RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 KIAA0556O60303 1618 aa0.8□□□□□ -2.28
SCARNA3-201ENST00000517097 WFDC2Q14508 124 aa0.8□□□□□ -2.28
SCARNA3-201ENST00000517097 ADIRFQ15847 76 aa0.8□□□□□ -2.28
SCARNA3-201ENST00000517097 UBE2DNLQ8IWF7 75 aa0.8□□□□□ -2.28
SCARNA3-201ENST00000517097 LINC01600Q96MT4 127 aa0.8□□□□□ -2.28
SCARNA3-201ENST00000517097 TSC2P49815 1807 aa0.8□□□□□ -2.28
SCARNA3-201ENST00000517097 ABCA8O94911 1581 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 IQGAP3Q86VI3 1631 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 TIAM2Q8IVF5 1701 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 BCORQ6W2J9 1755 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 A0A0D9SG42 100 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 D6R8Y8 96 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 LEPROTL1O95214 131 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 MUSTN1Q8IVN3 82 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 DEFB107AQ8IZN7 70 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 PLAC8Q9NZF1 115 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 KCPQ6ZWJ8 1503 aa0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.79□□□□□ -2.28
SCARNA3-201ENST00000517097 POLR1AO95602 1720 aaPredicted RBP0.78□□□□□ -2.28
SCARNA3-201ENST00000517097 TRBV6-1A0A0K0K1D8 114 aa0.78□□□□□ -2.28
SCARNA3-201ENST00000517097 KANTRA0A1W2PQU2 76 aa0.78□□□□□ -2.28
SCARNA3-201ENST00000517097 IQCF6A8MYZ5 107 aa0.78□□□□□ -2.28
SCARNA3-201ENST00000517097 ACYP1P07311 99 aa0.78□□□□□ -2.28
SCARNA3-201ENST00000517097 SPATA8Q6RVD6 105 aa0.78□□□□□ -2.28
SCARNA3-201ENST00000517097 LINC00643Q86TS7 51 aa0.78□□□□□ -2.28
SCARNA3-201ENST00000517097 GOLGA4Q13439 2230 aaKnown RBP0.78□□□□□ -2.28
SCARNA3-201ENST00000517097 PIK3C2BO00750 1634 aa0.78□□□□□ -2.29
SCARNA3-201ENST00000517097 PAPPAQ13219 1627 aa0.78□□□□□ -2.29
SCARNA3-201ENST00000517097 ZNF831Q5JPB2 1677 aa0.78□□□□□ -2.29
SCARNA3-201ENST00000517097 ZC3H13Q5T200 1668 aaKnown RBP0.78□□□□□ -2.29
SCARNA3-201ENST00000517097 MYMXA0A1B0GTQ4 84 aa0.77□□□□□ -2.29
SCARNA3-201ENST00000517097 H0Y9P7 68 aa0.77□□□□□ -2.29
SCARNA3-201ENST00000517097 SPINK7P58062 85 aa0.77□□□□□ -2.29
SCARNA3-201ENST00000517097 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
SCARNA3-201ENST00000517097 SSBP3-AS1Q7Z2R9 100 aa0.77□□□□□ -2.29
SCARNA3-201ENST00000517097 C10orf95Q9H7T3 257 aa0.77□□□□□ -2.29
SCARNA3-201ENST00000517097 DNMBPQ6XZF7 1577 aa0.77□□□□□ -2.29
SCARNA3-201ENST00000517097 ITSN1Q15811 1721 aa0.77□□□□□ -2.29
SCARNA3-201ENST00000517097 JMJD1CQ15652 2540 aa0.77□□□□□ -2.29
SCARNA3-201ENST00000517097 OTOGLQ3ZCN5 2332 aa0.76□□□□□ -2.29
SCARNA3-201ENST00000517097 LRRC37AA6NMS7 1700 aa0.76□□□□□ -2.29
SCARNA3-201ENST00000517097 CCDC88BA6NC98 1476 aa0.76□□□□□ -2.29
SCARNA3-201ENST00000517097 LRRC9Q6ZRR7 1453 aa0.76□□□□□ -2.29
SCARNA3-201ENST00000517097 GNGT1P63211 74 aa0.76□□□□□ -2.29
SCARNA3-201ENST00000517097 BVES-AS1Q5T3Y7 98 aa0.76□□□□□ -2.29
SCARNA3-201ENST00000517097 UBE2D4Q9Y2X8 147 aa0.76□□□□□ -2.29
SCARNA3-201ENST00000517097 FAM208BQ5VWN6 2430 aa0.76□□□□□ -2.29
SCARNA3-201ENST00000517097 CFAP43Q8NDM7 1665 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 SAMD9Q5K651 1589 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 ZNF462Q96JM2 2506 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 USF3Q68DE3 2245 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 H3BUT2 72 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 IGLC2P0DOY2 106 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 IGLC3P0DOY3 106 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 S100A3P33764 101 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 PLGLAQ15195 96 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 C6orf201Q7Z4U5 140 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 FAM103A1Q9BTL3 118 aaKnown RBP0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 DOT1LQ8TEK3 1739 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 FMN2Q9NZ56 1722 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 PARP4Q9UKK3 1724 aaKnown RBP0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 PLCH1Q4KWH8 1693 aa0.75□□□□□ -2.29
SCARNA3-201ENST00000517097 ABCC1P33527 1531 aa0.74□□□□□ -2.29
SCARNA3-201ENST00000517097 ATP7BP35670 1465 aa0.74□□□□□ -2.29
SCARNA3-201ENST00000517097 A0A1B0GU69 56 aa0.74□□□□□ -2.29
SCARNA3-201ENST00000517097 TULP4Q9NRJ4 1543 aa0.74□□□□□ -2.29
SCARNA3-201ENST00000517097 ANKARQ7Z5J8 1434 aa0.73□□□□□ -2.29
SCARNA3-201ENST00000517097 ASH1LQ9NR48 2969 aaKnown RBP0.73□□□□□ -2.29
SCARNA3-201ENST00000517097 CEBPZOSA8MTT3 80 aa0.73□□□□□ -2.29
SCARNA3-201ENST00000517097 HELZ2Q9BYK8 2649 aaKnown RBP0.73□□□□□ -2.29
SCARNA3-201ENST00000517097 CEP170BQ9Y4F5 1589 aaPredicted RBP0.73□□□□□ -2.29
SCARNA3-201ENST00000517097 UGGT2Q9NYU1 1516 aa0.73□□□□□ -2.29
SCARNA3-201ENST00000517097 NCOA2Q15596 1464 aa0.73□□□□□ -2.29
SCARNA3-201ENST00000517097 CACNA1HO95180 2353 aa0.72□□□□□ -2.29
SCARNA3-201ENST00000517097 A0A0D9SFI3 127 aa0.72□□□□□ -2.29
SCARNA3-201ENST00000517097 LINC00959A0A1B0GUT2 108 aa0.72□□□□□ -2.29
SCARNA3-201ENST00000517097 SLIT1O75093 1534 aa0.72□□□□□ -2.29
SCARNA3-201ENST00000517097 WIZO95785 1651 aa0.72□□□□□ -2.29
SCARNA3-201ENST00000517097 ADAMTS12P58397 1594 aa0.71□□□□□ -2.3
SCARNA3-201ENST00000517097 LRRC7Q96NW7 1537 aa0.71□□□□□ -2.3
SCARNA3-201ENST00000517097 TRBV7-4A0A0J9YYF1 115 aa0.71□□□□□ -2.3
SCARNA3-201ENST00000517097 A0A1B0GUT8 65 aa0.71□□□□□ -2.3
SCARNA3-201ENST00000517097 COX6A2Q02221 97 aa0.71□□□□□ -2.3
SCARNA3-201ENST00000517097 C18orf32Q8TCD1 76 aa0.71□□□□□ -2.3
SCARNA3-201ENST00000517097 CNFNQ9BYD5 112 aa0.71□□□□□ -2.3
SCARNA3-201ENST00000517097 TP53AIP1Q9HCN2 124 aa0.71□□□□□ -2.3
SCARNA3-201ENST00000517097 BIVM-ERCC5R4GMW8 1640 aa0.71□□□□□ -2.3
SCARNA3-201ENST00000517097 SETBP1Q9Y6X0 1596 aa0.7□□□□□ -2.3
SCARNA3-201ENST00000517097 NKTRP30414 1462 aaKnown RBP0.7□□□□□ -2.3
SCARNA3-201ENST00000517097 I3L2K1 104 aa0.7□□□□□ -2.3
SCARNA3-201ENST00000517097 DEFB121Q5J5C9 76 aa0.7□□□□□ -2.3
SCARNA3-201ENST00000517097 URB2Q14146 1524 aaKnown RBP0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 MAGI3Q5TCQ9 1506 aa0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 C2CD3Q4AC94 2353 aa0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 CCDC141Q6ZP82 1450 aa0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 MROH1Q8NDA8 1641 aa0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 CICQ96RK0 1608 aaPredicted RBP0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 CFDP00746 253 aaPredicted RBP0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 DEFB112Q30KQ8 113 aa0.69□□□□□ -2.3
SCARNA3-201ENST00000517097 SMCO4Q9NRQ5 59 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms