RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 FREM1Q5H8C1 2179 aa2.4□□□□□ -2.03
LRRC39-203ENST00000370138 IGLV4-69A0A075B6H9 119 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 DEFB108AA8MXU0 73 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 CCL3L1P16619 93 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 HAMPP81172 84 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 HCP5Q6MZN7 132 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 GAFA1Q96PS6 74 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 CHD9Q3L8U1 2897 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 UTRNP46939 3433 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 IGKV3-7A0A075B6H7 116 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 NDUFA4O00483 81 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 SPINK7P58062 85 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 RPL39P5Q59GN2 51 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 SPATA8Q6RVD6 105 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 TYMSOSQ8TAI1 123 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 SMIM2Q9BVW6 85 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 CHD7Q9P2D1 2997 aa2.39□□□□□ -2.03
LRRC39-203ENST00000370138 BRWD1Q9NSI6 2320 aa2.38□□□□□ -2.03
LRRC39-203ENST00000370138 COL27A1Q8IZC6 1860 aaPredicted RBP2.38□□□□□ -2.03
LRRC39-203ENST00000370138 CNTRLQ7Z7A1 2325 aa2.38□□□□□ -2.03
LRRC39-203ENST00000370138 USF3Q68DE3 2245 aa2.38□□□□□ -2.03
LRRC39-203ENST00000370138 SPRR4Q96PI1 79 aa2.38□□□□□ -2.03
LRRC39-203ENST00000370138 TRGV4A0A0C4DH28 118 aa2.37□□□□□ -2.03
LRRC39-203ENST00000370138 NDPQ00604 133 aa2.37□□□□□ -2.03
LRRC39-203ENST00000370138 DEFB112Q30KQ8 113 aa2.37□□□□□ -2.03
LRRC39-203ENST00000370138 Q5W150 140 aa2.37□□□□□ -2.03
LRRC39-203ENST00000370138 KRTAP11-1Q8IUC1 163 aa2.37□□□□□ -2.03
LRRC39-203ENST00000370138 LEAP2Q969E1 77 aa2.37□□□□□ -2.03
LRRC39-203ENST00000370138 BRCA2P51587 3418 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 CACNA1DQ01668 2161 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 CACNA1EQ15878 2313 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 A0A1B0GU33 70 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 ETDCA0A1B0GVM5 59 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 NCR3O14931 201 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 PRCDQ00LT1 54 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 RNF5Q99942 180 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 KCNQ1DNQ9H478 68 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 TRANK1O15050 2925 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 SDK1Q7Z5N4 2213 aa2.36□□□□□ -2.03
LRRC39-203ENST00000370138 TNCP24821 2201 aa2.35□□□□□ -2.03
LRRC39-203ENST00000370138 PRR14LQ5THK1 2151 aa2.35□□□□□ -2.03
LRRC39-203ENST00000370138 C9orf163Q8N9P6 203 aa2.35□□□□□ -2.03
LRRC39-203ENST00000370138 C4orf3Q8WVX3 66 aa2.35□□□□□ -2.03
LRRC39-203ENST00000370138 KLK12Q9UKR0 248 aa2.35□□□□□ -2.03
LRRC39-203ENST00000370138 CUL9Q8IWT3 2517 aa2.35□□□□□ -2.03
LRRC39-203ENST00000370138 C5orf42Q9H799 3197 aa2.34□□□□□ -2.03
LRRC39-203ENST00000370138 TRGV2A0A075B6R0 118 aa2.34□□□□□ -2.03
LRRC39-203ENST00000370138 IGKV4-1P06312 121 aa2.34□□□□□ -2.03
LRRC39-203ENST00000370138 RNASE3P12724 160 aaKnown RBP2.34□□□□□ -2.03
LRRC39-203ENST00000370138 COX17Q14061 63 aa2.34□□□□□ -2.03
LRRC39-203ENST00000370138 C10orf55Q5SWW7 151 aa2.34□□□□□ -2.03
LRRC39-203ENST00000370138 COA5Q86WW8 74 aa2.34□□□□□ -2.03
LRRC39-203ENST00000370138 LINC00308Q8TCZ7 52 aa2.34□□□□□ -2.03
LRRC39-203ENST00000370138 A0A0C4DFX4 3053 aa2.34□□□□□ -2.03
LRRC39-203ENST00000370138 IGKV3OR2-268A0A0C4DH90 116 aa2.33□□□□□ -2.04
LRRC39-203ENST00000370138 NDUFA1O15239 70 aa2.33□□□□□ -2.04
LRRC39-203ENST00000370138 ZNF861PO60384 105 aa2.33□□□□□ -2.04
LRRC39-203ENST00000370138 C9orf129Q5T035 196 aaKnown RBP2.33□□□□□ -2.04
LRRC39-203ENST00000370138 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
LRRC39-203ENST00000370138 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
LRRC39-203ENST00000370138 CACNA1AO00555 2505 aa2.33□□□□□ -2.04
LRRC39-203ENST00000370138 UNC79Q9P2D8 2635 aa2.33□□□□□ -2.04
LRRC39-203ENST00000370138 IGKV2-29A2NJV5 120 aaPredicted RBP2.33□□□□□ -2.04
LRRC39-203ENST00000370138 DEFB108BQ8NET1 73 aa2.33□□□□□ -2.04
LRRC39-203ENST00000370138 LINC00959A0A1B0GUT2 108 aa2.32□□□□□ -2.04
LRRC39-203ENST00000370138 WT1-ASQ06250 92 aa2.32□□□□□ -2.04
LRRC39-203ENST00000370138 ST20-AS1Q8NBB2 130 aa2.32□□□□□ -2.04
LRRC39-203ENST00000370138 TMEM167AQ8TBQ9 72 aa2.32□□□□□ -2.04
LRRC39-203ENST00000370138 NAV3Q8IVL0 2385 aa2.31□□□□□ -2.04
LRRC39-203ENST00000370138 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
LRRC39-203ENST00000370138 GIG44P09565 113 aaPredicted RBP2.31□□□□□ -2.04
LRRC39-203ENST00000370138 KRTAP10-1P60331 282 aa2.31□□□□□ -2.04
LRRC39-203ENST00000370138 DEFB116Q30KQ4 102 aa2.31□□□□□ -2.04
LRRC39-203ENST00000370138 SPINT4Q6UDR6 99 aa2.31□□□□□ -2.04
LRRC39-203ENST00000370138 CEP290O15078 2479 aa2.31□□□□□ -2.04
LRRC39-203ENST00000370138 REV3LO60673 3130 aa2.31□□□□□ -2.04
LRRC39-203ENST00000370138 ABCA4P78363 2273 aa2.31□□□□□ -2.04
LRRC39-203ENST00000370138 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
LRRC39-203ENST00000370138 H3BRN7 92 aa2.3□□□□□ -2.04
LRRC39-203ENST00000370138 APELAP0DMC3 54 aa2.3□□□□□ -2.04
LRRC39-203ENST00000370138 COX7BP24311 80 aa2.3□□□□□ -2.04
LRRC39-203ENST00000370138 Q6ZTI0 123 aa2.3□□□□□ -2.04
LRRC39-203ENST00000370138 TECTAO75443 2155 aa2.3□□□□□ -2.04
LRRC39-203ENST00000370138 MKI67P46013 3256 aaKnown RBP2.3□□□□□ -2.04
LRRC39-203ENST00000370138 CACNA1GO43497 2377 aa2.29□□□□□ -2.04
LRRC39-203ENST00000370138 IGKV2-40A0A087WW87 121 aaPredicted RBP2.29□□□□□ -2.04
LRRC39-203ENST00000370138 IGKV2D-40P01614 121 aaPredicted RBP2.29□□□□□ -2.04
LRRC39-203ENST00000370138 PRB3Q04118 309 aaPredicted RBP2.29□□□□□ -2.04
LRRC39-203ENST00000370138 KNTC1P50748 2209 aa2.28□□□□□ -2.04
LRRC39-203ENST00000370138 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.28□□□□□ -2.04
LRRC39-203ENST00000370138 A0A087WTM6 91 aa2.28□□□□□ -2.04
LRRC39-203ENST00000370138 TRGV1A0A0A0MS02 117 aa2.28□□□□□ -2.04
LRRC39-203ENST00000370138 TRBV6-4A0A1B0GX49 114 aa2.28□□□□□ -2.04
LRRC39-203ENST00000370138 CRIP1P50238 77 aa2.28□□□□□ -2.04
LRRC39-203ENST00000370138 FAM186AA6NE01 2351 aa2.28□□□□□ -2.04
LRRC39-203ENST00000370138 LAMA2P24043 3122 aaKnown RBP2.28□□□□□ -2.04
LRRC39-203ENST00000370138 KMT2BQ9UMN6 2715 aaPredicted RBP2.28□□□□□ -2.04
LRRC39-203ENST00000370138 AHCTF1Q8WYP5 2266 aa2.28□□□□□ -2.04
LRRC39-203ENST00000370138 A0A1B0GU69 56 aa2.27□□□□□ -2.05
LRRC39-203ENST00000370138 FAM168BA1KXE4 195 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms