RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 ABCA10Q8WWZ4 1543 aa2.29□□□□□ -2.04
R3HDM1-216ENST00000483065 RALGAPBQ86X10 1494 aa2.29□□□□□ -2.04
R3HDM1-216ENST00000483065 A0A1B0GU69 56 aa2.29□□□□□ -2.04
R3HDM1-216ENST00000483065 C3orf79P0CE67 100 aa2.29□□□□□ -2.04
R3HDM1-216ENST00000483065 HILPDAQ9Y5L2 63 aa2.29□□□□□ -2.04
R3HDM1-216ENST00000483065 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
R3HDM1-216ENST00000483065 CD163L1Q9NR16 1453 aa2.28□□□□□ -2.04
R3HDM1-216ENST00000483065 DOCK10Q96BY6 2186 aa2.28□□□□□ -2.04
R3HDM1-216ENST00000483065 PRRC2BQ5JSZ5 2229 aaKnown RBP2.27□□□□□ -2.05
R3HDM1-216ENST00000483065 SPINK7P58062 85 aa2.27□□□□□ -2.05
R3HDM1-216ENST00000483065 DEFB112Q30KQ8 113 aa2.27□□□□□ -2.05
R3HDM1-216ENST00000483065 FREM1Q5H8C1 2179 aa2.27□□□□□ -2.05
R3HDM1-216ENST00000483065 PLXNC1O60486 1568 aa2.27□□□□□ -2.05
R3HDM1-216ENST00000483065 VWDEQ8N2E2 1590 aa2.27□□□□□ -2.05
R3HDM1-216ENST00000483065 CEP170BQ9Y4F5 1589 aaPredicted RBP2.27□□□□□ -2.05
R3HDM1-216ENST00000483065 RPL38P63173 70 aaKnown RBP2.26□□□□□ -2.05
R3HDM1-216ENST00000483065 WFDC9Q8NEX5 89 aa2.26□□□□□ -2.05
R3HDM1-216ENST00000483065 GAFA1Q96PS6 74 aa2.26□□□□□ -2.05
R3HDM1-216ENST00000483065 ESPL1Q14674 2120 aa2.26□□□□□ -2.05
R3HDM1-216ENST00000483065 TET1Q8NFU7 2136 aa2.26□□□□□ -2.05
R3HDM1-216ENST00000483065 ICE1Q9Y2F5 2266 aa2.25□□□□□ -2.05
R3HDM1-216ENST00000483065 PAPPAQ13219 1627 aa2.25□□□□□ -2.05
R3HDM1-216ENST00000483065 CDC42BPGQ6DT37 1551 aa2.25□□□□□ -2.05
R3HDM1-216ENST00000483065 TRAV21A0A0B4J279 112 aa2.25□□□□□ -2.05
R3HDM1-216ENST00000483065 G3V318 75 aa2.25□□□□□ -2.05
R3HDM1-216ENST00000483065 SPTBP11277 2137 aa2.25□□□□□ -2.05
R3HDM1-216ENST00000483065 UBE2DNLQ8IWF7 75 aa2.25□□□□□ -2.05
R3HDM1-216ENST00000483065 LMTK2Q8IWU2 1503 aa2.25□□□□□ -2.05
R3HDM1-216ENST00000483065 ABCA4P78363 2273 aa2.25□□□□□ -2.05
R3HDM1-216ENST00000483065 ARFGEF2Q9Y6D5 1785 aa2.24□□□□□ -2.05
R3HDM1-216ENST00000483065 A0A0D9SFI3 127 aa2.24□□□□□ -2.05
R3HDM1-216ENST00000483065 IFI6P09912 130 aa2.24□□□□□ -2.05
R3HDM1-216ENST00000483065 NREPQ16612 68 aa2.24□□□□□ -2.05
R3HDM1-216ENST00000483065 PLCH1Q4KWH8 1693 aa2.24□□□□□ -2.05
R3HDM1-216ENST00000483065 ABCA9Q8IUA7 1624 aa2.24□□□□□ -2.05
R3HDM1-216ENST00000483065 USP32Q8NFA0 1604 aa2.24□□□□□ -2.05
R3HDM1-216ENST00000483065 XRN1Q8IZH2 1706 aaKnown RBP2.23□□□□□ -2.05
R3HDM1-216ENST00000483065 DOCK11Q5JSL3 2073 aa2.23□□□□□ -2.05
R3HDM1-216ENST00000483065 LY6G6CO95867 125 aa2.23□□□□□ -2.05
R3HDM1-216ENST00000483065 COL4A4P53420 1690 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-216ENST00000483065 NHSQ6T4R5 1651 aa2.22□□□□□ -2.05
R3HDM1-216ENST00000483065 FXYD6-FXYD2A0A087WZ82 144 aa2.22□□□□□ -2.05
R3HDM1-216ENST00000483065 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-216ENST00000483065 A0A0G2JMZ2 1700 aa2.22□□□□□ -2.05
R3HDM1-216ENST00000483065 KMT2BQ9UMN6 2715 aaPredicted RBP2.21□□□□□ -2.06
R3HDM1-216ENST00000483065 KIAA0556O60303 1618 aa2.21□□□□□ -2.06
R3HDM1-216ENST00000483065 J3QKU1 62 aa2.21□□□□□ -2.06
R3HDM1-216ENST00000483065 COL4A1P02462 1669 aa2.21□□□□□ -2.06
R3HDM1-216ENST00000483065 LRRC7Q96NW7 1537 aa2.21□□□□□ -2.06
R3HDM1-216ENST00000483065 CICQ96RK0 1608 aaPredicted RBP2.2□□□□□ -2.06
R3HDM1-216ENST00000483065 PKD1L3Q7Z443 1732 aa2.2□□□□□ -2.06
R3HDM1-216ENST00000483065 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
R3HDM1-216ENST00000483065 SSBP3-AS1Q7Z2R9 100 aa2.2□□□□□ -2.06
R3HDM1-216ENST00000483065 ITSN1Q15811 1721 aa2.2□□□□□ -2.06
R3HDM1-216ENST00000483065 ZNF236Q9UL36 1845 aa2.19□□□□□ -2.06
R3HDM1-216ENST00000483065 LCE6AA0A183 80 aa2.19□□□□□ -2.06
R3HDM1-216ENST00000483065 KRTAP10-10P60014 251 aa2.19□□□□□ -2.06
R3HDM1-216ENST00000483065 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
R3HDM1-216ENST00000483065 LRP6O75581 1613 aa2.19□□□□□ -2.06
R3HDM1-216ENST00000483065 MAP2P11137 1827 aaKnown RBP2.19□□□□□ -2.06
R3HDM1-216ENST00000483065 SSC5DA1L4H1 1573 aa2.19□□□□□ -2.06
R3HDM1-216ENST00000483065 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
R3HDM1-216ENST00000483065 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
R3HDM1-216ENST00000483065 UBL5Q9BZL1 73 aa2.18□□□□□ -2.06
R3HDM1-216ENST00000483065 CACNA1GO43497 2377 aa2.18□□□□□ -2.06
R3HDM1-216ENST00000483065 PRXQ9BXM0 1461 aa2.18□□□□□ -2.06
R3HDM1-216ENST00000483065 ERCC6L2Q5T890 1561 aa2.18□□□□□ -2.06
R3HDM1-216ENST00000483065 MAST1Q9Y2H9 1570 aa2.18□□□□□ -2.06
R3HDM1-216ENST00000483065 COX7BP24311 80 aa2.17□□□□□ -2.06
R3HDM1-216ENST00000483065 FAM103A1Q9BTL3 118 aaKnown RBP2.17□□□□□ -2.06
R3HDM1-216ENST00000483065 BAHCC1Q9P281 2608 aa2.17□□□□□ -2.06
R3HDM1-216ENST00000483065 NHSL1Q5SYE7 1610 aa2.17□□□□□ -2.06
R3HDM1-216ENST00000483065 K7EIL1 84 aa2.16□□□□□ -2.06
R3HDM1-216ENST00000483065 PRB1P04280 392 aa2.16□□□□□ -2.06
R3HDM1-216ENST00000483065 EIF2AK4Q9P2K8 1649 aaKnown RBP2.16□□□□□ -2.06
R3HDM1-216ENST00000483065 LRRC37AA6NMS7 1700 aa2.15□□□□□ -2.07
R3HDM1-216ENST00000483065 ANGP03950 147 aaKnown RBP2.15□□□□□ -2.07
R3HDM1-216ENST00000483065 ABCA6Q8N139 1617 aa2.15□□□□□ -2.07
R3HDM1-216ENST00000483065 INTS1Q8N201 2190 aaKnown RBP2.15□□□□□ -2.07
R3HDM1-216ENST00000483065 DIP2AQ14689 1571 aa2.15□□□□□ -2.07
R3HDM1-216ENST00000483065 MYO7BQ6PIF6 2116 aa2.14□□□□□ -2.07
R3HDM1-216ENST00000483065 RNF17Q9BXT8 1623 aaKnown RBP2.14□□□□□ -2.07
R3HDM1-216ENST00000483065 LINC01549A6NIU2 74 aa2.14□□□□□ -2.07
R3HDM1-216ENST00000483065 CFAP43Q8NDM7 1665 aa2.14□□□□□ -2.07
R3HDM1-216ENST00000483065 PREX1Q8TCU6 1659 aa2.13□□□□□ -2.07
R3HDM1-216ENST00000483065 SPTY2D1-AS1A0A0U1RR47 76 aa2.13□□□□□ -2.07
R3HDM1-216ENST00000483065 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
R3HDM1-216ENST00000483065 SNRPGP15A8MWD9 76 aa2.12□□□□□ -2.07
R3HDM1-216ENST00000483065 USMG5Q96IX5 58 aa2.12□□□□□ -2.07
R3HDM1-216ENST00000483065 SYCP2Q9BX26 1530 aa2.12□□□□□ -2.07
R3HDM1-216ENST00000483065 LINC00959A0A1B0GUT2 108 aa2.11□□□□□ -2.07
R3HDM1-216ENST00000483065 SERF2P84101 59 aa2.11□□□□□ -2.07
R3HDM1-216ENST00000483065 KRTAP21-3Q3LHN1 58 aa2.11□□□□□ -2.07
R3HDM1-216ENST00000483065 PIGYQ3MUY2 71 aa2.11□□□□□ -2.07
R3HDM1-216ENST00000483065 WIZO95785 1651 aa2.11□□□□□ -2.07
R3HDM1-216ENST00000483065 ALS2Q96Q42 1657 aa2.1□□□□□ -2.07
R3HDM1-216ENST00000483065 NDUFA4O00483 81 aa2.1□□□□□ -2.07
R3HDM1-216ENST00000483065 LYNX1P0DP58 116 aa2.1□□□□□ -2.07
R3HDM1-216ENST00000483065 SPINK9Q5DT21 86 aa2.1□□□□□ -2.07
R3HDM1-216ENST00000483065 ENHOQ6UWT2 76 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms