RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 DEFB114Q30KQ6 69 aa5.46□□□□□ -1.54
CPSF7-216ENST00000536548 LINC00167Q96N53 147 aa5.46□□□□□ -1.54
CPSF7-216ENST00000536548 UPK3BQ9BT76 320 aa5.46□□□□□ -1.54
CPSF7-216ENST00000536548 C16orf95Q9H693 158 aa5.46□□□□□ -1.54
CPSF7-216ENST00000536548 A0A087WZ39 114 aa5.45□□□□□ -1.54
CPSF7-216ENST00000536548 PRM2P04554 102 aa5.45□□□□□ -1.54
CPSF7-216ENST00000536548 C1orf158Q8N1D5 194 aa5.45□□□□□ -1.54
CPSF7-216ENST00000536548 LINC01561Q8N1V8 128 aa5.45□□□□□ -1.54
CPSF7-216ENST00000536548 DPH3Q96FX2 82 aa5.45□□□□□ -1.54
CPSF7-216ENST00000536548 XCL2Q9UBD3 114 aa5.45□□□□□ -1.54
CPSF7-216ENST00000536548 DNAH10Q8IVF4 4471 aa5.44□□□□□ -1.54
CPSF7-216ENST00000536548 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
CPSF7-216ENST00000536548 C16orf74Q96GX8 76 aa5.44□□□□□ -1.54
CPSF7-216ENST00000536548 H3BQ85 93 aa5.43□□□□□ -1.54
CPSF7-216ENST00000536548 NCR3O14931 201 aa5.43□□□□□ -1.54
CPSF7-216ENST00000536548 Q6ZTI0 123 aa5.43□□□□□ -1.54
CPSF7-216ENST00000536548 UBL5Q9BZL1 73 aa5.43□□□□□ -1.54
CPSF7-216ENST00000536548 ALMS1Q8TCU4 4167 aa5.42□□□□□ -1.54
CPSF7-216ENST00000536548 TRGV2A0A075B6R0 118 aa5.42□□□□□ -1.54
CPSF7-216ENST00000536548 IGHV3OR16-9A0A0B4J2B5 98 aa5.42□□□□□ -1.54
CPSF7-216ENST00000536548 GHRHP01286 108 aa5.42□□□□□ -1.54
CPSF7-216ENST00000536548 DEFB136Q30KP8 78 aa5.42□□□□□ -1.54
CPSF7-216ENST00000536548 ODF3L2Q3SX64 289 aa5.42□□□□□ -1.54
CPSF7-216ENST00000536548 C6orf226Q5I0X4 101 aa5.42□□□□□ -1.54
CPSF7-216ENST00000536548 LYPD5Q6UWN5 251 aa5.42□□□□□ -1.54
CPSF7-216ENST00000536548 KMT2AQ03164 3969 aa5.42□□□□□ -1.54
CPSF7-216ENST00000536548 HERC1Q15751 4861 aa5.41□□□□□ -1.54
CPSF7-216ENST00000536548 A0A087WVE0 104 aa5.41□□□□□ -1.54
CPSF7-216ENST00000536548 TRBV6-8A0A0A6YYG3 113 aa5.41□□□□□ -1.54
CPSF7-216ENST00000536548 TRGV4A0A0C4DH28 118 aa5.41□□□□□ -1.54
CPSF7-216ENST00000536548 PFN2P35080 140 aa5.41□□□□□ -1.54
CPSF7-216ENST00000536548 SS18Q15532 418 aa5.41□□□□□ -1.54
CPSF7-216ENST00000536548 KHDC1LQ5JSQ8 128 aa5.41□□□□□ -1.54
CPSF7-216ENST00000536548 C9orf129Q5T035 196 aaKnown RBP5.41□□□□□ -1.54
CPSF7-216ENST00000536548 Q8IZM0 81 aa5.41□□□□□ -1.54
CPSF7-216ENST00000536548 WFDC9Q8NEX5 89 aa5.41□□□□□ -1.54
CPSF7-216ENST00000536548 COX17Q14061 63 aa5.4□□□□□ -1.54
CPSF7-216ENST00000536548 Q8N814 137 aa5.4□□□□□ -1.54
CPSF7-216ENST00000536548 NOP10Q9NPE3 64 aaKnown RBP5.4□□□□□ -1.54
CPSF7-216ENST00000536548 TRAV7A0A075B6U4 112 aa5.39□□□□□ -1.55
CPSF7-216ENST00000536548 IGKV3OR2-268A0A0C4DH90 116 aa5.39□□□□□ -1.55
CPSF7-216ENST00000536548 FAM236DA0A1B0GTK5 79 aa5.39□□□□□ -1.55
CPSF7-216ENST00000536548 LINC00959A0A1B0GUT2 108 aa5.39□□□□□ -1.55
CPSF7-216ENST00000536548 SLPIP03973 132 aa5.39□□□□□ -1.55
CPSF7-216ENST00000536548 FAM236CP0DP71 79 aa5.39□□□□□ -1.55
CPSF7-216ENST00000536548 PDE6GP18545 87 aa5.39□□□□□ -1.55
CPSF7-216ENST00000536548 EGFEM1PQ0D2K5 195 aa5.39□□□□□ -1.55
CPSF7-216ENST00000536548 C18orf65Q6ZTR6 163 aa5.39□□□□□ -1.55
CPSF7-216ENST00000536548 IGLV4-60A0A075B6I1 120 aa5.38□□□□□ -1.55
CPSF7-216ENST00000536548 KIR2DL5BQ8NHK3 375 aa5.38□□□□□ -1.55
CPSF7-216ENST00000536548 DSCR8Q96T75 97 aa5.38□□□□□ -1.55
CPSF7-216ENST00000536548 CYSTM1Q9H1C7 97 aa5.38□□□□□ -1.55
CPSF7-216ENST00000536548 SERP1Q9Y6X1 66 aa5.38□□□□□ -1.55
CPSF7-216ENST00000536548 TRAV23DV6A0A075B6W5 121 aa5.37□□□□□ -1.55
CPSF7-216ENST00000536548 LOC110117498A0A087WWA1 95 aa5.37□□□□□ -1.55
CPSF7-216ENST00000536548 A0A1B0GUV1 79 aa5.37□□□□□ -1.55
CPSF7-216ENST00000536548 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
CPSF7-216ENST00000536548 ENHOQ6UWT2 76 aa5.37□□□□□ -1.55
CPSF7-216ENST00000536548 LOC100131303A0A0U1RQF7 123 aa5.36□□□□□ -1.55
CPSF7-216ENST00000536548 XCL1P47992 114 aa5.36□□□□□ -1.55
CPSF7-216ENST00000536548 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-216ENST00000536548 RBM3P98179 157 aaKnown RBP5.36□□□□□ -1.55
CPSF7-216ENST00000536548 FHL2Q14192 279 aa5.36□□□□□ -1.55
CPSF7-216ENST00000536548 C6orf223Q8N319 242 aa5.36□□□□□ -1.55
CPSF7-216ENST00000536548 VPS13DQ5THJ4 4388 aa5.36□□□□□ -1.55
CPSF7-216ENST00000536548 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
CPSF7-216ENST00000536548 PKHD1P08F94 4074 aa5.35□□□□□ -1.55
CPSF7-216ENST00000536548 NACAE9PAV3 2078 aa5.35□□□□□ -1.55
CPSF7-216ENST00000536548 PLAC8L1A1L4L8 177 aa5.35□□□□□ -1.55
CPSF7-216ENST00000536548 NDUFC1O43677 76 aa5.35□□□□□ -1.55
CPSF7-216ENST00000536548 LINC00575Q6W349 94 aa5.35□□□□□ -1.55
CPSF7-216ENST00000536548 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
CPSF7-216ENST00000536548 C20orf197Q8N268 126 aa5.35□□□□□ -1.55
CPSF7-216ENST00000536548 IGHV4-28A0A0C4DH34 117 aa5.34□□□□□ -1.55
CPSF7-216ENST00000536548 CCL24O00175 119 aa5.34□□□□□ -1.55
CPSF7-216ENST00000536548 OXTP01178 125 aa5.34□□□□□ -1.55
CPSF7-216ENST00000536548 NANOS2P60321 138 aaKnown RBP5.34□□□□□ -1.55
CPSF7-216ENST00000536548 CXCL6P80162 114 aa5.34□□□□□ -1.55
CPSF7-216ENST00000536548 Q5XG85 94 aa5.34□□□□□ -1.55
CPSF7-216ENST00000536548 Q6ZQT0 140 aa5.34□□□□□ -1.55
CPSF7-216ENST00000536548 LINC00482Q8N8I6 264 aa5.34□□□□□ -1.55
CPSF7-216ENST00000536548 C11orf68Q9H3H3 251 aaKnown RBP5.34□□□□□ -1.55
CPSF7-216ENST00000536548 EPM2AB3EWF7 344 aa5.33□□□□□ -1.56
CPSF7-216ENST00000536548 KLKP1Q107X0 134 aa5.33□□□□□ -1.56
CPSF7-216ENST00000536548 C6orf99Q4VX62 202 aa5.33□□□□□ -1.56
CPSF7-216ENST00000536548 CD164L2Q6UWJ8 174 aa5.33□□□□□ -1.56
CPSF7-216ENST00000536548 LAMTOR3Q9UHA4 124 aa5.33□□□□□ -1.56
CPSF7-216ENST00000536548 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
CPSF7-216ENST00000536548 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
CPSF7-216ENST00000536548 C9orf66Q5T8R8 295 aa5.32□□□□□ -1.56
CPSF7-216ENST00000536548 HRCT1Q6UXD1 115 aa5.32□□□□□ -1.56
CPSF7-216ENST00000536548 GIG44P09565 113 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-216ENST00000536548 GYPEP15421 78 aa5.31□□□□□ -1.56
CPSF7-216ENST00000536548 RPL35AP18077 110 aaKnown RBP5.31□□□□□ -1.56
CPSF7-216ENST00000536548 LINC01547P58512 204 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-216ENST00000536548 Q6ZVQ6 151 aa5.31□□□□□ -1.56
CPSF7-216ENST00000536548 LINC00612Q8N6U2 182 aa5.31□□□□□ -1.56
CPSF7-216ENST00000536548 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
CPSF7-216ENST00000536548 H7BZZ5 65 aa5.3□□□□□ -1.56
CPSF7-216ENST00000536548 HAMPP81172 84 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms