RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
TNRC6A-208ENST00000561726 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
TNRC6A-208ENST00000561726 SENP3Q9H4L4 574 aaPredicted RBP14.74□□□□□ -0.05
TNRC6A-208ENST00000561726 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
TNRC6A-208ENST00000561726 FOXD1Q16676 465 aa13.75□□□□□ -0.21
TNRC6A-208ENST00000561726 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
TNRC6A-208ENST00000561726 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
TNRC6A-208ENST00000561726 ADRA2BP18089 450 aa12.98□□□□□ -0.33
TNRC6A-208ENST00000561726 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
TNRC6A-208ENST00000561726 MSH5O43196 834 aa12.76□□□□□ -0.37
TNRC6A-208ENST00000561726 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
TNRC6A-208ENST00000561726 MAPK8IP2Q13387 824 aaPredicted RBP11.89□□□□□ -0.51
TNRC6A-208ENST00000561726 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
TNRC6A-208ENST00000561726 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
TNRC6A-208ENST00000561726 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
TNRC6A-208ENST00000561726 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
TNRC6A-208ENST00000561726 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
TNRC6A-208ENST00000561726 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
TNRC6A-208ENST00000561726 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
TNRC6A-208ENST00000561726 DCAF8L1A6NGE4 600 aa11.27□□□□□ -0.61
TNRC6A-208ENST00000561726 NPM3O75607 178 aaKnown RBP11.19□□□□□ -0.62
TNRC6A-208ENST00000561726 KCNA4P22459 653 aa11.15□□□□□ -0.62
TNRC6A-208ENST00000561726 RNF39Q9H2S5 420 aa10.93□□□□□ -0.66
TNRC6A-208ENST00000561726 DNAJC5BQ9UF47 199 aa10.89□□□□□ -0.67
TNRC6A-208ENST00000561726 CACNB1Q02641 598 aaPredicted RBP10.87□□□□□ -0.67
TNRC6A-208ENST00000561726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.67
TNRC6A-208ENST00000561726 C1QBPQ07021 282 aaKnown RBP10.75□□□□□ -0.69
TNRC6A-208ENST00000561726 SLC4A2P04920 1241 aa10.65□□□□□ -0.7
TNRC6A-208ENST00000561726 U3KPZ7 1027 aaPredicted RBP10.64□□□□□ -0.71
TNRC6A-208ENST00000561726 SLC4A1APQ9BWU0 796 aaKnown RBP10.54□□□□□ -0.72
TNRC6A-208ENST00000561726 SPINK5Q9NQ38 1064 aaPredicted RBP10.45□□□□□ -0.74
TNRC6A-208ENST00000561726 CAPN15O75808 1086 aa10.41□□□□□ -0.74
TNRC6A-208ENST00000561726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.35□□□□□ -0.75
TNRC6A-208ENST00000561726 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
TNRC6A-208ENST00000561726 MYCNP04198 464 aaPredicted RBP10.32□□□□□ -0.76
TNRC6A-208ENST00000561726 FOXD4L1Q9NU39 408 aa10.32□□□□□ -0.76
TNRC6A-208ENST00000561726 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
TNRC6A-208ENST00000561726 DSG3P32926 999 aa10.3□□□□□ -0.76
TNRC6A-208ENST00000561726 APLP2Q06481 763 aa10.3□□□□□ -0.76
TNRC6A-208ENST00000561726 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
TNRC6A-208ENST00000561726 ZBTB22O15209 634 aa10.27□□□□□ -0.77
TNRC6A-208ENST00000561726 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
TNRC6A-208ENST00000561726 ABCB7O75027 752 aa10.2□□□□□ -0.78
TNRC6A-208ENST00000561726 ATF5Q9Y2D1 282 aaPredicted RBP10.13□□□□□ -0.79
TNRC6A-208ENST00000561726 POLA2Q14181 598 aa10.05□□□□□ -0.8
TNRC6A-208ENST00000561726 ATXN8OSP0DMR3 200 aa9.96□□□□□ -0.82
TNRC6A-208ENST00000561726 CSRNP3Q8WYN3 585 aa9.94□□□□□ -0.82
TNRC6A-208ENST00000561726 EHMT2Q96KQ7 1210 aa9.93□□□□□ -0.82
TNRC6A-208ENST00000561726 ZBTB12Q9Y330 459 aaPredicted RBP9.81□□□□□ -0.84
TNRC6A-208ENST00000561726 RBM42Q9BTD8 480 aaKnown RBP9.78□□□□□ -0.84
TNRC6A-208ENST00000561726 OSCARQ8IYS5 282 aa9.72□□□□□ -0.85
TNRC6A-208ENST00000561726 FBLN2P98095 1184 aa9.66□□□□□ -0.86
TNRC6A-208ENST00000561726 MKRN4PQ13434 485 aaPredicted RBP9.65□□□□□ -0.86
TNRC6A-208ENST00000561726 AKT1S1Q96B36 256 aa9.61□□□□□ -0.87
TNRC6A-208ENST00000561726 POTEHQ6S545 545 aa9.59□□□□□ -0.87
TNRC6A-208ENST00000561726 SPDYE2BA6NHP3 402 aa9.54□□□□□ -0.88
TNRC6A-208ENST00000561726 SPDYE6P0CI01 402 aa9.54□□□□□ -0.88
TNRC6A-208ENST00000561726 SPDYE2Q495Y8 402 aa9.54□□□□□ -0.88
TNRC6A-208ENST00000561726 REM2Q8IYK8 340 aaPredicted RBP9.54□□□□□ -0.88
TNRC6A-208ENST00000561726 CHRDL2Q6WN34 429 aa9.53□□□□□ -0.88
TNRC6A-208ENST00000561726 ZNF692Q9BU19 519 aaPredicted RBP9.48□□□□□ -0.89
TNRC6A-208ENST00000561726 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
TNRC6A-208ENST00000561726 SSUH2Q9Y2M2 353 aa9.44□□□□□ -0.9
TNRC6A-208ENST00000561726 PABPN1Q86U42 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
TNRC6A-208ENST00000561726 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
TNRC6A-208ENST00000561726 CLEC11AQ9Y240 323 aa9.34□□□□□ -0.91
TNRC6A-208ENST00000561726 SPDYE1Q8NFV5 336 aaPredicted RBP9.33□□□□□ -0.92
TNRC6A-208ENST00000561726 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
TNRC6A-208ENST00000561726 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.93
TNRC6A-208ENST00000561726 PRR29P0C7W0 189 aa9.2□□□□□ -0.94
TNRC6A-208ENST00000561726 PRKAR2AP13861 404 aaKnown RBP9.2□□□□□ -0.94
TNRC6A-208ENST00000561726 CHADLQ6NUI6 762 aa9.17□□□□□ -0.94
TNRC6A-208ENST00000561726 HAX1O00165 279 aa9.14□□□□□ -0.95
TNRC6A-208ENST00000561726 STAG3Q9UJ98 1225 aa9.09□□□□□ -0.95
TNRC6A-208ENST00000561726 EVX2Q03828 476 aa9.07□□□□□ -0.96
TNRC6A-208ENST00000561726 PROM2Q8N271 834 aa9.06□□□□□ -0.96
TNRC6A-208ENST00000561726 SP7Q8TDD2 431 aaPredicted RBP9.06□□□□□ -0.96
TNRC6A-208ENST00000561726 CREBZFQ9NS37 354 aa9.02□□□□□ -0.97
TNRC6A-208ENST00000561726 C19orf67A6NJJ6 358 aa9.01□□□□□ -0.97
TNRC6A-208ENST00000561726 FKBP8Q14318 412 aa9.01□□□□□ -0.97
TNRC6A-208ENST00000561726 FARP1Q9Y4F1 1045 aaPredicted RBP9.01□□□□□ -0.97
TNRC6A-208ENST00000561726 CD44P16070 742 aaKnown RBP8.92□□□□□ -0.98
TNRC6A-208ENST00000561726 MNX1P50219 401 aaPredicted RBP8.89□□□□□ -0.99
TNRC6A-208ENST00000561726 GABBR2O75899 941 aa8.85□□□□□ -0.99
TNRC6A-208ENST00000561726 NPM1P06748 294 aaKnown RBP eCLIP8.83□□□□□ -1
TNRC6A-208ENST00000561726 MIER1Q8N108 512 aa8.83□□□□□ -1
TNRC6A-208ENST00000561726 ZRANB1Q9UGI0 708 aa8.82□□□□□ -1
TNRC6A-208ENST00000561726 PLCD3Q8N3E9 789 aa8.78□□□□□ -1
TNRC6A-208ENST00000561726 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
TNRC6A-208ENST00000561726 ZNF579Q8NAF0 562 aaKnown RBP8.77□□□□□ -1.01
TNRC6A-208ENST00000561726 PAK3O75914 559 aaPredicted RBP8.75□□□□□ -1.01
TNRC6A-208ENST00000561726 PHF12Q96QT6 1004 aa8.73□□□□□ -1.01
TNRC6A-208ENST00000561726 TSPYL2Q9H2G4 693 aaPredicted RBP8.72□□□□□ -1.01
TNRC6A-208ENST00000561726 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
TNRC6A-208ENST00000561726 CLCN6P51797 869 aa8.7□□□□□ -1.02
TNRC6A-208ENST00000561726 GALR2O43603 387 aaPredicted RBP8.68□□□□□ -1.02
TNRC6A-208ENST00000561726 POTEIP0CG38 1075 aa8.68□□□□□ -1.02
TNRC6A-208ENST00000561726 RASEFQ8IZ41 740 aa8.68□□□□□ -1.02
TNRC6A-208ENST00000561726 ZBTB47Q9UFB7 747 aaPredicted RBP8.66□□□□□ -1.02
TNRC6A-208ENST00000561726 CCDC61Q9Y6R9 512 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms