RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SCXQ7RTU7 201 aa6.57□□□□□ -1.36
SNHG3-201ENST00000413987 KLK5Q9Y337 293 aaPredicted RBP6.57□□□□□ -1.36
SNHG3-201ENST00000413987 Q6ZRP5 223 aa6.56□□□□□ -1.36
SNHG3-201ENST00000413987 TRAV12-3A0A0B4J271 114 aa6.56□□□□□ -1.36
SNHG3-201ENST00000413987 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
SNHG3-201ENST00000413987 hADV29S1A0JD25 119 aa6.55□□□□□ -1.36
SNHG3-201ENST00000413987 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
SNHG3-201ENST00000413987 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
SNHG3-201ENST00000413987 CSNK1G2-AS1Q8NCQ2 148 aa6.55□□□□□ -1.36
SNHG3-201ENST00000413987 PRM2P04554 102 aa6.54□□□□□ -1.36
SNHG3-201ENST00000413987 SND1-IT1Q9HBX3 110 aa6.54□□□□□ -1.36
SNHG3-201ENST00000413987 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
SNHG3-201ENST00000413987 DSCR8Q96T75 97 aa6.54□□□□□ -1.36
SNHG3-201ENST00000413987 LINC00588Q9Y4M8 146 aa6.54□□□□□ -1.36
SNHG3-201ENST00000413987 Q6JHZ5 121 aa6.53□□□□□ -1.36
SNHG3-201ENST00000413987 MUC4Q99102 2169 aa6.53□□□□□ -1.36
SNHG3-201ENST00000413987 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
SNHG3-201ENST00000413987 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
SNHG3-201ENST00000413987 DNAL4O96015 105 aa6.52□□□□□ -1.37
SNHG3-201ENST00000413987 DYNLRB2Q8TF09 96 aa6.52□□□□□ -1.37
SNHG3-201ENST00000413987 UBE2D4Q9Y2X8 147 aa6.52□□□□□ -1.37
SNHG3-201ENST00000413987 NOTCH1P46531 2555 aa6.51□□□□□ -1.37
SNHG3-201ENST00000413987 IGKV3-20P01619 116 aa6.51□□□□□ -1.37
SNHG3-201ENST00000413987 CXCL6P80162 114 aa6.51□□□□□ -1.37
SNHG3-201ENST00000413987 OCR1Q9BZK8 76 aa6.51□□□□□ -1.37
SNHG3-201ENST00000413987 DEFB114Q30KQ6 69 aa6.5□□□□□ -1.37
SNHG3-201ENST00000413987 UPK3BQ9BT76 320 aa6.5□□□□□ -1.37
SNHG3-201ENST00000413987 C22orf24Q9Y442 160 aa6.5□□□□□ -1.37
SNHG3-201ENST00000413987 NBEAL1Q6ZS30 2694 aa6.5□□□□□ -1.37
SNHG3-201ENST00000413987 TRAV13-2A0A0B4J235 113 aa6.5□□□□□ -1.37
SNHG3-201ENST00000413987 CHCHD7Q9BUK0 85 aa6.5□□□□□ -1.37
SNHG3-201ENST00000413987 WFDC10AQ9H1F0 79 aa6.5□□□□□ -1.37
SNHG3-201ENST00000413987 IGLV5-39A0A0G2JS06 123 aa6.49□□□□□ -1.37
SNHG3-201ENST00000413987 RPL28P46779 137 aaKnown RBP6.49□□□□□ -1.37
SNHG3-201ENST00000413987 EGFEM1PQ0D2K5 195 aa6.49□□□□□ -1.37
SNHG3-201ENST00000413987 C7orf65Q6ZTY9 151 aa6.49□□□□□ -1.37
SNHG3-201ENST00000413987 CDKN2A-AS1Q9UH64 79 aa6.49□□□□□ -1.37
SNHG3-201ENST00000413987 RNASE13Q5GAN3 156 aaKnown RBP6.49□□□□□ -1.37
SNHG3-201ENST00000413987 DEFB131AP59861 70 aa6.48□□□□□ -1.37
SNHG3-201ENST00000413987 PRR4Q16378 134 aa6.48□□□□□ -1.37
SNHG3-201ENST00000413987 S100A7L2Q5SY68 101 aa6.48□□□□□ -1.37
SNHG3-201ENST00000413987 C10orf25Q5T742 122 aa6.48□□□□□ -1.37
SNHG3-201ENST00000413987 FP248Q71RG6 208 aaPredicted RBP6.48□□□□□ -1.37
SNHG3-201ENST00000413987 DIRC1Q969H9 104 aa6.48□□□□□ -1.37
SNHG3-201ENST00000413987 KRTAP16-1A8MUX0 517 aa6.47□□□□□ -1.37
SNHG3-201ENST00000413987 H0YGX0 51 aa6.47□□□□□ -1.37
SNHG3-201ENST00000413987 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
SNHG3-201ENST00000413987 DNHD1Q96M86 4753 aa6.47□□□□□ -1.37
SNHG3-201ENST00000413987 SOSTDC1Q6X4U4 206 aa6.46□□□□□ -1.37
SNHG3-201ENST00000413987 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.37
SNHG3-201ENST00000413987 WWC2-AS2Q96NR7 200 aa6.46□□□□□ -1.37
SNHG3-201ENST00000413987 MGAM2Q2M2H8 2515 aa6.46□□□□□ -1.38
SNHG3-201ENST00000413987 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.46□□□□□ -1.38
SNHG3-201ENST00000413987 IGKV2-29A2NJV5 120 aaPredicted RBP6.46□□□□□ -1.38
SNHG3-201ENST00000413987 CRPP02741 224 aa6.46□□□□□ -1.38
SNHG3-201ENST00000413987 IGKV3D-7A0A0C4DH55 119 aa6.45□□□□□ -1.38
SNHG3-201ENST00000413987 IGLV1-51P01701 117 aa6.45□□□□□ -1.38
SNHG3-201ENST00000413987 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
SNHG3-201ENST00000413987 LINC00467Q9BRT7 94 aa6.45□□□□□ -1.38
SNHG3-201ENST00000413987 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
SNHG3-201ENST00000413987 SS18Q15532 418 aa6.45□□□□□ -1.38
SNHG3-201ENST00000413987 SPINK13Q1W4C9 94 aa6.45□□□□□ -1.38
SNHG3-201ENST00000413987 ZNF625Q96I27 306 aaPredicted RBP6.45□□□□□ -1.38
SNHG3-201ENST00000413987 C14orf132Q9NPU4 83 aa6.44□□□□□ -1.38
SNHG3-201ENST00000413987 LINC00846Q9NV44 126 aa6.44□□□□□ -1.38
SNHG3-201ENST00000413987 IGHV3-73A0A0B4J1V6 119 aa6.44□□□□□ -1.38
SNHG3-201ENST00000413987 SMIM1B2RUZ4 78 aa6.44□□□□□ -1.38
SNHG3-201ENST00000413987 CELA1Q9UNI1 258 aa6.44□□□□□ -1.38
SNHG3-201ENST00000413987 COX6A2Q02221 97 aa6.43□□□□□ -1.38
SNHG3-201ENST00000413987 C9orf66Q5T8R8 295 aa6.43□□□□□ -1.38
SNHG3-201ENST00000413987 RMI2Q96E14 147 aa6.43□□□□□ -1.38
SNHG3-201ENST00000413987 A0A1B0GW54 56 aa6.42□□□□□ -1.38
SNHG3-201ENST00000413987 BCE1O60756 84 aa6.42□□□□□ -1.38
SNHG3-201ENST00000413987 IGHV3-53P01767 116 aa6.42□□□□□ -1.38
SNHG3-201ENST00000413987 DNAH3Q8TD57 4116 aa6.42□□□□□ -1.38
SNHG3-201ENST00000413987 KRTAP4-16G5E9R7 235 aaPredicted RBP6.41□□□□□ -1.38
SNHG3-201ENST00000413987 A0A087WVE0 104 aa6.41□□□□□ -1.38
SNHG3-201ENST00000413987 TRBV10-3A0A0K0K1G6 114 aa6.41□□□□□ -1.38
SNHG3-201ENST00000413987 CCKP06307 115 aa6.41□□□□□ -1.38
SNHG3-201ENST00000413987 HTN1P15515 57 aa6.41□□□□□ -1.38
SNHG3-201ENST00000413987 CASC10Q5T4H9 136 aa6.41□□□□□ -1.38
SNHG3-201ENST00000413987 A0A087WYN8 130 aa6.4□□□□□ -1.39
SNHG3-201ENST00000413987 JMJD7-PLA2G4BH0Y9G9 81 aa6.4□□□□□ -1.39
SNHG3-201ENST00000413987 UBE2AP49459 152 aa6.4□□□□□ -1.39
SNHG3-201ENST00000413987 FHL2Q14192 279 aa6.4□□□□□ -1.39
SNHG3-201ENST00000413987 SMIM11BQ8TCY0 68 aa6.4□□□□□ -1.39
SNHG3-201ENST00000413987 FUSP35637 526 aaKnown RBP eCLIP6.39□□□□□ -1.39
SNHG3-201ENST00000413987 ORMDL1Q9P0S3 153 aa6.39□□□□□ -1.39
SNHG3-201ENST00000413987 WFDC9Q8NEX5 89 aa6.38□□□□□ -1.39
SNHG3-201ENST00000413987 DHRS4-AS1Q9P1J3 65 aa6.38□□□□□ -1.39
SNHG3-201ENST00000413987 PRB2P02812 416 aaPredicted RBP6.38□□□□□ -1.39
SNHG3-201ENST00000413987 KRTAP10-11P60412 298 aa6.38□□□□□ -1.39
SNHG3-201ENST00000413987 LYPD5Q6UWN5 251 aa6.38□□□□□ -1.39
SNHG3-201ENST00000413987 IGKV2-28A0A075B6P5 120 aa6.37□□□□□ -1.39
SNHG3-201ENST00000413987 LECT2O14960 151 aa6.37□□□□□ -1.39
SNHG3-201ENST00000413987 IGKV2D-28P01615 120 aa6.37□□□□□ -1.39
SNHG3-201ENST00000413987 C9orf129Q5T035 196 aaKnown RBP6.37□□□□□ -1.39
SNHG3-201ENST00000413987 MIR7-3HGQ8N6C7 128 aa6.37□□□□□ -1.39
SNHG3-201ENST00000413987 A8MTW9 85 aa6.37□□□□□ -1.39
SNHG3-201ENST00000413987 NCR3O14931 201 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms