RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
LRRC39-204ENST00000620882 ASXL3Q9C0F0 2248 aa1.79□□□□□ -2.12
LRRC39-204ENST00000620882 TIAM2Q8IVF5 1701 aa1.78□□□□□ -2.12
LRRC39-204ENST00000620882 IGKV2-40A0A087WW87 121 aaPredicted RBP1.78□□□□□ -2.12
LRRC39-204ENST00000620882 TRBV7-4A0A0J9YYF1 115 aa1.78□□□□□ -2.12
LRRC39-204ENST00000620882 IGKV2D-40P01614 121 aaPredicted RBP1.78□□□□□ -2.12
LRRC39-204ENST00000620882 HMGA1P17096 107 aaKnown RBP1.78□□□□□ -2.12
LRRC39-204ENST00000620882 LINC00472Q9H8W2 130 aa1.78□□□□□ -2.12
LRRC39-204ENST00000620882 COL14A1Q05707 1796 aaKnown RBP1.78□□□□□ -2.12
LRRC39-204ENST00000620882 NUP188Q5SRE5 1749 aa1.78□□□□□ -2.12
LRRC39-204ENST00000620882 RNF17Q9BXT8 1623 aaKnown RBP1.78□□□□□ -2.12
LRRC39-204ENST00000620882 URB2Q14146 1524 aaKnown RBP1.78□□□□□ -2.13
LRRC39-204ENST00000620882 ASCC3Q8N3C0 2202 aaKnown RBP1.78□□□□□ -2.13
LRRC39-204ENST00000620882 TRGV2A0A075B6R0 118 aa1.78□□□□□ -2.13
LRRC39-204ENST00000620882 IGKV4-1P06312 121 aa1.78□□□□□ -2.13
LRRC39-204ENST00000620882 IFI6P09912 130 aa1.78□□□□□ -2.13
LRRC39-204ENST00000620882 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.13
LRRC39-204ENST00000620882 FAM74A4Q5TZK3 123 aa1.78□□□□□ -2.13
LRRC39-204ENST00000620882 DEFB132Q7Z7B7 95 aa1.78□□□□□ -2.13
LRRC39-204ENST00000620882 WFDC6Q9BQY6 131 aa1.78□□□□□ -2.13
LRRC39-204ENST00000620882 PLAC8Q9NZF1 115 aa1.78□□□□□ -2.13
LRRC39-204ENST00000620882 PKD1L3Q7Z443 1732 aa1.78□□□□□ -2.13
LRRC39-204ENST00000620882 HELZ2Q9BYK8 2649 aaKnown RBP1.77□□□□□ -2.13
LRRC39-204ENST00000620882 TRGV1A0A0A0MS02 117 aa1.77□□□□□ -2.13
LRRC39-204ENST00000620882 PIK3C2BO00750 1634 aa1.77□□□□□ -2.13
LRRC39-204ENST00000620882 LAMC1P11047 1609 aa1.77□□□□□ -2.13
LRRC39-204ENST00000620882 MUC2Q02817 5179 aa1.77□□□□□ -2.13
LRRC39-204ENST00000620882 TRAV1-2A0A0B4J238 106 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 SPRR4Q96PI1 79 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 IFT172Q9UG01 1749 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 ZDBF2Q9HCK1 2354 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 NEBP20929 6669 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 FANCD2Q9BXW9 1451 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 LRRC37A3O60309 1634 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 J3QRE1 110 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 IFI27P40305 119 aaPredicted RBP1.76□□□□□ -2.13
LRRC39-204ENST00000620882 Q86TA4 180 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 COA5Q86WW8 74 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 GNG13Q9P2W3 67 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 V9GYV3 84 aa1.76□□□□□ -2.13
LRRC39-204ENST00000620882 SETD2Q9BYW2 2564 aaPredicted RBP1.75□□□□□ -2.13
LRRC39-204ENST00000620882 PLCH1Q4KWH8 1693 aa1.75□□□□□ -2.13
LRRC39-204ENST00000620882 FMN2Q9NZ56 1722 aa1.75□□□□□ -2.13
LRRC39-204ENST00000620882 CTXND1A0A1B0GTU2 59 aa1.75□□□□□ -2.13
LRRC39-204ENST00000620882 LCE3AQ5TA76 89 aa1.75□□□□□ -2.13
LRRC39-204ENST00000620882 BAGE2Q86Y30 109 aa1.75□□□□□ -2.13
LRRC39-204ENST00000620882 R4GMQ9 66 aa1.75□□□□□ -2.13
LRRC39-204ENST00000620882 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
LRRC39-204ENST00000620882 PAPPA2Q9BXP8 1791 aa1.75□□□□□ -2.13
LRRC39-204ENST00000620882 K7EMI3 77 aa1.74□□□□□ -2.13
LRRC39-204ENST00000620882 BAGE3Q86Y29 109 aa1.74□□□□□ -2.13
LRRC39-204ENST00000620882 C4orf3Q8WVX3 66 aa1.74□□□□□ -2.13
LRRC39-204ENST00000620882 ALS2Q96Q42 1657 aa1.74□□□□□ -2.13
LRRC39-204ENST00000620882 BCORQ6W2J9 1755 aa1.74□□□□□ -2.13
LRRC39-204ENST00000620882 LOC110117498A0A087WWA1 95 aa1.74□□□□□ -2.13
LRRC39-204ENST00000620882 FXYD6Q9H0Q3 95 aa1.74□□□□□ -2.13
LRRC39-204ENST00000620882 FBN3Q75N90 2809 aa1.73□□□□□ -2.13
LRRC39-204ENST00000620882 STAB1Q9NY15 2570 aa1.73□□□□□ -2.13
LRRC39-204ENST00000620882 PP632Q6XCG6 107 aa1.73□□□□□ -2.13
LRRC39-204ENST00000620882 LINC00322Q6ZN03 302 aaPredicted RBP1.73□□□□□ -2.13
LRRC39-204ENST00000620882 OBSCN-AS1Q96MR7 158 aa1.73□□□□□ -2.13
LRRC39-204ENST00000620882 TXNDC17Q9BRA2 123 aa1.73□□□□□ -2.13
LRRC39-204ENST00000620882 PTPN13Q12923 2485 aa1.73□□□□□ -2.13
LRRC39-204ENST00000620882 KNTC1P50748 2209 aa1.73□□□□□ -2.13
LRRC39-204ENST00000620882 USP32Q8NFA0 1604 aa1.73□□□□□ -2.13
LRRC39-204ENST00000620882 TMEM14CQ9P0S9 112 aa1.72□□□□□ -2.13
LRRC39-204ENST00000620882 LRRC7Q96NW7 1537 aa1.71□□□□□ -2.14
LRRC39-204ENST00000620882 UQCR11O14957 56 aa1.71□□□□□ -2.14
LRRC39-204ENST00000620882 INE1O15225 51 aa1.71□□□□□ -2.14
LRRC39-204ENST00000620882 ZCCHC13Q8WW36 166 aaKnown RBP1.71□□□□□ -2.14
LRRC39-204ENST00000620882 CCL19Q99731 98 aa1.71□□□□□ -2.14
LRRC39-204ENST00000620882 C5P01031 1676 aa1.71□□□□□ -2.14
LRRC39-204ENST00000620882 NKTRP30414 1462 aaKnown RBP1.71□□□□□ -2.14
LRRC39-204ENST00000620882 ATP7BP35670 1465 aa1.71□□□□□ -2.14
LRRC39-204ENST00000620882 NCOR1O75376 2440 aa1.71□□□□□ -2.14
LRRC39-204ENST00000620882 SMIM5Q71RC9 77 aa1.7□□□□□ -2.14
LRRC39-204ENST00000620882 TECTAO75443 2155 aa1.7□□□□□ -2.14
LRRC39-204ENST00000620882 COL6A5A8TX70 2615 aa1.7□□□□□ -2.14
LRRC39-204ENST00000620882 RICTORQ6R327 1708 aa1.7□□□□□ -2.14
LRRC39-204ENST00000620882 NRAPQ86VF7 1730 aa1.7□□□□□ -2.14
LRRC39-204ENST00000620882 LINC01549A6NIU2 74 aa1.7□□□□□ -2.14
LRRC39-204ENST00000620882 CHD8Q9HCK8 2581 aa1.7□□□□□ -2.14
LRRC39-204ENST00000620882 DOT1LQ8TEK3 1739 aa1.69□□□□□ -2.14
LRRC39-204ENST00000620882 TRAV21A0A0B4J279 112 aa1.69□□□□□ -2.14
LRRC39-204ENST00000620882 LINC00959A0A1B0GUT2 108 aa1.69□□□□□ -2.14
LRRC39-204ENST00000620882 C10orf113Q5VZT2 155 aa1.69□□□□□ -2.14
LRRC39-204ENST00000620882 NCBP2-AS2Q69YL0 99 aa1.69□□□□□ -2.14
LRRC39-204ENST00000620882 SPATA8Q6RVD6 105 aa1.69□□□□□ -2.14
LRRC39-204ENST00000620882 TRANK1O15050 2925 aa1.69□□□□□ -2.14
LRRC39-204ENST00000620882 USP9XQ93008 2570 aaPredicted RBP1.69□□□□□ -2.14
LRRC39-204ENST00000620882 ADGRB2O60241 1585 aa1.69□□□□□ -2.14
LRRC39-204ENST00000620882 MAST4O15021 2626 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 E9PCH4 1651 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 NHSQ6T4R5 1651 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 CFAP43Q8NDM7 1665 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 SORL1Q92673 2214 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 H0Y9P7 68 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 M0R2N4 97 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 MGPP08493 103 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms