RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 A0A1W2PPM0 123 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 IGIPA6NJ69 53 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 ZNF815PA8K554 130 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 M0QY20 66 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 P0DMU3 169 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 FAM231AP0DMU4 169 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 FAM231CP0DMU5 169 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 HINT1P49773 126 aaPredicted RBP2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 DEFB114Q30KQ6 69 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 RANBP2P49792 3224 aaKnown RBP2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 CDH23Q9H251 3354 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 LAMA2P24043 3122 aaKnown RBP2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 DIDO1Q9BTC0 2240 aaKnown RBP2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 NAV3Q8IVL0 2385 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 TRBV7-3A0A075B6L6 115 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 TRBV10-2A0A0K0K1G8 114 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 A0A1B0GX51 115 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 H3BMG7 143 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 ACYP1P07311 99 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 BLCAPP62952 87 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 RRN3P1Q2M238 152 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 KTN1-AS1Q86SY8 53 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 AMELXQ99217 191 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 CST9LQ9H4G1 147 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 MRPL35Q9NZE8 188 aaKnown RBP2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 SPCS1Q9Y6A9 102 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 ACACAQ13085 2346 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 XIRP2A4UGR9 3374 aa2.31□□□□□ -2.04
NUDCD1-202ENST00000427660 TRAV12-3A0A0B4J271 114 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 H3BNG1 76 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 J3QQQ9 107 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 TAX1BP3O14907 124 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 IGLV1-51P01701 117 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 DEFB131AP59861 70 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 RAB37Q96AX2 223 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 TIMM8BQ9Y5J9 83 aaPredicted RBP2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 MUC6Q6W4X9 2439 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 SZT2Q5T011 3432 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 ARHGAP32A7KAX9 2087 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 GVINP1Q7Z2Y8 2422 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 WDR87Q6ZQQ6 2873 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 NDUFA1O15239 70 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 UBE2D1P51668 147 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 PRO2289Q9P1D8 64 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 COL6A6A6NMZ7 2263 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 PRUNE2Q8WUY3 3088 aa2.3□□□□□ -2.04
NUDCD1-202ENST00000427660 TRAV13-2A0A0B4J235 113 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 TRBV30A0A0K0K1B3 111 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 TCL1BO95988 128 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 MIFP14174 115 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 FUSP35637 526 aaKnown RBP eCLIP2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 COX17Q14061 63 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 SS18Q15532 418 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 SPINK13Q1W4C9 94 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 TMEM170BQ5T4T1 132 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 ATOH7Q8N100 152 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 PRO1854Q9UHT4 67 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 APC2O95996 2303 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 FAM74A4Q5TZK3 123 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 CFAP126Q5VTH2 177 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 ERG28Q9UKR5 140 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 UBE2D4Q9Y2X8 147 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 LAMA3Q16787 3333 aa2.29□□□□□ -2.04
NUDCD1-202ENST00000427660 LAMA1P25391 3075 aa2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 PIEZO2Q9H5I5 2752 aa2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 A0A0J9YY99 117 aa2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 H0YGX0 51 aa2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 UBE2D3P61077 147 aa2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 UBE2D2P62837 147 aa2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 OCIAD2Q56VL3 154 aa2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 S100A7L2Q5SY68 101 aa2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 NHP2Q9NX24 153 aaKnown RBP2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.28□□□□□ -2.04
NUDCD1-202ENST00000427660 TRGV4A0A0C4DH28 118 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 IBA57-AS1B1ANH7 110 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 H3BUT2 72 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 TRACP01848 142 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 TMEM258P61165 79 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 MEIG1Q5JSS6 88 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 Q6ZTI0 123 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 PPDPFLQ8WWR9 84 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 PRO0255Q9UI72 69 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 CNOT1A5YKK6 2376 aaKnown RBP2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 CR1P17927 2039 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 EP300Q09472 2414 aaPredicted RBP2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 TRGV2A0A075B6R0 118 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 IGHV3-30P01768 117 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 IGHV3-30-5P0DP03 117 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 TEN1Q86WV5 123 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 RPL39LQ96EH5 51 aaKnown RBP2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 VPS25Q9BRG1 176 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 LAMTOR3Q9UHA4 124 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 NDUFA12Q9UI09 145 aa2.27□□□□□ -2.05
NUDCD1-202ENST00000427660 CEP250Q9BV73 2442 aa2.26□□□□□ -2.05
NUDCD1-202ENST00000427660 TTC28Q96AY4 2481 aa2.26□□□□□ -2.05
NUDCD1-202ENST00000427660 UNC80Q8N2C7 3258 aa2.26□□□□□ -2.05
NUDCD1-202ENST00000427660 TRIOO75962 3097 aa2.26□□□□□ -2.05
NUDCD1-202ENST00000427660 TRGV1A0A0A0MS02 117 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms