RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 COX8AP10176 69 aa1.42□□□□□ -2.18
ITGB1-208ENST00000464001 FMN2Q9NZ56 1722 aa1.42□□□□□ -2.18
ITGB1-208ENST00000464001 ZFHX3Q15911 3703 aa1.42□□□□□ -2.18
ITGB1-208ENST00000464001 K7EIL1 84 aa1.41□□□□□ -2.18
ITGB1-208ENST00000464001 ERCC6L2Q5T890 1561 aa1.41□□□□□ -2.18
ITGB1-208ENST00000464001 TENM1Q9UKZ4 2725 aa1.41□□□□□ -2.18
ITGB1-208ENST00000464001 ITSN2Q9NZM3 1697 aa1.41□□□□□ -2.18
ITGB1-208ENST00000464001 SLIT1O75093 1534 aa1.4□□□□□ -2.18
ITGB1-208ENST00000464001 PLXNC1O60486 1568 aa1.4□□□□□ -2.19
ITGB1-208ENST00000464001 GLI2P10070 1586 aa1.4□□□□□ -2.19
ITGB1-208ENST00000464001 DIP2AQ14689 1571 aa1.4□□□□□ -2.19
ITGB1-208ENST00000464001 A0A1B0GU69 56 aa1.4□□□□□ -2.19
ITGB1-208ENST00000464001 DEFB119Q8N690 84 aa1.4□□□□□ -2.19
ITGB1-208ENST00000464001 TRAV21A0A0B4J279 112 aa1.39□□□□□ -2.19
ITGB1-208ENST00000464001 IFI6P09912 130 aa1.39□□□□□ -2.19
ITGB1-208ENST00000464001 DEFB112Q30KQ8 113 aa1.39□□□□□ -2.19
ITGB1-208ENST00000464001 SSBP3-AS1Q7Z2R9 100 aa1.39□□□□□ -2.19
ITGB1-208ENST00000464001 LRRC37AA6NMS7 1700 aa1.39□□□□□ -2.19
ITGB1-208ENST00000464001 ALS2Q96Q42 1657 aa1.39□□□□□ -2.19
ITGB1-208ENST00000464001 PIN1P1O15428 100 aa1.38□□□□□ -2.19
ITGB1-208ENST00000464001 SFTA3P0C7M3 94 aa1.38□□□□□ -2.19
ITGB1-208ENST00000464001 LINC00959A0A1B0GUT2 108 aa1.37□□□□□ -2.19
ITGB1-208ENST00000464001 C3orf79P0CE67 100 aa1.37□□□□□ -2.19
ITGB1-208ENST00000464001 HMGA1P17096 107 aaKnown RBP1.37□□□□□ -2.19
ITGB1-208ENST00000464001 UBE2DNLQ8IWF7 75 aa1.37□□□□□ -2.19
ITGB1-208ENST00000464001 WFDC9Q8NEX5 89 aa1.37□□□□□ -2.19
ITGB1-208ENST00000464001 NAV3Q8IVL0 2385 aa1.37□□□□□ -2.19
ITGB1-208ENST00000464001 URB1O60287 2271 aaKnown RBP1.37□□□□□ -2.19
ITGB1-208ENST00000464001 ROS1P08922 2347 aa1.37□□□□□ -2.19
ITGB1-208ENST00000464001 RP1L1Q8IWN7 2480 aaPredicted RBP1.37□□□□□ -2.19
ITGB1-208ENST00000464001 COL6A6A6NMZ7 2263 aa1.36□□□□□ -2.19
ITGB1-208ENST00000464001 FXYD6-FXYD2A0A087WZ82 144 aa1.36□□□□□ -2.19
ITGB1-208ENST00000464001 TJP1Q07157 1748 aa1.36□□□□□ -2.19
ITGB1-208ENST00000464001 GNG13Q9P2W3 67 aa1.36□□□□□ -2.19
ITGB1-208ENST00000464001 RALGAPBQ86X10 1494 aa1.36□□□□□ -2.19
ITGB1-208ENST00000464001 AHCTF1Q8WYP5 2266 aa1.36□□□□□ -2.19
ITGB1-208ENST00000464001 CROCC2H7BZ55 1655 aa1.35□□□□□ -2.19
ITGB1-208ENST00000464001 TULP4Q9NRJ4 1543 aa1.35□□□□□ -2.19
ITGB1-208ENST00000464001 NREPQ16612 68 aa1.35□□□□□ -2.19
ITGB1-208ENST00000464001 GAFA1Q96PS6 74 aa1.35□□□□□ -2.19
ITGB1-208ENST00000464001 ABCA10Q8WWZ4 1543 aa1.35□□□□□ -2.19
ITGB1-208ENST00000464001 DDX60LQ5H9U9 1706 aaKnown RBP1.35□□□□□ -2.19
ITGB1-208ENST00000464001 EEA1Q15075 1411 aa1.34□□□□□ -2.19
ITGB1-208ENST00000464001 NDUFB1O75438 58 aa1.34□□□□□ -2.19
ITGB1-208ENST00000464001 Q6ZSA8 131 aa1.34□□□□□ -2.19
ITGB1-208ENST00000464001 ATXN8Q156A1 80 aa1.33□□□□□ -2.2
ITGB1-208ENST00000464001 RNF17Q9BXT8 1623 aaKnown RBP1.33□□□□□ -2.2
ITGB1-208ENST00000464001 ANKRD50Q9ULJ7 1429 aa1.32□□□□□ -2.2
ITGB1-208ENST00000464001 LY75O60449 1722 aa1.32□□□□□ -2.2
ITGB1-208ENST00000464001 PRXQ9BXM0 1461 aa1.31□□□□□ -2.2
ITGB1-208ENST00000464001 NWD1Q149M9 1564 aa1.31□□□□□ -2.2
ITGB1-208ENST00000464001 COX7BP24311 80 aa1.31□□□□□ -2.2
ITGB1-208ENST00000464001 FXYD6P3P58550 94 aa1.31□□□□□ -2.2
ITGB1-208ENST00000464001 A0A1B0GUL6 1792 aa1.3□□□□□ -2.2
ITGB1-208ENST00000464001 ANKRD36CQ5JPF3 1778 aa1.3□□□□□ -2.2
ITGB1-208ENST00000464001 LCE6AA0A183 80 aa1.3□□□□□ -2.2
ITGB1-208ENST00000464001 C10orf95Q9H7T3 257 aa1.29□□□□□ -2.2
ITGB1-208ENST00000464001 JMJD1CQ15652 2540 aa1.29□□□□□ -2.2
ITGB1-208ENST00000464001 MAST1Q9Y2H9 1570 aa1.29□□□□□ -2.2
ITGB1-208ENST00000464001 DOPEY2Q9Y3R5 2298 aa1.28□□□□□ -2.2
ITGB1-208ENST00000464001 ANGP03950 147 aaKnown RBP1.28□□□□□ -2.2
ITGB1-208ENST00000464001 SMIM5Q71RC9 77 aa1.28□□□□□ -2.2
ITGB1-208ENST00000464001 FAM103A1Q9BTL3 118 aaKnown RBP1.28□□□□□ -2.2
ITGB1-208ENST00000464001 ABCC6O95255 1503 aa1.28□□□□□ -2.2
ITGB1-208ENST00000464001 TNRC6CQ9HCJ0 1690 aaKnown RBP1.28□□□□□ -2.2
ITGB1-208ENST00000464001 ANKRD17O75179 2603 aaKnown RBP1.28□□□□□ -2.2
ITGB1-208ENST00000464001 PLCE1Q9P212 2302 aa1.27□□□□□ -2.21
ITGB1-208ENST00000464001 I3L2K1 104 aa1.27□□□□□ -2.21
ITGB1-208ENST00000464001 CRIPTQ9P021 101 aa1.27□□□□□ -2.21
ITGB1-208ENST00000464001 GOLGA4Q13439 2230 aaKnown RBP1.27□□□□□ -2.21
ITGB1-208ENST00000464001 C3P01024 1663 aa1.26□□□□□ -2.21
ITGB1-208ENST00000464001 SYCP2Q9BX26 1530 aa1.26□□□□□ -2.21
ITGB1-208ENST00000464001 FAM208BQ5VWN6 2430 aa1.26□□□□□ -2.21
ITGB1-208ENST00000464001 A0A0D9SFI3 127 aa1.26□□□□□ -2.21
ITGB1-208ENST00000464001 LINC01549A6NIU2 74 aa1.26□□□□□ -2.21
ITGB1-208ENST00000464001 SPINK9Q5DT21 86 aa1.26□□□□□ -2.21
ITGB1-208ENST00000464001 TP53AIP1Q9HCN2 124 aa1.26□□□□□ -2.21
ITGB1-208ENST00000464001 NDUFA4O00483 81 aa1.25□□□□□ -2.21
ITGB1-208ENST00000464001 KRTAP10-4P60372 401 aaPredicted RBP1.25□□□□□ -2.21
ITGB1-208ENST00000464001 ENHOQ6UWT2 76 aa1.25□□□□□ -2.21
ITGB1-208ENST00000464001 TNCP24821 2201 aa1.25□□□□□ -2.21
ITGB1-208ENST00000464001 A0A0D9SG42 100 aa1.24□□□□□ -2.21
ITGB1-208ENST00000464001 UGGT1Q9NYU2 1555 aa1.24□□□□□ -2.21
ITGB1-208ENST00000464001 SPTY2D1-AS1A0A0U1RR47 76 aa1.23□□□□□ -2.21
ITGB1-208ENST00000464001 CPSF4LA6NMK7 179 aaKnown RBP1.23□□□□□ -2.21
ITGB1-208ENST00000464001 ARL14EPLP0DKL9 152 aa1.23□□□□□ -2.21
ITGB1-208ENST00000464001 KRTAP21-3Q3LHN1 58 aa1.23□□□□□ -2.21
ITGB1-208ENST00000464001 C4AP0C0L4 1744 aa1.22□□□□□ -2.21
ITGB1-208ENST00000464001 C4BP0C0L5 1744 aa1.22□□□□□ -2.21
ITGB1-208ENST00000464001 CPS1P31327 1500 aa1.21□□□□□ -2.22
ITGB1-208ENST00000464001 K7EQZ3 153 aa1.21□□□□□ -2.22
ITGB1-208ENST00000464001 DEFB123Q8N688 67 aa1.21□□□□□ -2.22
ITGB1-208ENST00000464001 CNFNQ9BYD5 112 aa1.21□□□□□ -2.22
ITGB1-208ENST00000464001 PRO0255Q9UI72 69 aa1.21□□□□□ -2.22
ITGB1-208ENST00000464001 TOGARAM1Q9Y4F4 1720 aa1.2□□□□□ -2.22
ITGB1-208ENST00000464001 CLASP1Q7Z460 1538 aa1.2□□□□□ -2.22
ITGB1-208ENST00000464001 BIVM-ERCC5R4GMW8 1640 aa1.2□□□□□ -2.22
ITGB1-208ENST00000464001 RPL38P63173 70 aaKnown RBP1.2□□□□□ -2.22
ITGB1-208ENST00000464001 PIGYQ3MUY2 71 aa1.2□□□□□ -2.22
ITGB1-208ENST00000464001 USF3Q68DE3 2245 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms