RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 RPL39LQ96EH5 51 aaKnown RBP2.82□□□□□ -1.96
RDH11-204ENST00000553578 LENEPQ9Y5L5 61 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 MYO9AB2RTY4 2548 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 CLPSL1A2RUU4 121 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 RPL39P62891 51 aaKnown RBP2.82□□□□□ -1.96
RDH11-204ENST00000553578 LINC01554Q52M75 96 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 DIRC1Q969H9 104 aa2.82□□□□□ -1.96
RDH11-204ENST00000553578 TLN2Q9Y4G6 2542 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 LINC00313P59037 77 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 Q1T7F1 81 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 PRR15LQ9BU68 103 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 DCHS2Q6V1P9 2916 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 KMT2BQ9UMN6 2715 aaPredicted RBP2.81□□□□□ -1.96
RDH11-204ENST00000553578 IGHV3-16A0A0C4DH30 117 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 IGHV1-69P01742 117 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 ANK3Q12955 4377 aaKnown RBP2.81□□□□□ -1.96
RDH11-204ENST00000553578 C16orf90A8MZG2 172 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 CTSGP08311 255 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 IGHV3-30-3P0DP02 117 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 AMELXQ99217 191 aa2.81□□□□□ -1.96
RDH11-204ENST00000553578 BCE1O60756 84 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 CRPP02741 224 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 PHF5AQ7RTV0 110 aaKnown RBP2.8□□□□□ -1.96
RDH11-204ENST00000553578 CAMK2N1Q7Z7J9 78 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 LINC00467Q9BRT7 94 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 CR1P17927 2039 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 IGKV3D-20A0A0C4DH25 116 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 LECT2O14960 151 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 HIGD2BQ4VC39 106 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 USMG5Q96IX5 58 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 USP9YO00507 2555 aaPredicted RBP2.8□□□□□ -1.96
RDH11-204ENST00000553578 IGIPA6NJ69 53 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 MIR7-3HGQ8N6C7 128 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 SMAD5-AS1Q9Y6J3 95 aa2.8□□□□□ -1.96
RDH11-204ENST00000553578 TRBV10-3A0A0K0K1G6 114 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 DEFB1P60022 68 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 C9orf129Q5T035 196 aaKnown RBP2.79□□□□□ -1.96
RDH11-204ENST00000553578 hDV103S1A0JD37 113 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 C9orf47Q6ZRZ4 202 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 ORMDL1Q9P0S3 153 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 SPTBN4Q9H254 2564 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 POLQO75417 2590 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 A0A087X002 238 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 PPP1R17O96001 155 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 RETNLBQ9BQ08 111 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 ANK2Q01484 3957 aa2.79□□□□□ -1.96
RDH11-204ENST00000553578 A0A0J9YX75 114 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 HTN1P15515 57 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 C1orf64Q8NEQ6 169 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 FAM208BQ5VWN6 2430 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 IGHV3-73A0A0B4J1V6 119 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 B4DSR2 109 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 NDUFA4O00483 81 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 MSMBP08118 114 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 C18orf65Q6ZTR6 163 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 HIGD2AQ9BW72 106 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 CELSR1Q9NYQ6 3014 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 FLG2Q5D862 2391 aaPredicted RBP2.78□□□□□ -1.96
RDH11-204ENST00000553578 DNAH3Q8TD57 4116 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 IGHV3OR16-9A0A0B4J2B5 98 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 TRBV10-1A0A0K0K1A3 114 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 BPY2O14599 106 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 IGKV3-20P01619 116 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 FAM74A4Q5TZK3 123 aa2.78□□□□□ -1.96
RDH11-204ENST00000553578 A0A087WYN8 130 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 A6NN06 94 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 USP9XQ93008 2570 aaPredicted RBP2.77□□□□□ -1.97
RDH11-204ENST00000553578 MUC6Q6W4X9 2439 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 JMJD7-PLA2G4BH0Y9G9 81 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 LINC00308Q8TCZ7 52 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 C8orf17Q9NRJ1 99 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 ABCA2Q9BZC7 2435 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 TRBV7-4A0A0J9YYF1 115 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 KRTAP1-1Q07627 177 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 CSMD2Q7Z408 3487 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 Q5VV11 94 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 CCL19Q99731 98 aa2.77□□□□□ -1.97
RDH11-204ENST00000553578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 Q6ZTC4 211 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 Q6ZTI0 123 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 LITAFQ99732 161 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 C22orf24Q9Y442 160 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 CCDC168Q8NDH2 2452 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 H0YGX0 51 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 C9orf116Q5BN46 136 aaPredicted RBP2.76□□□□□ -1.97
RDH11-204ENST00000553578 FBN2P35556 2912 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 ACACBO00763 2458 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 JMJD1CQ15652 2540 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 DEFB116Q30KQ4 102 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 C14orf177Q52M58 125 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 KIF25-AS1Q9Y6Z4 181 aa2.76□□□□□ -1.97
RDH11-204ENST00000553578 TRBV6-8A0A0A6YYG3 113 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 IGHV3-11P01762 117 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 DEFB113Q30KQ7 82 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 LINC00242Q5T6M2 205 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 LIMD2Q9BT23 127 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 G3V318 75 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 PSCAO43653 123 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 LY6G6DO95868 133 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms