RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 MINOS1-NBL1R4GNA1 71 aa5.01□□□□□ -1.61
CPNE4-208ENST00000511604 IGHV4-31P0DP07 118 aa5.01□□□□□ -1.61
CPNE4-208ENST00000511604 LCE6AA0A183 80 aa5□□□□□ -1.61
CPNE4-208ENST00000511604 LCA10Q71F78 164 aa5□□□□□ -1.61
CPNE4-208ENST00000511604 A8MTW9 85 aa4.99□□□□□ -1.61
CPNE4-208ENST00000511604 IGHV4-38-2P0DP08 117 aa4.99□□□□□ -1.61
CPNE4-208ENST00000511604 ZCCHC13Q8WW36 166 aaKnown RBP4.99□□□□□ -1.61
CPNE4-208ENST00000511604 FAM30AQ9NZY2 134 aa4.99□□□□□ -1.61
CPNE4-208ENST00000511604 A0A1W2PPR1 153 aa4.98□□□□□ -1.61
CPNE4-208ENST00000511604 PRR4Q16378 134 aa4.98□□□□□ -1.61
CPNE4-208ENST00000511604 Q6ZQY7 126 aa4.98□□□□□ -1.61
CPNE4-208ENST00000511604 LINC00612Q8N6U2 182 aa4.98□□□□□ -1.61
CPNE4-208ENST00000511604 CELA1Q9UNI1 258 aa4.98□□□□□ -1.61
CPNE4-208ENST00000511604 IGLV4-60A0A075B6I1 120 aa4.98□□□□□ -1.61
CPNE4-208ENST00000511604 LIMD2Q9BT23 127 aa4.98□□□□□ -1.61
CPNE4-208ENST00000511604 IGHV3OR16-9A0A0B4J2B5 98 aa4.97□□□□□ -1.61
CPNE4-208ENST00000511604 PRB2P02812 416 aaPredicted RBP4.97□□□□□ -1.61
CPNE4-208ENST00000511604 NOTCH3Q9UM47 2321 aa4.97□□□□□ -1.61
CPNE4-208ENST00000511604 SMIM29Q86T20 159 aa4.97□□□□□ -1.61
CPNE4-208ENST00000511604 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
CPNE4-208ENST00000511604 TENM4Q6N022 2769 aa4.97□□□□□ -1.61
CPNE4-208ENST00000511604 H3BQ85 93 aa4.96□□□□□ -1.61
CPNE4-208ENST00000511604 Q8NDZ9 215 aa4.96□□□□□ -1.61
CPNE4-208ENST00000511604 PRR15LQ9BU68 103 aa4.96□□□□□ -1.61
CPNE4-208ENST00000511604 TLN1Q9Y490 2541 aaKnown RBP4.96□□□□□ -1.62
CPNE4-208ENST00000511604 HECTD1Q9ULT8 2610 aa4.96□□□□□ -1.62
CPNE4-208ENST00000511604 LMO4P61968 165 aa4.96□□□□□ -1.62
CPNE4-208ENST00000511604 PRR26Q8N8Z3 221 aa4.96□□□□□ -1.62
CPNE4-208ENST00000511604 LOC100131303A0A0U1RQF7 123 aa4.95□□□□□ -1.62
CPNE4-208ENST00000511604 A6NED7 52 aa4.95□□□□□ -1.62
CPNE4-208ENST00000511604 C10orf25Q5T742 122 aa4.95□□□□□ -1.62
CPNE4-208ENST00000511604 NKAPP1Q8N9T2 125 aa4.95□□□□□ -1.62
CPNE4-208ENST00000511604 USP9XQ93008 2570 aaPredicted RBP4.95□□□□□ -1.62
CPNE4-208ENST00000511604 CELSR2Q9HCU4 2923 aa4.95□□□□□ -1.62
CPNE4-208ENST00000511604 COX7BP24311 80 aa4.95□□□□□ -1.62
CPNE4-208ENST00000511604 C11orf71Q6IPW1 123 aa4.95□□□□□ -1.62
CPNE4-208ENST00000511604 USMG5Q96IX5 58 aa4.95□□□□□ -1.62
CPNE4-208ENST00000511604 MYO9AB2RTY4 2548 aa4.94□□□□□ -1.62
CPNE4-208ENST00000511604 Q75L30 129 aa4.94□□□□□ -1.62
CPNE4-208ENST00000511604 ANKRD17O75179 2603 aaKnown RBP4.94□□□□□ -1.62
CPNE4-208ENST00000511604 ABCA2Q9BZC7 2435 aa4.94□□□□□ -1.62
CPNE4-208ENST00000511604 DEFB131AP59861 70 aa4.94□□□□□ -1.62
CPNE4-208ENST00000511604 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
CPNE4-208ENST00000511604 PTPN13Q12923 2485 aa4.94□□□□□ -1.62
CPNE4-208ENST00000511604 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.93□□□□□ -1.62
CPNE4-208ENST00000511604 TRGV2A0A075B6R0 118 aa4.93□□□□□ -1.62
CPNE4-208ENST00000511604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.93□□□□□ -1.62
CPNE4-208ENST00000511604 H3BUX3 64 aa4.93□□□□□ -1.62
CPNE4-208ENST00000511604 IGLV1-40P01703 118 aa4.93□□□□□ -1.62
CPNE4-208ENST00000511604 DEFB114Q30KQ6 69 aa4.93□□□□□ -1.62
CPNE4-208ENST00000511604 C18orf65Q6ZTR6 163 aa4.92□□□□□ -1.62
CPNE4-208ENST00000511604 NDUFB1O75438 58 aa4.92□□□□□ -1.62
CPNE4-208ENST00000511604 MOBPQ13875 183 aa4.92□□□□□ -1.62
CPNE4-208ENST00000511604 B9D2Q9BPU9 175 aa4.92□□□□□ -1.62
CPNE4-208ENST00000511604 CSPG4Q6UVK1 2322 aa4.92□□□□□ -1.62
CPNE4-208ENST00000511604 NIPBLQ6KC79 2804 aaeCLIP4.91□□□□□ -1.62
CPNE4-208ENST00000511604 ETDCA0A1B0GVM5 59 aa4.91□□□□□ -1.62
CPNE4-208ENST00000511604 C9orf116Q5BN46 136 aaPredicted RBP4.91□□□□□ -1.62
CPNE4-208ENST00000511604 MDFIQ99750 246 aa4.91□□□□□ -1.62
CPNE4-208ENST00000511604 CR1P17927 2039 aa4.91□□□□□ -1.62
CPNE4-208ENST00000511604 LOC101927531A0A1B0GV80 90 aa4.91□□□□□ -1.62
CPNE4-208ENST00000511604 ELOF1P60002 83 aaKnown RBP4.91□□□□□ -1.62
CPNE4-208ENST00000511604 Q8IZM0 81 aa4.91□□□□□ -1.62
CPNE4-208ENST00000511604 KLK12Q9UKR0 248 aa4.91□□□□□ -1.62
CPNE4-208ENST00000511604 TRGV1A0A0A0MS02 117 aa4.9□□□□□ -1.62
CPNE4-208ENST00000511604 H3BUA1 57 aa4.9□□□□□ -1.62
CPNE4-208ENST00000511604 DEFB136Q30KP8 78 aa4.9□□□□□ -1.62
CPNE4-208ENST00000511604 KHDC1LQ5JSQ8 128 aa4.9□□□□□ -1.63
CPNE4-208ENST00000511604 ST20-AS1Q8NBB2 130 aa4.9□□□□□ -1.63
CPNE4-208ENST00000511604 LINC00208Q96KT6 92 aa4.9□□□□□ -1.63
CPNE4-208ENST00000511604 WNK1Q9H4A3 2382 aa4.9□□□□□ -1.63
CPNE4-208ENST00000511604 HIGD2BQ4VC39 106 aa4.89□□□□□ -1.63
CPNE4-208ENST00000511604 COX17Q14061 63 aa4.89□□□□□ -1.63
CPNE4-208ENST00000511604 LCE2DQ5TA82 110 aaPredicted RBP4.89□□□□□ -1.63
CPNE4-208ENST00000511604 CLPSL2Q6UWE3 100 aa4.89□□□□□ -1.63
CPNE4-208ENST00000511604 IGHV4-30-2A0A087WSY4 118 aa4.88□□□□□ -1.63
CPNE4-208ENST00000511604 A6NDX4 124 aa4.88□□□□□ -1.63
CPNE4-208ENST00000511604 C3orf84H3BNL1 204 aa4.88□□□□□ -1.63
CPNE4-208ENST00000511604 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
CPNE4-208ENST00000511604 Q9BRP9 147 aa4.88□□□□□ -1.63
CPNE4-208ENST00000511604 UBR5O95071 2799 aaPredicted RBP4.88□□□□□ -1.63
CPNE4-208ENST00000511604 CFAP46Q8IYW2 2715 aa4.88□□□□□ -1.63
CPNE4-208ENST00000511604 IGLV6-57P01721 117 aa4.88□□□□□ -1.63
CPNE4-208ENST00000511604 IGHV4-30-4P0DP06 118 aa4.88□□□□□ -1.63
CPNE4-208ENST00000511604 TEP1Q99973 2627 aaKnown RBP4.88□□□□□ -1.63
CPNE4-208ENST00000511604 TRGV4A0A0C4DH28 118 aa4.87□□□□□ -1.63
CPNE4-208ENST00000511604 LINC00959A0A1B0GUT2 108 aa4.87□□□□□ -1.63
CPNE4-208ENST00000511604 SLURP1P55000 103 aa4.87□□□□□ -1.63
CPNE4-208ENST00000511604 LINC00313P59037 77 aa4.87□□□□□ -1.63
CPNE4-208ENST00000511604 SPG11Q96JI7 2443 aa4.87□□□□□ -1.63
CPNE4-208ENST00000511604 ZANQ9Y493 2812 aa4.86□□□□□ -1.63
CPNE4-208ENST00000511604 VPREB1P12018 145 aa4.86□□□□□ -1.63
CPNE4-208ENST00000511604 FBN2P35556 2912 aa4.86□□□□□ -1.63
CPNE4-208ENST00000511604 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
CPNE4-208ENST00000511604 JMJD1CQ15652 2540 aa4.85□□□□□ -1.63
CPNE4-208ENST00000511604 CCL24O00175 119 aa4.85□□□□□ -1.63
CPNE4-208ENST00000511604 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
CPNE4-208ENST00000511604 TEX15Q9BXT5 2789 aa4.85□□□□□ -1.63
CPNE4-208ENST00000511604 IGHV4-59P01825 116 aa4.85□□□□□ -1.63
CPNE4-208ENST00000511604 NOP10Q9NPE3 64 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms