RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 FRAS1Q86XX4 4008 aa1.05□□□□□ -2.24
MDM2-230ENST00000543323 DDX60LQ5H9U9 1706 aaKnown RBP1.04□□□□□ -2.24
MDM2-230ENST00000543323 BCE1O60756 84 aa1.04□□□□□ -2.24
MDM2-230ENST00000543323 PRH1P02810 166 aa1.04□□□□□ -2.24
MDM2-230ENST00000543323 SERP2Q8N6R1 65 aa1.04□□□□□ -2.24
MDM2-230ENST00000543323 TRGV9Q99603 122 aa1.04□□□□□ -2.24
MDM2-230ENST00000543323 MYH4Q9Y623 1939 aa1.04□□□□□ -2.24
MDM2-230ENST00000543323 H7BZZ5 65 aa1.03□□□□□ -2.24
MDM2-230ENST00000543323 CENPFP49454 3210 aa1.03□□□□□ -2.24
MDM2-230ENST00000543323 TRBV25-1A0A075B6N4 114 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 A0A0G2JMZ2 1700 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 TNRC18O15417 2968 aaPredicted RBP1.02□□□□□ -2.25
MDM2-230ENST00000543323 KRTAP2-3P0C7H8 128 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 CACNA1CQ13936 2221 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 MYO7BQ6PIF6 2116 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 SPINK6Q6UWN8 80 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 KRTAP2-4Q9BYR9 128 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 KRTAP2-1Q9BYU5 128 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 BRCA2P51587 3418 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 HTTP42858 3142 aa1.02□□□□□ -2.25
MDM2-230ENST00000543323 PDCD11Q14690 1871 aaKnown RBP1.01□□□□□ -2.25
MDM2-230ENST00000543323 C10orf113Q5VZT2 155 aa1.01□□□□□ -2.25
MDM2-230ENST00000543323 TTC28Q96AY4 2481 aa1.01□□□□□ -2.25
MDM2-230ENST00000543323 RANBP2P49792 3224 aaKnown RBP1□□□□□ -2.25
MDM2-230ENST00000543323 PMCHL1Q16048 86 aa1□□□□□ -2.25
MDM2-230ENST00000543323 SMR3AQ99954 134 aa1□□□□□ -2.25
MDM2-230ENST00000543323 SPCS1Q9Y6A9 102 aa1□□□□□ -2.25
MDM2-230ENST00000543323 MKI67P46013 3256 aaKnown RBP1□□□□□ -2.25
MDM2-230ENST00000543323 FAM208BQ5VWN6 2430 aa0.99□□□□□ -2.25
MDM2-230ENST00000543323 LAMA3Q16787 3333 aa0.99□□□□□ -2.25
MDM2-230ENST00000543323 TRBV7-7A0A0K0K1E9 115 aa0.99□□□□□ -2.25
MDM2-230ENST00000543323 FAUP35544 74 aaKnown RBP0.99□□□□□ -2.25
MDM2-230ENST00000543323 DEFB123Q8N688 67 aa0.99□□□□□ -2.25
MDM2-230ENST00000543323 PRO1933Q9H354 126 aa0.99□□□□□ -2.25
MDM2-230ENST00000543323 DNAH12Q6ZR08 3092 aa0.99□□□□□ -2.25
MDM2-230ENST00000543323 SZT2Q5T011 3432 aa0.99□□□□□ -2.25
MDM2-230ENST00000543323 BDP1A6H8Y1 2624 aa0.99□□□□□ -2.25
MDM2-230ENST00000543323 NCOR1O75376 2440 aa0.98□□□□□ -2.25
MDM2-230ENST00000543323 CDH23Q9H251 3354 aa0.98□□□□□ -2.25
MDM2-230ENST00000543323 SYS1-DBNDD2H3BUS1 97 aa0.98□□□□□ -2.25
MDM2-230ENST00000543323 UQCRHP07919 91 aa0.98□□□□□ -2.25
MDM2-230ENST00000543323 ASIPP42127 132 aa0.98□□□□□ -2.25
MDM2-230ENST00000543323 LINC00846Q9NV44 126 aa0.98□□□□□ -2.25
MDM2-230ENST00000543323 PRO0255Q9UI72 69 aa0.98□□□□□ -2.25
MDM2-230ENST00000543323 UNC80Q8N2C7 3258 aa0.98□□□□□ -2.25
MDM2-230ENST00000543323 LAMA2P24043 3122 aaKnown RBP0.98□□□□□ -2.25
MDM2-230ENST00000543323 APCP25054 2843 aa0.97□□□□□ -2.25
MDM2-230ENST00000543323 PLIN4Q96Q06 1357 aa0.97□□□□□ -2.25
MDM2-230ENST00000543323 EYSQ5T1H1 3165 aa0.97□□□□□ -2.25
MDM2-230ENST00000543323 PSMG4Q5JS54 123 aa0.97□□□□□ -2.25
MDM2-230ENST00000543323 COL6A3P12111 3177 aa0.97□□□□□ -2.25
MDM2-230ENST00000543323 PRUNE2Q8WUY3 3088 aa0.97□□□□□ -2.25
MDM2-230ENST00000543323 VCANP13611 3396 aa0.96□□□□□ -2.26
MDM2-230ENST00000543323 TRBV6-1A0A0K0K1D8 114 aa0.96□□□□□ -2.26
MDM2-230ENST00000543323 C7orf77A4D0Y5 90 aa0.96□□□□□ -2.26
MDM2-230ENST00000543323 TRANK1O15050 2925 aa0.96□□□□□ -2.26
MDM2-230ENST00000543323 A0A0C4DFX4 3053 aa0.96□□□□□ -2.26
MDM2-230ENST00000543323 CHD9Q3L8U1 2897 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 TNCP24821 2201 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 CD52P31358 61 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 LINC01600Q96MT4 127 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 TP53AIP1Q9HCN2 124 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 PIEZO1Q92508 2521 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 C5orf42Q9H799 3197 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 CHD7Q9P2D1 2997 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 REV3LO60673 3130 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 SPTBN4Q9H254 2564 aa0.95□□□□□ -2.26
MDM2-230ENST00000543323 TSC2P49815 1807 aa0.94□□□□□ -2.26
MDM2-230ENST00000543323 XIRP2A4UGR9 3374 aa0.94□□□□□ -2.26
MDM2-230ENST00000543323 WDR87Q6ZQQ6 2873 aa0.94□□□□□ -2.26
MDM2-230ENST00000543323 UQCRHLA0A096LP55 91 aa0.94□□□□□ -2.26
MDM2-230ENST00000543323 PRO3102Q9H379 93 aa0.94□□□□□ -2.26
MDM2-230ENST00000543323 Q9H521 79 aa0.94□□□□□ -2.26
MDM2-230ENST00000543323 Q9Y3F1 56 aa0.94□□□□□ -2.26
MDM2-230ENST00000543323 SPTBN2O15020 2390 aa0.94□□□□□ -2.26
MDM2-230ENST00000543323 SPTBN5Q9NRC6 3674 aaKnown RBP0.94□□□□□ -2.26
MDM2-230ENST00000543323 CACNA1AO00555 2505 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 CEP295Q9C0D2 2601 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 RIF1Q5UIP0 2472 aaKnown RBP0.93□□□□□ -2.26
MDM2-230ENST00000543323 MUC3AQ02505 3323 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 CHD8Q9HCK8 2581 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 GVINP1Q7Z2Y8 2422 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 AHCTF1Q8WYP5 2266 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 A0A087WVE0 104 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 I3L2K1 104 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 FDCSPQ8NFU4 85 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 TRIOO75962 3097 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 FAM186AA6NE01 2351 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 EP300Q09472 2414 aaPredicted RBP0.93□□□□□ -2.26
MDM2-230ENST00000543323 CEP250Q9BV73 2442 aa0.93□□□□□ -2.26
MDM2-230ENST00000543323 NCOR2Q9Y618 2525 aa0.92□□□□□ -2.26
MDM2-230ENST00000543323 WDFY4Q6ZS81 3184 aa0.92□□□□□ -2.26
MDM2-230ENST00000543323 IGF2RP11717 2491 aa0.92□□□□□ -2.26
MDM2-230ENST00000543323 MAP1BP46821 2468 aaKnown RBP0.92□□□□□ -2.26
MDM2-230ENST00000543323 PTPRZ1P23471 2315 aaPredicted RBP0.92□□□□□ -2.26
MDM2-230ENST00000543323 LCN9Q8WX39 176 aa0.92□□□□□ -2.26
MDM2-230ENST00000543323 V9GYS6 101 aa0.92□□□□□ -2.26
MDM2-230ENST00000543323 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
MDM2-230ENST00000543323 ACACBO00763 2458 aa0.92□□□□□ -2.26
MDM2-230ENST00000543323 EPG5Q9HCE0 2579 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms