RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 CSPG4Q6UVK1 2322 aa7.03□□□□□ -1.28
KNOP1-201ENST00000219837 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
KNOP1-201ENST00000219837 KRTAP1-1Q07627 177 aa7.01□□□□□ -1.29
KNOP1-201ENST00000219837 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
KNOP1-201ENST00000219837 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
KNOP1-201ENST00000219837 LINC00483Q53H64 154 aa6.99□□□□□ -1.29
KNOP1-201ENST00000219837 S4R3F8 94 aa6.99□□□□□ -1.29
KNOP1-201ENST00000219837 CD164Q04900 197 aa6.99□□□□□ -1.29
KNOP1-201ENST00000219837 H7BZZ5 65 aa6.99□□□□□ -1.29
KNOP1-201ENST00000219837 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
KNOP1-201ENST00000219837 KTN1-AS1Q86SY8 53 aa6.98□□□□□ -1.29
KNOP1-201ENST00000219837 MUC4Q99102 2169 aa6.97□□□□□ -1.29
KNOP1-201ENST00000219837 CUL9Q8IWT3 2517 aa6.97□□□□□ -1.29
KNOP1-201ENST00000219837 PTPN13Q12923 2485 aa6.95□□□□□ -1.3
KNOP1-201ENST00000219837 EP400Q96L91 3159 aa6.95□□□□□ -1.3
KNOP1-201ENST00000219837 LUZP6Q538Z0 58 aa6.94□□□□□ -1.3
KNOP1-201ENST00000219837 LCA10Q71F78 164 aa6.94□□□□□ -1.3
KNOP1-201ENST00000219837 HRES1P13985 223 aa6.91□□□□□ -1.3
KNOP1-201ENST00000219837 SRCAPQ6ZRS2 3230 aa6.9□□□□□ -1.3
KNOP1-201ENST00000219837 A0A1B0GU33 70 aa6.9□□□□□ -1.31
KNOP1-201ENST00000219837 ZCCHC13Q8WW36 166 aaKnown RBP6.89□□□□□ -1.31
KNOP1-201ENST00000219837 Q1T7F1 81 aa6.88□□□□□ -1.31
KNOP1-201ENST00000219837 FAM229BQ4G0N7 80 aa6.88□□□□□ -1.31
KNOP1-201ENST00000219837 PLAC8Q9NZF1 115 aa6.86□□□□□ -1.31
KNOP1-201ENST00000219837 Q5VSD8 79 aa6.85□□□□□ -1.31
KNOP1-201ENST00000219837 SPG11Q96JI7 2443 aa6.85□□□□□ -1.31
KNOP1-201ENST00000219837 CSAG1Q6PB30 78 aa6.83□□□□□ -1.32
KNOP1-201ENST00000219837 OCR1Q9BZK8 76 aa6.83□□□□□ -1.32
KNOP1-201ENST00000219837 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
KNOP1-201ENST00000219837 NAV2Q8IVL1 2488 aa6.8□□□□□ -1.32
KNOP1-201ENST00000219837 MMP24-AS1A0A0U1RRL7 71 aa6.79□□□□□ -1.32
KNOP1-201ENST00000219837 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.32
KNOP1-201ENST00000219837 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
KNOP1-201ENST00000219837 Q75L30 129 aa6.77□□□□□ -1.33
KNOP1-201ENST00000219837 Q5W150 140 aa6.76□□□□□ -1.33
KNOP1-201ENST00000219837 PIEZO2Q9H5I5 2752 aa6.76□□□□□ -1.33
KNOP1-201ENST00000219837 LRRK2Q5S007 2527 aa6.75□□□□□ -1.33
KNOP1-201ENST00000219837 ABCA2Q9BZC7 2435 aa6.74□□□□□ -1.33
KNOP1-201ENST00000219837 R4GN34 69 aa6.74□□□□□ -1.33
KNOP1-201ENST00000219837 SPINK7P58062 85 aa6.72□□□□□ -1.33
KNOP1-201ENST00000219837 Q8NDZ9 215 aa6.71□□□□□ -1.33
KNOP1-201ENST00000219837 ACACBO00763 2458 aa6.71□□□□□ -1.34
KNOP1-201ENST00000219837 KRTAP10-1P60331 282 aa6.71□□□□□ -1.34
KNOP1-201ENST00000219837 WIPF1O43516 503 aa6.7□□□□□ -1.34
KNOP1-201ENST00000219837 IGF2RP11717 2491 aa6.7□□□□□ -1.34
KNOP1-201ENST00000219837 CR1P17927 2039 aa6.7□□□□□ -1.34
KNOP1-201ENST00000219837 SONP18583 2426 aaKnown RBP6.69□□□□□ -1.34
KNOP1-201ENST00000219837 BDP1A6H8Y1 2624 aa6.69□□□□□ -1.34
KNOP1-201ENST00000219837 LCE6AA0A183 80 aa6.69□□□□□ -1.34
KNOP1-201ENST00000219837 KRTAP10-2P60368 255 aa6.69□□□□□ -1.34
KNOP1-201ENST00000219837 LINC01558Q9Y6Z2 57 aa6.69□□□□□ -1.34
