RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 LINC00846Q9NV44 126 aa4.15□□□□□ -1.75
CDKAL1-201ENST00000274695 SYNJ2BPP57105 145 aa4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 KLKP1Q107X0 134 aa4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 PRR4Q16378 134 aa4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 C9orf153Q5TBE3 101 aa4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 LOC107984640A0A0U1RRK4 108 aa4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 RPL36AP83881 106 aaKnown RBP4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 C10orf99Q6UWK7 81 aa4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 C16orf74Q96GX8 76 aa4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 ABCA4P78363 2273 aa4.14□□□□□ -1.75
CDKAL1-201ENST00000274695 TRBV7-6A0A0J9YX20 115 aa4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 CRPP02741 224 aa4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 CCL19Q99731 98 aa4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 GVQW2A0A096LPI5 108 aaPredicted RBP4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 KNCNA6PVL3 124 aa4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 H7C2G1 150 aa4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 DEFB131AP59861 70 aa4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 TMEM243Q9BU79 118 aa4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 C16orf95Q9H693 158 aa4.13□□□□□ -1.75
CDKAL1-201ENST00000274695 LY6EQ16553 131 aa4.12□□□□□ -1.75
CDKAL1-201ENST00000274695 SND1-IT1Q9HBX3 110 aa4.12□□□□□ -1.75
CDKAL1-201ENST00000274695 CEP250Q9BV73 2442 aa4.12□□□□□ -1.75
CDKAL1-201ENST00000274695 TRBV6-8A0A0A6YYG3 113 aa4.12□□□□□ -1.75
CDKAL1-201ENST00000274695 PKDREJQ9NTG1 2253 aa4.12□□□□□ -1.75
CDKAL1-201ENST00000274695 hADV29S1A0JD25 119 aa4.12□□□□□ -1.75
CDKAL1-201ENST00000274695 RNASE13Q5GAN3 156 aaKnown RBP4.12□□□□□ -1.75
CDKAL1-201ENST00000274695 MIR7-3HGQ8N6C7 128 aa4.12□□□□□ -1.75
CDKAL1-201ENST00000274695 Q8N814 137 aa4.12□□□□□ -1.75
CDKAL1-201ENST00000274695 EP300Q09472 2414 aaPredicted RBP4.11□□□□□ -1.75
CDKAL1-201ENST00000274695 LCE6AA0A183 80 aa4.11□□□□□ -1.75
CDKAL1-201ENST00000274695 FAM236DA0A1B0GTK5 79 aa4.11□□□□□ -1.75
CDKAL1-201ENST00000274695 TMEM256-PLSCR3K7ERE1 68 aa4.11□□□□□ -1.75
CDKAL1-201ENST00000274695 FAM236CP0DP71 79 aa4.11□□□□□ -1.75
CDKAL1-201ENST00000274695 Q6ZQT0 140 aa4.11□□□□□ -1.75
CDKAL1-201ENST00000274695 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
CDKAL1-201ENST00000274695 KRTAP1-3Q8IUG1 177 aa4.11□□□□□ -1.75
CDKAL1-201ENST00000274695 IGLV6-57P01721 117 aa4.1□□□□□ -1.75
CDKAL1-201ENST00000274695 ORMDL1Q9P0S3 153 aa4.1□□□□□ -1.75
CDKAL1-201ENST00000274695 DNAH3Q8TD57 4116 aa4.1□□□□□ -1.75
CDKAL1-201ENST00000274695 A0A0J9YWU9 116 aa4.1□□□□□ -1.75
CDKAL1-201ENST00000274695 PSPHP1O15172 72 aa4.1□□□□□ -1.75
CDKAL1-201ENST00000274695 IGKV3-20P01619 116 aa4.1□□□□□ -1.75
CDKAL1-201ENST00000274695 PDE6GP18545 87 aa4.1□□□□□ -1.75
CDKAL1-201ENST00000274695 IGHV6-1A0A0B4J1U7 121 aa4.1□□□□□ -1.75
CDKAL1-201ENST00000274695 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
CDKAL1-201ENST00000274695 TRBV7-4A0A0J9YYF1 115 aa4.09□□□□□ -1.76
CDKAL1-201ENST00000274695 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.76
CDKAL1-201ENST00000274695 PMAIP1Q13794 54 aa4.09□□□□□ -1.76
CDKAL1-201ENST00000274695 NCOR1O75376 2440 aa4.09□□□□□ -1.76
CDKAL1-201ENST00000274695 TRAV7A0A075B6U4 112 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 IGHV3-73A0A0B4J1V6 119 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 A0A1B0GW54 56 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 H7BZZ5 65 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 DNAL4O96015 105 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 IGLV1-51P01701 117 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 LINC00575Q6W349 94 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 OR13C6PQ8NH95 151 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 IGLV4-60A0A075B6I1 120 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 Q6ZTI0 123 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 C18orf65Q6ZTR6 163 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 IGLV8-61A0A075B6I0 122 aa4.08□□□□□ -1.76
CDKAL1-201ENST00000274695 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.08□□□□□ -1.764e-9■■■■■ 33.4
CDKAL1-201ENST00000274695 IGKV3-7A0A075B6H7 116 aa4.07□□□□□ -1.76
CDKAL1-201ENST00000274695 NPC2P61916 151 aa4.07□□□□□ -1.76
CDKAL1-201ENST00000274695 DEFB104AQ8WTQ1 72 aa4.07□□□□□ -1.76
CDKAL1-201ENST00000274695 C14orf132Q9NPU4 83 aa4.07□□□□□ -1.76
CDKAL1-201ENST00000274695 ITPR1Q14643 2758 aa4.07□□□□□ -1.76
CDKAL1-201ENST00000274695 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
CDKAL1-201ENST00000274695 PAX4O43316 350 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 NDUFC1O43677 76 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 Q8N3U1 123 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 ASH1LQ9NR48 2969 aaKnown RBP4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 PRR34Q9NV39 138 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 PRM2P04554 102 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 Q6ZRU5 148 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 LECT2O14960 151 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 KRTAP10-2P60368 255 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 Q8NDZ9 215 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 ZNF706Q9Y5V0 76 aaPredicted RBP4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 PTPRQQ9UMZ3 2332 aa4.06□□□□□ -1.76
CDKAL1-201ENST00000274695 A0A0U1RQV1 116 aa4.05□□□□□ -1.76
CDKAL1-201ENST00000274695 C7orf33Q8WU49 177 aa4.05□□□□□ -1.76
CDKAL1-201ENST00000274695 TRAV13-1A0A0B4J241 112 aa4.04□□□□□ -1.76
CDKAL1-201ENST00000274695 MED13LQ71F56 2210 aa4.04□□□□□ -1.76
CDKAL1-201ENST00000274695 TRGV1A0A0A0MS02 117 aa4.04□□□□□ -1.76
CDKAL1-201ENST00000274695 NCR3O14931 201 aa4.04□□□□□ -1.76
CDKAL1-201ENST00000274695 CRYBG3Q68DQ2 2970 aa4.04□□□□□ -1.76
CDKAL1-201ENST00000274695 UBE2L6O14933 153 aa4.04□□□□□ -1.76
CDKAL1-201ENST00000274695 ANK2Q01484 3957 aa4.04□□□□□ -1.76
CDKAL1-201ENST00000274695 XCL1P47992 114 aa4.03□□□□□ -1.76
CDKAL1-201ENST00000274695 ZNF469Q96JG9 3925 aaPredicted RBP4.03□□□□□ -1.76
CDKAL1-201ENST00000274695 FBN2P35556 2912 aa4.03□□□□□ -1.76
CDKAL1-201ENST00000274695 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.03□□□□□ -1.76
CDKAL1-201ENST00000274695 CELSR2Q9HCU4 2923 aa4.03□□□□□ -1.76
CDKAL1-201ENST00000274695 ELOF1P60002 83 aaKnown RBP4.03□□□□□ -1.77
CDKAL1-201ENST00000274695 CASC10Q5T4H9 136 aa4.03□□□□□ -1.77
CDKAL1-201ENST00000274695 KRTAP26-1Q6PEX3 210 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms