00000296122 DNHD1Q96M86 4753 aa8.29□□□□□ -1.08
PPP1CB-201ENST00000296122 Q8N377 158 aa8.29□□□□□ -1.08
PPP1CB-201ENST00000296122 C3orf22Q8N5N4 141 aa8.29□□□□□ -1.08
PPP1CB-201ENST00000296122 TGP01266 2768 aa8.28□□□□□ -1.08
PPP1CB-201ENST00000296122 C1orf137Q5JT78 98 aa8.28□□□□□ -1.08
PPP1CB-201ENST00000296122 NREPQ16612 68 aa8.28□□□□□ -1.08
PPP1CB-201ENST00000296122 ERC2-IT1O76042 136 aa8.27□□□□□ -1.09
PPP1CB-201ENST00000296122 KRTAP4-16G5E9R7 235 aaPredicted RBP8.27□□□□□ -1.09
PPP1CB-201ENST00000296122 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
PPP1CB-201ENST00000296122 ATP5EP2Q5VTU8 51 aa8.26□□□□□ -1.09
PPP1CB-201ENST00000296122 ANAPC13Q9BS18 74 aa8.26□□□□□ -1.09
PPP1CB-201ENST00000296122 IMUPQ9GZP8 106 aa8.25□□□□□ -1.09
PPP1CB-201ENST00000296122 PANO1I0J062 215 aa8.25□□□□□ -1.09
PPP1CB-201ENST00000296122 Q6JHZ5 121 aa8.25□□□□□ -1.09
PPP1CB-201ENST00000296122 TRBV7-4A0A0J9YYF1 115 aa8.24□□□□□ -1.09
PPP1CB-201ENST00000296122 H0Y9J4 135 aa8.23□□□□□ -1.09
PPP1CB-201ENST00000296122 Q6Q795 121 aa8.23□□□□□ -1.09
PPP1CB-201ENST00000296122 C9orf153Q5TBE3 101 aa8.23□□□□□ -1.09
PPP1CB-201ENST00000296122 IGLV5-48A0A075B6I7 105 aa8.23□□□□□ -1.09
PPP1CB-201ENST00000296122 PLAC8Q9NZF1 115 aa8.21□□□□□ -1.09
PPP1CB-201ENST00000296122 FAM236AA0A1B0GUQ0 79 aa8.21□□□□□ -1.1
PPP1CB-201ENST00000296122 FAM236BA0A1B0GV22 79 aa8.21□□□□□ -1.1
PPP1CB-201ENST00000296122 Q6ZVQ6 151 aa8.2□□□□□ -1.1
PPP1CB-201ENST00000296122 PSORS1C2Q9UIG4 136 aa8.2□□□□□ -1.1
PPP1CB-201ENST00000296122 TRBV7-7A0A0K0K1E9 115 aa8.2□□□□□ -1.1
PPP1CB-201ENST00000296122 BPY2O14599 106 aa8.18□□□□□ -1.1
PPP1CB-201ENST00000296122 PRKDCP78527 4128 aaKnown RBP8.18□□□□□ -1.1
PPP1CB-201ENST00000296122 IGLV9-49A0A0B4J1Y8 123 aa8.18□□□□□ -1.1
PPP1CB-201ENST00000296122 KRTAP10-2P60368 255 aa8.18□□□□□ -1.1
PPP1CB-201ENST00000296122 LINC00336Q6ZUF6 198 aa8.18□□□□□ -1.1
PPP1CB-201ENST00000296122 Q8NBF4 154 aa8.17□□□□□ -1.1
PPP1CB-201ENST00000296122 A0A1B0GW54 56 aa8.17□□□□□ -1.1
PPP1CB-201ENST00000296122 SCXQ7RTU7 201 aa8.17□□□□□ -1.1
PPP1CB-201ENST00000296122 LCE6AA0A183 80 aa8.16□□□□□ -1.1
PPP1CB-201ENST00000296122 LINC01547P58512 204 aaPredicted RBP8.16□□□□□ -1.1
PPP1CB-201ENST00000296122 ZNF861PO60384 105 aa8.16□□□□□ -1.1
PPP1CB-201ENST00000296122 KRTAP11-1Q8IUC1 163 aa8.16□□□□□ -1.1
PPP1CB-201ENST00000296122 CIRBP-AS1Q8TBR5 109 aa8.14□□□□□ -1.11
PPP1CB-201ENST00000296122 PLECQ15149 4684 aaKnown RBP8.14□□□□□ -1.11
PPP1CB-201ENST00000296122 ATOX1O00244 68 aa8.12□□□□□ -1.11
PPP1CB-201ENST00000296122 A0A087WSZ3 146 aa8.12□□□□□ -1.11
PPP1CB-201ENST00000296122 IGFL1Q6UW32 110 aa8.11□□□□□ -1.11
PPP1CB-201ENST00000296122 IGLV7-43P04211 117 aa8.11□□□□□ -1.11
PPP1CB-201ENST00000296122 CXCL6P80162 114 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms