RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Igkv4-54A0A0G2JES9 117 aa12.49□□□□□ -0.41
Chd3-201ENSMUST00000092971 Plxnb2B2RXS4 1842 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Igkv4-63A0A0G2JFU6 117 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 4930596D02RikQ3V0H9 216 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Igfbpl1Q80W15 270 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Ighv1-7A0A075B5T7 117 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Ighv1-34A0A075B5V2 117 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 AgerQ62151 402 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Ahctf1Q8CJF7 2243 aaKnown RBP12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Trav9d-1A0A075B699 112 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Gm28038F7BCN9 126 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Tpsab1Q02844 273 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Tmem86bQ497J1 226 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Q80X32 188 aaKnown RBP12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Gm9747Q810H1 104 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Msrb3Q8BU85 253 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Lamb1P02469 1786 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 P01723 117 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Cr2P19070 1025 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 SNORCQ9CXL7 121 aa12.48□□□□□ -0.41
Chd3-201ENSMUST00000092971 Tmem141A2AJB2 108 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 5730522E02RikQ5SP45 163 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 SlaQ60898 281 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 Morn2Q6UL01 79 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 Znf146Q8BQN6 292 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 Gm26938S4R185 226 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 Ypel2Q65Z95 119 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 Slc25a39Q9D8K8 359 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 Ypel1Q9ESC7 118 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 Ly86O88188 162 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 CtsgP28293 261 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 Gm5105Q8C6Y9 112 aa12.47□□□□□ -0.41
Chd3-201ENSMUST00000092971 Gm12169F2Z474 250 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Eif4ebp2P70445 120 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Olfr211Q8VGH2 309 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Reg1P43137 165 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Chchd5Q9CQP3 110 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Zfp407G3UVV3 2246 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Trav6-5A0A075B6B5 112 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Myod1P10085 318 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Gpx1P11352 201 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Sec11aQ9R0P6 179 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Cacna1gQ5SUF7 2381 aa12.46□□□□□ -0.41
Chd3-201ENSMUST00000092971 Trav4-2A0A075B638 110 aa12.46□□□□□ -0.42
Chd3-201ENSMUST00000092971 Trav6d-5A0A075B6B9 112 aa12.46□□□□□ -0.42
Chd3-201ENSMUST00000092971 Tm2d3Q8BJ83 261 aa12.46□□□□□ -0.42
Chd3-201ENSMUST00000092971 Tnks1bp1P58871 1720 aa12.46□□□□□ -0.42
Chd3-201ENSMUST00000092971 Gm42517A0A1Y7VLQ2 374 aa12.46□□□□□ -0.42
Chd3-201ENSMUST00000092971 CrebbpP45481 2441 aa12.46□□□□□ -0.42
Chd3-201ENSMUST00000092971 Defa21Q8C1P2 93 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 Pfn2Q9JJV2 140 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 Gm15128A2ADW8 449 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 Rnf217D3YYI7 515 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 H2-DMb1P35737 261 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 EtdQ80SW5 59 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 Ube2cQ9D1C1 179 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 Cd200r1Q9ES57 326 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 Ighv5-12-4A0A0A6YWG4 117 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 Gatd1Q8BFQ8 220 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 Spaca3Q9D9X8 221 aa12.45□□□□□ -0.42
Chd3-201ENSMUST00000092971 Zfp420Q7TMN8 578 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Mrpl27Q99N92 148 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Ndufa3Q9CQ91 84 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Shisa9Q9CZN4 424 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Nhsl1Q8CAF4 1587 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 B1ARW8 110 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Gm4744D3Z3S5 154 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Lgals6O54891 301 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Ccl3P10855 92 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Igkv3-1A0A075B5P1 119 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Gm21976J3QNN2 249 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Neurog3P70661 214 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Cd33Q63994 403 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Tomm40Q9QYA2 361 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Psg25Q497W1 475 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Srsf7Q8BL97 267 aaKnown RBP12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Lgals4Q8K419 326 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Cbln3Q9JHG0 197 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Cd5lQ9QWK4 352 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Rpl36aP83882 106 aaKnown RBP12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Ttc9cQ810A3 171 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 Znf22Q9ERU3 237 aa12.44□□□□□ -0.42
Chd3-201ENSMUST00000092971 C4bP01029 1738 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Igkv13-85A0A075B666 115 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Csrp3P50462 194 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 9330161L09RikQ9D253 136 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Col11a2Q64739 1736 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Igkv4-69A0A0B4J1I6 116 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Prp2P05143 317 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 PigyP0C1P0 71 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Ss18l1Q8BW22 402 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Trdv1A0A075B657 112 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Tmem92B7ZWI3 162 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Olfr1373Q7TQT6 311 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Rnf183Q8QZS5 190 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Frem3Q5H8B9 2123 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Ube2d2bQ6ZWY6 147 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Mrpl55Q9CZ83 127 aa12.43□□□□□ -0.42
Chd3-201ENSMUST00000092971 Igkv4-78A0A0A6YYE5 119 aa12.42□□□□□ -0.42
Chd3-201ENSMUST00000092971 Igkv4-58A0A0G2JGI6 119 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms