RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 MIR7-3HGQ8N6C7 128 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 SPATA3Q8NHX4 192 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 RPL36ALQ969Q0 106 aaKnown RBP2.17□□□□□ -2.06
CUL3-204ENST00000409777 CCL19Q99731 98 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 TMEM243Q9BU79 118 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 SND1-IT1Q9HBX3 110 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 GAGE2AQ6NT46 116 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 C18orf65Q6ZTR6 163 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 ESM1Q9NQ30 184 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 TEP1Q99973 2627 aaKnown RBP2.17□□□□□ -2.06
CUL3-204ENST00000409777 LOC107984640A0A0U1RRK4 108 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 A0A1B0GUV1 79 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 C9orf66Q5T8R8 295 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 Q8IZM0 81 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 TMEM86BQ8N661 226 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 MUC7Q8TAX7 377 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 Q9HAA7 133 aa2.17□□□□□ -2.06
CUL3-204ENST00000409777 EP300Q09472 2414 aaPredicted RBP2.16□□□□□ -2.06
CUL3-204ENST00000409777 AKAP9Q99996 3911 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 hADV29S1A0JD25 119 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 JMJD7-PLA2G4BH0Y9G9 81 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 COX17Q14061 63 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 KIAA0087Q14695 138 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 S100A7L2Q5SY68 101 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 Q6ZTI0 123 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 Q8N814 137 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 C16orf74Q96GX8 76 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 C14orf132Q9NPU4 83 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 CNOT1A5YKK6 2376 aaKnown RBP2.16□□□□□ -2.06
CUL3-204ENST00000409777 PCNX1Q96RV3 2341 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 MED13LQ71F56 2210 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 TRBV6-8A0A0A6YYG3 113 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 DNAL4O96015 105 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 FHL2Q14192 279 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 C6orf223Q8N319 242 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 C3orf56Q8N813 242 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 ORMDL1Q9P0S3 153 aa2.16□□□□□ -2.06
CUL3-204ENST00000409777 IGLV4-60A0A075B6I1 120 aa2.15□□□□□ -2.06
CUL3-204ENST00000409777 TRAV13-1A0A0B4J241 112 aa2.15□□□□□ -2.06
CUL3-204ENST00000409777 LINC00959A0A1B0GUT2 108 aa2.15□□□□□ -2.06
CUL3-204ENST00000409777 CMC4P56277 68 aaPredicted RBP2.15□□□□□ -2.06
CUL3-204ENST00000409777 Q6ZQT0 140 aa2.15□□□□□ -2.06
CUL3-204ENST00000409777 PRR26Q8N8Z3 221 aa2.15□□□□□ -2.06
CUL3-204ENST00000409777 GVINP1Q7Z2Y8 2422 aa2.15□□□□□ -2.06
CUL3-204ENST00000409777 CACNA1HO95180 2353 aa2.15□□□□□ -2.06
CUL3-204ENST00000409777 PTPRQQ9UMZ3 2332 aa2.15□□□□□ -2.06
CUL3-204ENST00000409777 H3BQ85 93 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 LECT2O14960 151 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 IGHV4-31P0DP07 118 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 GNLYP22749 145 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 KLKP1Q107X0 134 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 C6orf226Q5I0X4 101 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 OR13C6PQ8NH95 151 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 KIR2DL5BQ8NHK3 375 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 SVEP1Q4LDE5 3571 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 TRGV1A0A0A0MS02 117 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 TMEM256-PLSCR3K7ERE1 68 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 NCR3O14931 201 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 DOPEY1Q5JWR5 2465 aa2.15□□□□□ -2.07
CUL3-204ENST00000409777 TLN1Q9Y490 2541 aaKnown RBP2.14□□□□□ -2.07
CUL3-204ENST00000409777 SPTBN1Q01082 2364 aaKnown RBP2.14□□□□□ -2.07
CUL3-204ENST00000409777 A0A087WVE0 104 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 H7BZZ5 65 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 CXCL6P80162 114 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 DEFB136Q30KP8 78 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 LINC00575Q6W349 94 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 Q8NDZ9 215 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 CELA1Q9UNI1 258 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 WNK2Q9Y3S1 2297 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 GVQW2A0A096LPI5 108 aaPredicted RBP2.14□□□□□ -2.07
CUL3-204ENST00000409777 IGKV3D-7A0A0C4DH55 119 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 TRBV7-6A0A0J9YX20 115 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 KRTAP9-7A8MTY7 169 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 ERC2-IT1O76042 136 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 IGLV6-57P01721 117 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 C16orf95Q9H693 158 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 XCL2Q9UBD3 114 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 FBN2P35556 2912 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 ITPR1Q14643 2758 aa2.14□□□□□ -2.07
CUL3-204ENST00000409777 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.13□□□□□ -2.077e-7■■■■■ 31.8
CUL3-204ENST00000409777 A0A0J9YWU9 116 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 UBE2L6O14933 153 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 IGLV1-51P01701 117 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 IGHV4-30-4P0DP06 118 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 KRTAP9-3Q9BYQ3 159 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 ACACAQ13085 2346 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 PTPN13Q12923 2485 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 TPRP12270 2363 aaKnown RBP2.13□□□□□ -2.07
CUL3-204ENST00000409777 TRBV7-4A0A0J9YYF1 115 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 HTN1P15515 57 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 PDE6GP18545 87 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 LINC00158P58513 81 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 SEC61BP60468 96 aaKnown RBP2.13□□□□□ -2.07
CUL3-204ENST00000409777 DYNLRB2Q8TF09 96 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 NOP10Q9NPE3 64 aaKnown RBP2.13□□□□□ -2.07
CUL3-204ENST00000409777 SERP1Q9Y6X1 66 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 ANK3Q12955 4377 aaKnown RBP2.13□□□□□ -2.07
CUL3-204ENST00000409777 SLPIP03973 132 aa2.13□□□□□ -2.07
CUL3-204ENST00000409777 XCL1P47992 114 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms