RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 H7BZZ5 65 aa0.03□□□□□ -2.4
RAB5A-207ENST00000473608 COX6B1P14854 86 aa0.03□□□□□ -2.4
RAB5A-207ENST00000473608 NCMAPQ5T1S8 102 aa0.03□□□□□ -2.4
RAB5A-207ENST00000473608 PMCHL2Q9BQD1 86 aa0.03□□□□□ -2.4
RAB5A-207ENST00000473608 NUP188Q5SRE5 1749 aa0.03□□□□□ -2.4
RAB5A-207ENST00000473608 FLNAP21333 2647 aaKnown RBP0.03□□□□□ -2.4
RAB5A-207ENST00000473608 ANKRD36BQ8N2N9 1353 aa0.03□□□□□ -2.4
RAB5A-207ENST00000473608 PDCD11Q14690 1871 aaKnown RBP0.03□□□□□ -2.41
RAB5A-207ENST00000473608 KMT2AQ03164 3969 aa0.03□□□□□ -2.41
RAB5A-207ENST00000473608 HMCN2Q8NDA2 5059 aa0.03□□□□□ -2.41
RAB5A-207ENST00000473608 SPRR1BP22528 89 aa0.02□□□□□ -2.41
RAB5A-207ENST00000473608 ASIPP42127 132 aa0.02□□□□□ -2.41
RAB5A-207ENST00000473608 TRGV9Q99603 122 aa0.02□□□□□ -2.41
RAB5A-207ENST00000473608 ATRQ13535 2644 aa0.02□□□□□ -2.41
RAB5A-207ENST00000473608 GAPVD1Q14C86 1478 aa0.02□□□□□ -2.41
RAB5A-207ENST00000473608 MLH3Q9UHC1 1453 aa0.02□□□□□ -2.41
RAB5A-207ENST00000473608 TRBV25-1A0A075B6N4 114 aa0.01□□□□□ -2.41
RAB5A-207ENST00000473608 URB1O60287 2271 aaKnown RBP0.01□□□□□ -2.41
RAB5A-207ENST00000473608 DCHS2Q6V1P9 2916 aa0□□□□□ -2.41
RAB5A-207ENST00000473608 PLEKHH2Q8IVE3 1493 aa0□□□□□ -2.41
RAB5A-207ENST00000473608 TEX14Q8IWB6 1497 aa0□□□□□ -2.41
RAB5A-207ENST00000473608 NLRP1Q9C000 1473 aa0□□□□□ -2.41
RAB5A-207ENST00000473608 AP4S1Q9Y587 144 aa0□□□□□ -2.41
RAB5A-207ENST00000473608 MAP1BP46821 2468 aaKnown RBP-0.01□□□□□ -2.41
RAB5A-207ENST00000473608 CSPG4Q6UVK1 2322 aa-0.01□□□□□ -2.41
RAB5A-207ENST00000473608 K7EQZ3 153 aa-0.01□□□□□ -2.41
RAB5A-207ENST00000473608 PMCHL1Q16048 86 aa-0.01□□□□□ -2.41
RAB5A-207ENST00000473608 VAMP8Q9BV40 100 aa-0.01□□□□□ -2.41
RAB5A-207ENST00000473608 DPY30Q9C005 99 aa-0.01□□□□□ -2.41
RAB5A-207ENST00000473608 XRN1Q8IZH2 1706 aaKnown RBP-0.01□□□□□ -2.41
RAB5A-207ENST00000473608 M0R143 59 aa-0.02□□□□□ -2.41
RAB5A-207ENST00000473608 ATOX1O00244 68 aa-0.02□□□□□ -2.41
RAB5A-207ENST00000473608 LINC00032P0C843 101 aa-0.02□□□□□ -2.41
RAB5A-207ENST00000473608 SERP2Q8N6R1 65 aa-0.02□□□□□ -2.41
RAB5A-207ENST00000473608 MYCBP2O75592 4640 aa-0.02□□□□□ -2.41
RAB5A-207ENST00000473608 TSC2P49815 1807 aa-0.03□□□□□ -2.41
RAB5A-207ENST00000473608 CHD8Q9HCK8 2581 aa-0.03□□□□□ -2.41
RAB5A-207ENST00000473608 PSMG4Q5JS54 123 aa-0.03□□□□□ -2.41
RAB5A-207ENST00000473608 ABCC10Q5T3U5 1492 aa-0.03□□□□□ -2.41
RAB5A-207ENST00000473608 FYCO1Q9BQS8 1478 aa-0.03□□□□□ -2.41
RAB5A-207ENST00000473608 DNAJC13O75165 2243 aa-0.04□□□□□ -2.42
RAB5A-207ENST00000473608 SETBP1Q9Y6X0 1596 aa-0.04□□□□□ -2.42
RAB5A-207ENST00000473608 WNK1Q9H4A3 2382 aa-0.04□□□□□ -2.42
RAB5A-207ENST00000473608 NRXN1Q9ULB1 1477 aa-0.04□□□□□ -2.42
RAB5A-207ENST00000473608 A0A0G2JMZ2 1700 aa-0.04□□□□□ -2.42
RAB5A-207ENST00000473608 VPS8Q8N3P4 1428 aa-0.04□□□□□ -2.42
RAB5A-207ENST00000473608 PRM1P04553 51 aa-0.05□□□□□ -2.42
RAB5A-207ENST00000473608 UQCRHP07919 91 aa-0.05□□□□□ -2.42
RAB5A-207ENST00000473608 DEFB107AQ8IZN7 70 aa-0.05□□□□□ -2.42
RAB5A-207ENST00000473608 FAT2Q9NYQ8 4349 aa-0.05□□□□□ -2.42
RAB5A-207ENST00000473608 APC2O95996 2303 aa-0.05□□□□□ -2.42
RAB5A-207ENST00000473608 A0A1B0GU69 56 aa-0.06□□□□□ -2.42
RAB5A-207ENST00000473608 C6orf201Q7Z4U5 140 aa-0.06□□□□□ -2.42
RAB5A-207ENST00000473608 KIAA0556O60303 1618 aa-0.06□□□□□ -2.42
RAB5A-207ENST00000473608 PAPPA2Q9BXP8 1791 aa-0.06□□□□□ -2.42
RAB5A-207ENST00000473608 LPAP08519 4548 aa-0.07□□□□□ -2.42
RAB5A-207ENST00000473608 H3BQF6 201 aa-0.07□□□□□ -2.42
RAB5A-207ENST00000473608 SYS1-DBNDD2H3BUS1 97 aa-0.07□□□□□ -2.42
RAB5A-207ENST00000473608 SNHG12Q9BXW3 62 aa-0.07□□□□□ -2.42
RAB5A-207ENST00000473608 SETXQ7Z333 2677 aaKnown RBP-0.07□□□□□ -2.42
RAB5A-207ENST00000473608 KNDC1Q76NI1 1749 aa-0.07□□□□□ -2.42
RAB5A-207ENST00000473608 TRBV7-7A0A0K0K1E9 115 aa-0.08□□□□□ -2.42
RAB5A-207ENST00000473608 H0Y9P7 68 aa-0.08□□□□□ -2.42
RAB5A-207ENST00000473608 S100A8P05109 93 aa-0.08□□□□□ -2.42
RAB5A-207ENST00000473608 ARMS2P0C7Q2 107 aa-0.08□□□□□ -2.42
RAB5A-207ENST00000473608 FAUP35544 74 aaKnown RBP-0.08□□□□□ -2.42
RAB5A-207ENST00000473608 COL5A1-AS1Q5SY13 56 aa-0.08□□□□□ -2.42
RAB5A-207ENST00000473608 BSNQ9UPA5 3926 aa-0.08□□□□□ -2.42
RAB5A-207ENST00000473608 DSTQ03001 7570 aaKnown RBP-0.08□□□□□ -2.42
RAB5A-207ENST00000473608 RAPGEF2Q9Y4G8 1499 aa-0.09□□□□□ -2.42
RAB5A-207ENST00000473608 TENM2Q9NT68 2774 aa-0.09□□□□□ -2.42
RAB5A-207ENST00000473608 TNXBP22105 4242 aa-0.09□□□□□ -2.42
RAB5A-207ENST00000473608 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
RAB5A-207ENST00000473608 MARF1Q9Y4F3 1742 aaKnown RBP-0.1□□□□□ -2.42
RAB5A-207ENST00000473608 STAB1Q9NY15 2570 aa-0.1□□□□□ -2.43
RAB5A-207ENST00000473608 HSPG2P98160 4391 aa-0.1□□□□□ -2.43
RAB5A-207ENST00000473608 SPRR2DP22532 72 aa-0.1□□□□□ -2.43
RAB5A-207ENST00000473608 PKIAP61925 76 aa-0.1□□□□□ -2.43
RAB5A-207ENST00000473608 KRTAP6-1Q3LI64 71 aa-0.1□□□□□ -2.43
RAB5A-207ENST00000473608 USMG5Q96IX5 58 aa-0.1□□□□□ -2.43
RAB5A-207ENST00000473608 ALMS1Q8TCU4 4167 aa-0.1□□□□□ -2.43
RAB5A-207ENST00000473608 EP300Q09472 2414 aaPredicted RBP-0.11□□□□□ -2.43
RAB5A-207ENST00000473608 SLIT1O75093 1534 aa-0.11□□□□□ -2.43
RAB5A-207ENST00000473608 TARBP1Q13395 1621 aaKnown RBP-0.11□□□□□ -2.43
RAB5A-207ENST00000473608 CREBBPQ92793 2442 aa-0.11□□□□□ -2.43
RAB5A-207ENST00000473608 PRKDCP78527 4128 aaKnown RBP-0.11□□□□□ -2.43
RAB5A-207ENST00000473608 GNGT1P63211 74 aa-0.12□□□□□ -2.43
RAB5A-207ENST00000473608 LRP2P98164 4655 aa-0.12□□□□□ -2.43
RAB5A-207ENST00000473608 KLK9Q2XQG4 91 aa-0.12□□□□□ -2.43
RAB5A-207ENST00000473608 PSENENQ9NZ42 101 aa-0.12□□□□□ -2.43
RAB5A-207ENST00000473608 CRIPTQ9P021 101 aa-0.12□□□□□ -2.43
RAB5A-207ENST00000473608 EDC4Q6P2E9 1401 aaKnown RBP-0.13□□□□□ -2.43
RAB5A-207ENST00000473608 FMN2Q9NZ56 1722 aa-0.13□□□□□ -2.43
RAB5A-207ENST00000473608 ACANP16112 2415 aa-0.13□□□□□ -2.43
RAB5A-207ENST00000473608 SHPRHQ149N8 1683 aa-0.13□□□□□ -2.43
RAB5A-207ENST00000473608 UQCRHLA0A096LP55 91 aa-0.13□□□□□ -2.43
RAB5A-207ENST00000473608 COX8AP10176 69 aa-0.13□□□□□ -2.43
RAB5A-207ENST00000473608 DEFB105AQ8NG35 78 aa-0.13□□□□□ -2.43
RAB5A-207ENST00000473608 ANKRD26Q9UPS8 1709 aa-0.13□□□□□ -2.43
RAB5A-207ENST00000473608 ABCC2Q92887 1545 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 273.3 ms