KNOP1-201ENST00000219837 ATRXP46100 2492 aa6.68□□□□□ -1.34
KNOP1-201ENST00000219837 SPRR1AP35321 89 aa6.67□□□□□ -1.34
KNOP1-201ENST00000219837 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
KNOP1-201ENST00000219837 M0QZ58 72 aa6.66□□□□□ -1.34
KNOP1-201ENST00000219837 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.34
KNOP1-201ENST00000219837 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
KNOP1-201ENST00000219837 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
KNOP1-201ENST00000219837 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
KNOP1-201ENST00000219837 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
KNOP1-201ENST00000219837 OXTP01178 125 aa6.62□□□□□ -1.35
KNOP1-201ENST00000219837 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
KNOP1-201ENST00000219837 CCDC168Q8NDH2 2452 aa6.6□□□□□ -1.35
KNOP1-201ENST00000219837 SPRR1BP22528 89 aa6.6□□□□□ -1.35
KNOP1-201ENST00000219837 ROMO1P60602 79 aa6.6□□□□□ -1.35
KNOP1-201ENST00000219837 ANKRD17O75179 2603 aaKnown RBP6.6□□□□□ -1.35
KNOP1-201ENST00000219837 NCOR2Q9Y618 2525 aa6.58□□□□□ -1.36
KNOP1-201ENST00000219837 NOTCH2Q04721 2471 aa6.58□□□□□ -1.36
KNOP1-201ENST00000219837 Q5VV11 94 aa6.58□□□□□ -1.36
KNOP1-201ENST00000219837 A0A0A0MQY5 61 aa6.56□□□□□ -1.36
KNOP1-201ENST00000219837 FP248Q71RG6 208 aaPredicted RBP6.56□□□□□ -1.36
KNOP1-201ENST00000219837 TTC28Q96AY4 2481 aa6.55□□□□□ -1.36
KNOP1-201ENST00000219837 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
KNOP1-201ENST00000219837 Q6ZR54 194 aa6.55□□□□□ -1.36
KNOP1-201ENST00000219837 Q5XG85 94 aa6.55□□□□□ -1.36
KNOP1-201ENST00000219837 CYSTM1Q9H1C7 97 aa6.53□□□□□ -1.36
KNOP1-201ENST00000219837 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
KNOP1-201ENST00000219837 PANO1I0J062 215 aa6.5□□□□□ -1.37
KNOP1-201ENST00000219837 C2CD3Q4AC94 2353 aa6.47□□□□□ -1.37
KNOP1-201ENST00000219837 A0A087X002 238 aa6.46□□□□□ -1.38
KNOP1-201ENST00000219837 GOLGB1Q14789 3259 aaKnown RBP6.46□□□□□ -1.38
KNOP1-201ENST00000219837 FN1P02751 2386 aaKnown RBP6.44□□□□□ -1.38
KNOP1-201ENST00000219837 H3BS24 57 aa6.44□□□□□ -1.38
KNOP1-201ENST00000219837 MYO9AB2RTY4 2548 aa6.42□□□□□ -1.38
KNOP1-201ENST00000219837 ZNF462Q96JM2 2506 aa6.42□□□□□ -1.38
KNOP1-201ENST00000219837 ABCA12Q86UK0 2595 aa6.4□□□□□ -1.39
KNOP1-201ENST00000219837 WDR87Q6ZQQ6 2873 aa6.39□□□□□ -1.39
KNOP1-201ENST00000219837 CACNA1AO00555 2505 aa6.37□□□□□ -1.39
KNOP1-201ENST00000219837 KRTAP4-16G5E9R7 235 aaPredicted RBP6.37□□□□□ -1.39
KNOP1-201ENST00000219837 A8MUU9 505 aa6.36□□□□□ -1.39
KNOP1-201ENST00000219837 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
KNOP1-201ENST00000219837 C20orf166-AS1Q96NR2 134 aa6.34□□□□□ -1.39
KNOP1-201ENST00000219837 TLN1Q9Y490 2541 aaKnown RBP6.32□□□□□ -1.4
KNOP1-201ENST00000219837 KRTAP11-1Q8IUC1 163 aa6.32□□□□□ -1.4
KNOP1-201ENST00000219837 JMJD1CQ15652 2540 aa6.32□□□□□ -1.4
KNOP1-201ENST00000219837 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
KNOP1-201ENST00000219837 KRTAP29-1A8MX34 341 aaPredicted RBP6.31□□□□□ -1.4
KNOP1-201ENST00000219837 CENPFP49454 3210 aa6.3□□□□□ -1.4
KNOP1-201ENST00000219837 A8MU10 97 aa6.29□□□□□ -1.4
KNOP1-201ENST00000219837 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms