RNA–Protein interactions for RNA: ENST00000613314.1

PCDHGA12-202, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA12, Length 2,634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-202ENST00000613314 Q8N3U1 123 aa11.55□□□□□ -0.56
PCDHGA12-202ENST00000613314 TRBV7-4A0A0J9YYF1 115 aa11.54□□□□□ -0.56
PCDHGA12-202ENST00000613314 NOTCH3Q9UM47 2321 aa11.54□□□□□ -0.56
PCDHGA12-202ENST00000613314 C19orf84I3L1E1 186 aa11.54□□□□□ -0.56
PCDHGA12-202ENST00000613314 C6orf99Q4VX62 202 aa11.54□□□□□ -0.56
PCDHGA12-202ENST00000613314 SEC61GP60059 68 aa11.53□□□□□ -0.56
PCDHGA12-202ENST00000613314 ZNF843Q8N446 348 aa11.53□□□□□ -0.56
PCDHGA12-202ENST00000613314 V9GYY9 64 aa11.53□□□□□ -0.56
PCDHGA12-202ENST00000613314 LOC110117498A0A087WWA1 95 aa11.52□□□□□ -0.57
PCDHGA12-202ENST00000613314 SCXQ7RTU7 201 aa11.52□□□□□ -0.57
PCDHGA12-202ENST00000613314 MPLKIPQ8TAP9 179 aa11.52□□□□□ -0.57
PCDHGA12-202ENST00000613314 LAMTOR3Q9UHA4 124 aa11.52□□□□□ -0.57
PCDHGA12-202ENST00000613314 MIFP14174 115 aa11.52□□□□□ -0.57
PCDHGA12-202ENST00000613314 SPATA3Q8NHX4 192 aa11.52□□□□□ -0.57
PCDHGA12-202ENST00000613314 CELSR2Q9HCU4 2923 aa11.51□□□□□ -0.57
PCDHGA12-202ENST00000613314 NDUFC1O43677 76 aa11.51□□□□□ -0.57
PCDHGA12-202ENST00000613314 ZNF561-AS1K7EIQ3 104 aa11.5□□□□□ -0.57
PCDHGA12-202ENST00000613314 NOP10Q9NPE3 64 aaKnown RBP11.49□□□□□ -0.57
PCDHGA12-202ENST00000613314 HIVEP3Q5T1R4 2406 aa11.49□□□□□ -0.57
PCDHGA12-202ENST00000613314 CXCL6P80162 114 aa11.49□□□□□ -0.57
PCDHGA12-202ENST00000613314 LINC00575Q6W349 94 aa11.49□□□□□ -0.57
PCDHGA12-202ENST00000613314 C6orf223Q8N319 242 aa11.49□□□□□ -0.57
PCDHGA12-202ENST00000613314 ATP5EP56381 51 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA12-202ENST00000613314 KHDC1LQ5JSQ8 128 aa11.48□□□□□ -0.57
PCDHGA12-202ENST00000613314 Q8NDZ9 215 aa11.48□□□□□ -0.57
PCDHGA12-202ENST00000613314 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
PCDHGA12-202ENST00000613314 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
PCDHGA12-202ENST00000613314 AKAP9Q99996 3911 aa11.48□□□□□ -0.57
PCDHGA12-202ENST00000613314 NBPF19A0A087WUL8 3843 aa11.47□□□□□ -0.57
PCDHGA12-202ENST00000613314 NREPQ16612 68 aa11.47□□□□□ -0.57
PCDHGA12-202ENST00000613314 TMEM254Q8TBM7 123 aa11.46□□□□□ -0.57
PCDHGA12-202ENST00000613314 TRBV6-8A0A0A6YYG3 113 aa11.45□□□□□ -0.58
PCDHGA12-202ENST00000613314 MSMBP08118 114 aa11.45□□□□□ -0.58
PCDHGA12-202ENST00000613314 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
PCDHGA12-202ENST00000613314 ODF3L2Q3SX64 289 aa11.44□□□□□ -0.58
PCDHGA12-202ENST00000613314 Q8IZM0 81 aa11.44□□□□□ -0.58
PCDHGA12-202ENST00000613314 TRGV2A0A075B6R0 118 aa11.43□□□□□ -0.58
PCDHGA12-202ENST00000613314 IGHV4-30-2A0A087WSY4 118 aa11.43□□□□□ -0.58
PCDHGA12-202ENST00000613314 PRB1P04280 392 aa11.43□□□□□ -0.58
PCDHGA12-202ENST00000613314 C9orf116Q5BN46 136 aaPredicted RBP11.43□□□□□ -0.58
PCDHGA12-202ENST00000613314 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
PCDHGA12-202ENST00000613314 STHQ8IWL8 128 aa11.43□□□□□ -0.58
PCDHGA12-202ENST00000613314 A0A1W2PRX2 142 aa11.41□□□□□ -0.58
PCDHGA12-202ENST00000613314 SPG11Q96JI7 2443 aa11.41□□□□□ -0.58
PCDHGA12-202ENST00000613314 DEFB114Q30KQ6 69 aa11.41□□□□□ -0.58
PCDHGA12-202ENST00000613314 Q6ZQY7 126 aa11.41□□□□□ -0.58
PCDHGA12-202ENST00000613314 C11orf44Q8N8P7 122 aa11.41□□□□□ -0.58
PCDHGA12-202ENST00000613314 MUC7Q8TAX7 377 aa11.41□□□□□ -0.58
PCDHGA12-202ENST00000613314 BPY2O14599 106 aa11.4□□□□□ -0.58
PCDHGA12-202ENST00000613314 C9orf66Q5T8R8 295 aa11.4□□□□□ -0.58
PCDHGA12-202ENST00000613314 TRGV4A0A0C4DH28 118 aa11.4□□□□□ -0.58
PCDHGA12-202ENST00000613314 ZNF702PQ9H963 129 aa11.4□□□□□ -0.58
PCDHGA12-202ENST00000613314 PLA2G2AP14555 144 aa11.39□□□□□ -0.59
PCDHGA12-202ENST00000613314 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
PCDHGA12-202ENST00000613314 Q8N9L7 120 aa11.38□□□□□ -0.59
PCDHGA12-202ENST00000613314 ESRGQ1W209 222 aa11.38□□□□□ -0.59
PCDHGA12-202ENST00000613314 GNLYP22749 145 aa11.37□□□□□ -0.59
PCDHGA12-202ENST00000613314 PRYO14603 147 aa11.37□□□□□ -0.59
PCDHGA12-202ENST00000613314 KIAA0087Q14695 138 aa11.36□□□□□ -0.59
PCDHGA12-202ENST00000613314 BBC3Q96PG8 261 aaPredicted RBP11.36□□□□□ -0.59
PCDHGA12-202ENST00000613314 PDE6GP18545 87 aa11.36□□□□□ -0.59
PCDHGA12-202ENST00000613314 IGF2RP11717 2491 aa11.35□□□□□ -0.59
PCDHGA12-202ENST00000613314 FUSP35637 526 aaKnown RBP eCLIP11.35□□□□□ -0.59
PCDHGA12-202ENST00000613314 ZANQ9Y493 2812 aa11.34□□□□□ -0.59
PCDHGA12-202ENST00000613314 ERC2-IT1O76042 136 aa11.34□□□□□ -0.59
PCDHGA12-202ENST00000613314 Q6ZTC4 211 aa11.34□□□□□ -0.59
PCDHGA12-202ENST00000613314 LINC00269Q8N2A0 174 aa11.34□□□□□ -0.59
PCDHGA12-202ENST00000613314 WNK1Q9H4A3 2382 aa11.34□□□□□ -0.59
PCDHGA12-202ENST00000613314 COX17Q14061 63 aa11.34□□□□□ -0.59
PCDHGA12-202ENST00000613314 SPTBN4Q9H254 2564 aa11.33□□□□□ -0.59
PCDHGA12-202ENST00000613314 CHD6Q8TD26 2715 aa11.33□□□□□ -0.6
PCDHGA12-202ENST00000613314 MXRA5Q9NR99 2828 aa11.33□□□□□ -0.6
PCDHGA12-202ENST00000613314 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
PCDHGA12-202ENST00000613314 CCL19Q99731 98 aa11.32□□□□□ -0.6
PCDHGA12-202ENST00000613314 B4DSR2 109 aa11.31□□□□□ -0.6
PCDHGA12-202ENST00000613314 GIG44P09565 113 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA12-202ENST00000613314 OCR1Q9BZK8 76 aa11.31□□□□□ -0.6
PCDHGA12-202ENST00000613314 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
PCDHGA12-202ENST00000613314 C16orf74Q96GX8 76 aa11.3□□□□□ -0.6
PCDHGA12-202ENST00000613314 HIGD2AQ9BW72 106 aa11.3□□□□□ -0.6
PCDHGA12-202ENST00000613314 LINC01006Q8NI28 216 aa11.29□□□□□ -0.6
PCDHGA12-202ENST00000613314 TLN2Q9Y4G6 2542 aa11.29□□□□□ -0.6
PCDHGA12-202ENST00000613314 MYO9AB2RTY4 2548 aa11.29□□□□□ -0.6
PCDHGA12-202ENST00000613314 IGKV4-1P06312 121 aa11.29□□□□□ -0.6
PCDHGA12-202ENST00000613314 DAD1P61803 113 aa11.29□□□□□ -0.6
PCDHGA12-202ENST00000613314 ITPR1Q14643 2758 aa11.29□□□□□ -0.6
PCDHGA12-202ENST00000613314 IGLV10-54A0A075B6I4 117 aa11.28□□□□□ -0.6
PCDHGA12-202ENST00000613314 IGLV6-57P01721 117 aa11.28□□□□□ -0.6
PCDHGA12-202ENST00000613314 SETXQ7Z333 2677 aaKnown RBP11.27□□□□□ -0.6
PCDHGA12-202ENST00000613314 IGHV4-28A0A0C4DH34 117 aa11.27□□□□□ -0.6
PCDHGA12-202ENST00000613314 IGHV4-31P0DP07 118 aa11.27□□□□□ -0.6
PCDHGA12-202ENST00000613314 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.6
PCDHGA12-202ENST00000613314 LRCOL1A6NCL2 159 aa11.27□□□□□ -0.61
PCDHGA12-202ENST00000613314 WFDC10AQ9H1F0 79 aa11.27□□□□□ -0.61
PCDHGA12-202ENST00000613314 C10orf25Q5T742 122 aa11.26□□□□□ -0.61
PCDHGA12-202ENST00000613314 NIPBLQ6KC79 2804 aaeCLIP11.26□□□□□ -0.61
PCDHGA12-202ENST00000613314 A0A096LPF7 62 aa11.25□□□□□ -0.61
PCDHGA12-202ENST00000613314 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.25□□□□□ -0.61
PCDHGA12-202ENST00000613314 PRR15Q8IV56 129 aa11.25□□□□□ -0.61
PCDHGA12-202ENST00000613314 CR1P17927 2039 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms