RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	KIAA0556	O60303	1618 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	UNC13C	Q8NB66	2214 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	DEFB131B	A0A096LNP1	70 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	TRAV21	A0A0B4J279	112 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	LCE6A	A0A183	80 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	SFTA3	P0C7M3	94 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	SPINK7	P58062	85 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	KRTAP10-1	P60331	282 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	NREP	Q16612	68 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	NCBP2-AS2	Q69YL0	99 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	DEFB123	Q8N688	67 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	LINC00472	Q9H8W2	130 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	SNRNP200	O75643	2136 aa	Known RBP	0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	TNRC6B	Q9UPQ9	1833 aa	Known RBP	0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	DLG5	Q8TDM6	1919 aa		0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	MUC22	E2RYF6	1773 aa	Predicted RBP	0.68	□□□□□ -2.3
MECP2-222	ENST00000637533	PAPPA	Q13219	1627 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	INTS1	Q8N201	2190 aa	Known RBP	0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	IFT172	Q9UG01	1749 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	VWDE	Q8N2E2	1590 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	CASP8AP2	Q9UKL3	1982 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	SNRPGP15	A8MWD9	76 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533		G3V318	75 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533		K7EQZ3	153 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	LCE3C	Q5T5A8	94 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533		Q5VSD8	79 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	CDKN2A-AS1	Q9UH64	79 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	C5	P01031	1676 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	LMTK2	Q8IWU2	1503 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	FREM1	Q5H8C1	2179 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	MROH1	Q8NDA8	1641 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	TRPM7	Q96QT4	1865 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	NUP188	Q5SRE5	1749 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	CRYBG1	Q9Y4K1	1723 aa		0.67	□□□□□ -2.3
MECP2-222	ENST00000637533	ASCC3	Q8N3C0	2202 aa	Known RBP	0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	MAST1	Q9Y2H9	1570 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533		E9PCH4	1651 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	NHS	Q6T4R5	1651 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533		H0YGX0	51 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	NDUFA4	O00483	81 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	PRO0255	Q9UI72	69 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	PIK3C2B	O00750	1634 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	TARBP1	Q13395	1621 aa	Known RBP	0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	USP32	Q8NFA0	1604 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	NCOA6	Q14686	2063 aa	Predicted RBP	0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	ARHGEF5	Q12774	1597 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	DIP2B	Q9P265	1576 aa		0.66	□□□□□ -2.3
MECP2-222	ENST00000637533	COL4A6	Q14031	1691 aa		0.65	□□□□□ -2.3
MECP2-222	ENST00000637533	NUMA1	Q14980	2115 aa		0.65	□□□□□ -2.3
MECP2-222	ENST00000637533	KDM3B	Q7LBC6	1761 aa		0.65	□□□□□ -2.3
MECP2-222	ENST00000637533	LRRC7	Q96NW7	1537 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	TULP4	Q9NRJ4	1543 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	ADCY10	Q96PN6	1610 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	PKD1L3	Q7Z443	1732 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	ETDC	A0A1B0GVM5	59 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	PLN	P26678	52 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	KRTAP10-7	P60409	375 aa	Predicted RBP	0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	KCNQ1DN	Q9H478	68 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	CMC2	Q9NRP2	79 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	TMEM167B	Q9NRX6	74 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	ADAMTS12	P58397	1594 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	DNMBP	Q6XZF7	1577 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	CACNA1B	Q00975	2339 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	LOC285556	D6RIA3	1793 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	GBF1	Q92538	1859 aa		0.65	□□□□□ -2.31
MECP2-222	ENST00000637533	ASXL1	Q8IXJ9	1541 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	SYCP2	Q9BX26	1530 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	CCDC180	Q9P1Z9	1646 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	ITSN1	Q15811	1721 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	MAP2	P11137	1827 aa	Known RBP	0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	TET1	Q8NFU7	2136 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	IFI6	P09912	130 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	CD163L1	Q9NR16	1453 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	PLCH1	Q4KWH8	1693 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	ESPL1	Q14674	2120 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	MYH4	Q9Y623	1939 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	WNK3	Q9BYP7	1800 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	LRP6	O75581	1613 aa		0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	CIC	Q96RK0	1608 aa	Predicted RBP	0.64	□□□□□ -2.31
MECP2-222	ENST00000637533	ABCA4	P78363	2273 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	UBR3	Q6ZT12	1888 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	RGPD2	P0DJD1	1756 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	SDK1	Q7Z5N4	2213 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	KRTAP5-9	P26371	169 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	MYO7B	Q6PIF6	2116 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	MRPL34	Q9BQ48	92 aa	Known RBP	0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	PRO3102	Q9H379	93 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	KNDC1	Q76NI1	1749 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	TMEM131L	A2VDJ0	1609 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	DOCK11	Q5JSL3	2073 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	HIVEP2	P31629	2446 aa		0.63	□□□□□ -2.31
MECP2-222	ENST00000637533	COL4A4	P53420	1690 aa	Predicted RBP	0.62	□□□□□ -2.31
MECP2-222	ENST00000637533	PLXNC1	O60486	1568 aa		0.62	□□□□□ -2.31
MECP2-222	ENST00000637533	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.62	□□□□□ -2.31
MECP2-222	ENST00000637533	FANCD2	Q9BXW9	1451 aa		0.62	□□□□□ -2.31
MECP2-222	ENST00000637533	RGPD1	P0DJD0	1748 aa		0.62	□□□□□ -2.31
MECP2-222	ENST00000637533	MYO5C	Q9NQX4	1742 aa		0.62	□□□□□ -2.31
MECP2-222	ENST00000637533	LINC00959	A0A1B0GUT2	108 aa		0.62	□□□□□ -2.31
MECP2-222	ENST00000637533	LYNX1	G3V0Z9	82 aa		0.62	□□□□□ -2.31
MECP2-222	ENST00000637533		H3BUA1	57 aa		0.62	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms