RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 PLXNB2O15031 1838 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 LOC110117498A0A087WWA1 95 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 TRGV1A0A0A0MS02 117 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 NDUFA4O00483 81 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 IGKV4-1P06312 121 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 ARL14EPLP0DKL9 152 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 FXYD6P3P58550 94 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 SPACA4Q8TDM5 124 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 LCE3DQ9BYE3 92 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 C4BP0C0L5 1744 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 TRGV2A0A075B6R0 118 aa1.45□□□□□ -2.18
PABPC1-211ENST00000519596 H0YGX0 51 aa1.45□□□□□ -2.18
PABPC1-211ENST00000519596 INE1O15225 51 aa1.45□□□□□ -2.18
PABPC1-211ENST00000519596 SPINK4O60575 86 aa1.45□□□□□ -2.18
PABPC1-211ENST00000519596 ACYP2P14621 99 aa1.45□□□□□ -2.18
PABPC1-211ENST00000519596 COA5Q86WW8 74 aa1.45□□□□□ -2.18
PABPC1-211ENST00000519596 Q96NJ1 140 aa1.45□□□□□ -2.18
PABPC1-211ENST00000519596 LINC00472Q9H8W2 130 aa1.45□□□□□ -2.18
PABPC1-211ENST00000519596 TIMM8BQ9Y5J9 83 aaPredicted RBP1.45□□□□□ -2.18
PABPC1-211ENST00000519596 COL4A2P08572 1712 aa1.45□□□□□ -2.18
PABPC1-211ENST00000519596 ZFHX3Q15911 3703 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 IGKV2D-24A0A075B6R9 120 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 A0A1B0GU69 56 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 H3BRN7 92 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 M0R2N4 97 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 NCR3O14931 201 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 IGLV6-57P01721 117 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 COX7BP24311 80 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 FXYD4P59646 89 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 RPL38P63173 70 aaKnown RBP1.44□□□□□ -2.18
PABPC1-211ENST00000519596 Q8N9L7 120 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 TMEM167BQ9NRX6 74 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 SDK1Q7Z5N4 2213 aa1.44□□□□□ -2.18
PABPC1-211ENST00000519596 KMT2BQ9UMN6 2715 aaPredicted RBP1.43□□□□□ -2.18
PABPC1-211ENST00000519596 BRWD1Q9NSI6 2320 aa1.43□□□□□ -2.18
PABPC1-211ENST00000519596 LINC00959A0A1B0GUT2 108 aa1.43□□□□□ -2.18
PABPC1-211ENST00000519596 ETDCA0A1B0GVM5 59 aa1.43□□□□□ -2.18
PABPC1-211ENST00000519596 LINC00315P59091 139 aa1.43□□□□□ -2.18
PABPC1-211ENST00000519596 LINC00304Q8N9R0 145 aa1.43□□□□□ -2.18
PABPC1-211ENST00000519596 KCNQ1DNQ9H478 68 aa1.43□□□□□ -2.18
PABPC1-211ENST00000519596 ALPK2Q86TB3 2170 aa1.42□□□□□ -2.18
PABPC1-211ENST00000519596 NDUFA3O95167 84 aa1.42□□□□□ -2.18
PABPC1-211ENST00000519596 HAMPP81172 84 aa1.42□□□□□ -2.18
PABPC1-211ENST00000519596 TNCP24821 2201 aa1.42□□□□□ -2.18
PABPC1-211ENST00000519596 SEC16AO15027 2179 aa1.41□□□□□ -2.18
PABPC1-211ENST00000519596 TRIOBPQ9H2D6 2365 aa1.41□□□□□ -2.18
PABPC1-211ENST00000519596 ZFHX2Q9C0A1 2572 aaPredicted RBP1.41□□□□□ -2.18
PABPC1-211ENST00000519596 MRPL33O75394 65 aaKnown RBP1.41□□□□□ -2.18
PABPC1-211ENST00000519596 FREM1Q5H8C1 2179 aa1.4□□□□□ -2.19
PABPC1-211ENST00000519596 IGKV2-28A0A075B6P5 120 aa1.4□□□□□ -2.19
PABPC1-211ENST00000519596 PIN1P1O15428 100 aa1.4□□□□□ -2.19
PABPC1-211ENST00000519596 IGKV2D-28P01615 120 aa1.4□□□□□ -2.19
PABPC1-211ENST00000519596 C10orf99Q6UWK7 81 aa1.4□□□□□ -2.19
PABPC1-211ENST00000519596 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.4□□□□□ -2.19
PABPC1-211ENST00000519596 Q6ZQY7 126 aa1.4□□□□□ -2.19
PABPC1-211ENST00000519596 CACNA1CQ13936 2221 aa1.4□□□□□ -2.19
PABPC1-211ENST00000519596 RTTNQ86VV8 2226 aa1.39□□□□□ -2.19
PABPC1-211ENST00000519596 DEFB131BA0A096LNP1 70 aa1.39□□□□□ -2.19
PABPC1-211ENST00000519596 IGKV2-24A0A0C4DH68 120 aa1.39□□□□□ -2.19
PABPC1-211ENST00000519596 CPSF4LA6NMK7 179 aaKnown RBP1.39□□□□□ -2.19
PABPC1-211ENST00000519596 SMIM11BQ8TCY0 68 aa1.39□□□□□ -2.19
PABPC1-211ENST00000519596 CCL19Q99731 98 aa1.39□□□□□ -2.19
PABPC1-211ENST00000519596 MED13LQ71F56 2210 aa1.39□□□□□ -2.19
PABPC1-211ENST00000519596 LY6G6CO95867 125 aa1.38□□□□□ -2.19
PABPC1-211ENST00000519596 PRR9Q5T870 116 aa1.38□□□□□ -2.19
PABPC1-211ENST00000519596 Q6ZRX8 168 aa1.38□□□□□ -2.19
PABPC1-211ENST00000519596 SSBP3-AS1Q7Z2R9 100 aa1.37□□□□□ -2.19
PABPC1-211ENST00000519596 PLAC4Q8WY50 150 aa1.37□□□□□ -2.19
PABPC1-211ENST00000519596 GOLGA4Q13439 2230 aaKnown RBP1.36□□□□□ -2.19
PABPC1-211ENST00000519596 TNRC6CQ9HCJ0 1690 aaKnown RBP1.36□□□□□ -2.19
PABPC1-211ENST00000519596 A0A096LNT2 108 aa1.36□□□□□ -2.19
PABPC1-211ENST00000519596 GVQW2A0A096LPI5 108 aaPredicted RBP1.36□□□□□ -2.19
PABPC1-211ENST00000519596 SPTY2D1-AS1A0A0U1RR47 76 aa1.36□□□□□ -2.19
PABPC1-211ENST00000519596 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
PABPC1-211ENST00000519596 KRTAP13-2Q52LG2 175 aa1.36□□□□□ -2.19
PABPC1-211ENST00000519596 SMIM2Q9BVW6 85 aa1.36□□□□□ -2.19
PABPC1-211ENST00000519596 F5P12259 2224 aa1.36□□□□□ -2.19
PABPC1-211ENST00000519596 G3V318 75 aa1.35□□□□□ -2.19
PABPC1-211ENST00000519596 ANGP03950 147 aaKnown RBP1.35□□□□□ -2.19
PABPC1-211ENST00000519596 FN1P02751 2386 aaKnown RBP1.35□□□□□ -2.19
PABPC1-211ENST00000519596 LINC00158P58513 81 aa1.34□□□□□ -2.19
PABPC1-211ENST00000519596 SPINK13Q1W4C9 94 aa1.34□□□□□ -2.19
PABPC1-211ENST00000519596 Q6ZRN7 208 aaPredicted RBP1.34□□□□□ -2.19
PABPC1-211ENST00000519596 GPR179Q6PRD1 2367 aa1.34□□□□□ -2.2
PABPC1-211ENST00000519596 CRIP1P50238 77 aa1.33□□□□□ -2.2
PABPC1-211ENST00000519596 KRTAP10-10P60014 251 aa1.33□□□□□ -2.2
PABPC1-211ENST00000519596 TFF3Q07654 80 aa1.33□□□□□ -2.2
PABPC1-211ENST00000519596 Q8IZM0 81 aa1.33□□□□□ -2.2
PABPC1-211ENST00000519596 LINC00308Q8TCZ7 52 aa1.33□□□□□ -2.2
PABPC1-211ENST00000519596 CNFNQ9BYD5 112 aa1.33□□□□□ -2.2
PABPC1-211ENST00000519596 SSC5DA1L4H1 1573 aa1.33□□□□□ -2.2
PABPC1-211ENST00000519596 NDUFA1O15239 70 aa1.32□□□□□ -2.2
PABPC1-211ENST00000519596 IGFL1Q6UW32 110 aa1.32□□□□□ -2.2
PABPC1-211ENST00000519596 LINC00575Q6W349 94 aa1.32□□□□□ -2.2
PABPC1-211ENST00000519596 CDKN2A-AS1Q9UH64 79 aa1.32□□□□□ -2.2
PABPC1-211ENST00000519596 SHANK1Q9Y566 2161 aa1.32□□□□□ -2.2
PABPC1-211ENST00000519596 URB1O60287 2271 aaKnown RBP1.31□□□□□ -2.2
PABPC1-211ENST00000519596 IAPPP10997 89 aa1.31□□□□□ -2.2
PABPC1-211ENST00000519596 CRIPTQ9P021 101 aa1.31□□□□□ -2.2
PABPC1-211ENST00000519596 TECTAO75443 2155 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms