RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 TMEM263Q8WUH6 116 aaKnown RBP1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 CCL19Q99731 98 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 FXYD6Q9H0Q3 95 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 LINC00472Q9H8W2 130 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 SHPRHQ149N8 1683 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 PREX1Q8TCU6 1659 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 ANKRD36A6QL64 1941 aa1.69□□□□□ -2.14
TNRC6A-208ENST00000561726 MED13LQ71F56 2210 aa1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 ZNF236Q9UL36 1845 aa1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 SNRPGP15A8MWD9 76 aa1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 NDUFB1O75438 58 aa1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 HMGA1P17096 107 aaKnown RBP1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 C10orf113Q5VZT2 155 aa1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 PIK3C2BO00750 1634 aa1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 CRYBG1Q9Y4K1 1723 aa1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 INTS1Q8N201 2190 aaKnown RBP1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 DIP2AQ14689 1571 aa1.68□□□□□ -2.14
TNRC6A-208ENST00000561726 COL4A1P02462 1669 aa1.67□□□□□ -2.14
TNRC6A-208ENST00000561726 TRAV21A0A0B4J279 112 aa1.67□□□□□ -2.14
TNRC6A-208ENST00000561726 ZCCHC13Q8WW36 166 aaKnown RBP1.67□□□□□ -2.14
TNRC6A-208ENST00000561726 OBSCN-AS1Q96MR7 158 aa1.67□□□□□ -2.14
TNRC6A-208ENST00000561726 PLCH1Q4KWH8 1693 aa1.67□□□□□ -2.14
TNRC6A-208ENST00000561726 NCOA6Q14686 2063 aaPredicted RBP1.67□□□□□ -2.14
TNRC6A-208ENST00000561726 CLASP1Q7Z460 1538 aa1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 USP32Q8NFA0 1604 aa1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 PHRF1Q9P1Y6 1649 aaKnown RBP1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 LINC01549A6NIU2 74 aa1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 ITSN2Q9NZM3 1697 aa1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 NUP188Q5SRE5 1749 aa1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 IFT172Q9UG01 1749 aa1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 LRP6O75581 1613 aa1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 PAPPAQ13219 1627 aa1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 ANKRD50Q9ULJ7 1429 aa1.66□□□□□ -2.14
TNRC6A-208ENST00000561726 UBR3Q6ZT12 1888 aa1.65□□□□□ -2.14
TNRC6A-208ENST00000561726 J3QRE1 110 aa1.65□□□□□ -2.15
TNRC6A-208ENST00000561726 NREPQ16612 68 aa1.65□□□□□ -2.15
TNRC6A-208ENST00000561726 WFDC9Q8NEX5 89 aa1.65□□□□□ -2.15
TNRC6A-208ENST00000561726 LAMC1P11047 1609 aa1.65□□□□□ -2.15
TNRC6A-208ENST00000561726 ALKQ9UM73 1620 aa1.65□□□□□ -2.15
TNRC6A-208ENST00000561726 ALS2Q96Q42 1657 aa1.64□□□□□ -2.15
TNRC6A-208ENST00000561726 DEFB112Q30KQ8 113 aa1.64□□□□□ -2.15
TNRC6A-208ENST00000561726 C10orf99Q6UWK7 81 aa1.64□□□□□ -2.15
TNRC6A-208ENST00000561726 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.64□□□□□ -2.15
TNRC6A-208ENST00000561726 GAFA1Q96PS6 74 aa1.64□□□□□ -2.15
TNRC6A-208ENST00000561726 SYCP2Q9BX26 1530 aa1.64□□□□□ -2.15
TNRC6A-208ENST00000561726 A0A1B0GUL6 1792 aa1.64□□□□□ -2.15
TNRC6A-208ENST00000561726 NHSQ6T4R5 1651 aa1.64□□□□□ -2.15
TNRC6A-208ENST00000561726 ABCA1O95477 2261 aa1.64□□□□□ -2.15
TNRC6A-208ENST00000561726 PKD1L3Q7Z443 1732 aa1.63□□□□□ -2.15
TNRC6A-208ENST00000561726 NHSL1Q5SYE7 1610 aa1.63□□□□□ -2.15
TNRC6A-208ENST00000561726 TOP2AP11388 1531 aaKnown RBP1.63□□□□□ -2.15
TNRC6A-208ENST00000561726 TRBV30A0A0K0K1B3 111 aa1.63□□□□□ -2.15
TNRC6A-208ENST00000561726 TRBV6-1A0A0K0K1D8 114 aa1.63□□□□□ -2.15
TNRC6A-208ENST00000561726 UNQ6190/PRO20217Q6UXQ8 127 aa1.63□□□□□ -2.15
TNRC6A-208ENST00000561726 PLAC4Q8WY50 150 aa1.63□□□□□ -2.15
TNRC6A-208ENST00000561726 C5P01031 1676 aa1.63□□□□□ -2.15
TNRC6A-208ENST00000561726 CPS1P31327 1500 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 MROH2AA6NES4 1674 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 WIZO95785 1651 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 A0A1B0GU69 56 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 KRTAP13-4Q3LI77 160 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 Q6ZRX8 168 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 SMIM11BQ8TCY0 68 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 SAMD9Q5K651 1589 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 MAST1Q9Y2H9 1570 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 TIAM2Q8IVF5 1701 aa1.62□□□□□ -2.15
TNRC6A-208ENST00000561726 TSC2P49815 1807 aa1.61□□□□□ -2.15
TNRC6A-208ENST00000561726 CFAP43Q8NDM7 1665 aa1.61□□□□□ -2.15
TNRC6A-208ENST00000561726 VWDEQ8N2E2 1590 aa1.61□□□□□ -2.15
TNRC6A-208ENST00000561726 A0A096LNT2 108 aa1.61□□□□□ -2.15
TNRC6A-208ENST00000561726 GVQW2A0A096LPI5 108 aaPredicted RBP1.61□□□□□ -2.15
TNRC6A-208ENST00000561726 LCE6AA0A183 80 aa1.61□□□□□ -2.15
TNRC6A-208ENST00000561726 CICQ96RK0 1608 aaPredicted RBP1.61□□□□□ -2.15
TNRC6A-208ENST00000561726 ZNF831Q5JPB2 1677 aa1.61□□□□□ -2.15
TNRC6A-208ENST00000561726 CACNA1GO43497 2377 aa1.61□□□□□ -2.15
TNRC6A-208ENST00000561726 NESP48681 1621 aa1.6□□□□□ -2.15
TNRC6A-208ENST00000561726 G3V318 75 aa1.6□□□□□ -2.15
TNRC6A-208ENST00000561726 NCR3O14931 201 aa1.6□□□□□ -2.15
TNRC6A-208ENST00000561726 HAMPP81172 84 aa1.6□□□□□ -2.15
TNRC6A-208ENST00000561726 ASCC3Q8N3C0 2202 aaKnown RBP1.6□□□□□ -2.15
TNRC6A-208ENST00000561726 LRRC37A2A6NM11 1700 aa1.6□□□□□ -2.15
TNRC6A-208ENST00000561726 F5P12259 2224 aa1.59□□□□□ -2.15
TNRC6A-208ENST00000561726 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
TNRC6A-208ENST00000561726 LINC00959A0A1B0GUT2 108 aa1.59□□□□□ -2.15
TNRC6A-208ENST00000561726 FCER1GP30273 86 aa1.59□□□□□ -2.15
TNRC6A-208ENST00000561726 DEFB103AP81534 67 aa1.59□□□□□ -2.15
TNRC6A-208ENST00000561726 SPINK13Q1W4C9 94 aa1.59□□□□□ -2.15
TNRC6A-208ENST00000561726 ENHOQ6UWT2 76 aa1.59□□□□□ -2.15
TNRC6A-208ENST00000561726 BRD3OSQ6XYD6 125 aa1.59□□□□□ -2.15
TNRC6A-208ENST00000561726 PARP4Q9UKK3 1724 aaKnown RBP1.59□□□□□ -2.16
TNRC6A-208ENST00000561726 LRRC7Q96NW7 1537 aa1.59□□□□□ -2.16
TNRC6A-208ENST00000561726 COL14A1Q05707 1796 aaKnown RBP1.59□□□□□ -2.16
TNRC6A-208ENST00000561726 BCORQ6W2J9 1755 aa1.59□□□□□ -2.16
TNRC6A-208ENST00000561726 UGGT1Q9NYU2 1555 aa1.59□□□□□ -2.16
TNRC6A-208ENST00000561726 RICTORQ6R327 1708 aa1.58□□□□□ -2.16
TNRC6A-208ENST00000561726 CACNA1CQ13936 2221 aa1.58□□□□□ -2.16
TNRC6A-208ENST00000561726 PIN1P1O15428 100 aa1.58□□□□□ -2.16
TNRC6A-208ENST00000561726 LINC00575Q6W349 94 aa1.58□□□□□ -2.16
TNRC6A-208ENST00000561726 PAPPA2Q9BXP8 1791 aa1.57□□□□□ -2.16
TNRC6A-208ENST00000561726 LY6G6CO95867 125 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms