RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 MARF1Q9Y4F3 1742 aaKnown RBP0.65□□□□□ -2.31
GYPA-204ENST00000504786 MGPP08493 103 aa0.65□□□□□ -2.31
GYPA-204ENST00000504786 UBE2D3P61077 147 aa0.65□□□□□ -2.31
GYPA-204ENST00000504786 UBE2D2P62837 147 aa0.65□□□□□ -2.31
GYPA-204ENST00000504786 VAMP8Q9BV40 100 aa0.65□□□□□ -2.31
GYPA-204ENST00000504786 CACNA1HO95180 2353 aa0.65□□□□□ -2.31
GYPA-204ENST00000504786 MYH4Q9Y623 1939 aa0.65□□□□□ -2.31
GYPA-204ENST00000504786 CCDC88BA6NC98 1476 aa0.65□□□□□ -2.31
GYPA-204ENST00000504786 CCDC141Q6ZP82 1450 aa0.65□□□□□ -2.31
GYPA-204ENST00000504786 MYOM1P52179 1685 aa0.65□□□□□ -2.31
GYPA-204ENST00000504786 UACAQ9BZF9 1416 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 TTC28Q96AY4 2481 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 SMIM31A0A1B0GVY4 71 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 hADV29S1A0JD25 119 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 MT-ATP8P03928 68 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 SEC11AP67812 179 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 FAM223AQ8IWN6 122 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 CNFNQ9BYD5 112 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 PRO1933Q9H354 126 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 ERVK-7P63135 1459 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 TET3O43151 1660 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 KDM3BQ7LBC6 1761 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 SUPT6HQ7KZ85 1726 aaKnown RBP0.64□□□□□ -2.31
GYPA-204ENST00000504786 MON2Q7Z3U7 1717 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 ARHGEF12Q9NZN5 1544 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 ABCC5O15440 1437 aa0.64□□□□□ -2.31
GYPA-204ENST00000504786 ZC3H13Q5T200 1668 aaKnown RBP0.63□□□□□ -2.31
GYPA-204ENST00000504786 ADAMTS12P58397 1594 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 ERCC6L2Q5T890 1561 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 THOC2Q8NI27 1593 aaKnown RBP0.63□□□□□ -2.31
GYPA-204ENST00000504786 PLEKHH2Q8IVE3 1493 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 K7EP34 96 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 M0R3E3 92 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 BCE1O60756 84 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 GYPAP02724 150 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 ASIPP42127 132 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 PRO0255Q9UI72 69 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 PLXNB2O15031 1838 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 MAP3K4Q9Y6R4 1608 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 PRDM15P57071 1507 aaPredicted RBP0.63□□□□□ -2.31
GYPA-204ENST00000504786 CLIP1P30622 1438 aa0.63□□□□□ -2.31
GYPA-204ENST00000504786 LTN1O94822 1766 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 PPRC1Q5VV67 1664 aaKnown RBP0.62□□□□□ -2.31
GYPA-204ENST00000504786 DIP2BQ9P265 1576 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 FANCAO15360 1455 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 POLA1P09884 1462 aaPredicted RBP0.62□□□□□ -2.31
GYPA-204ENST00000504786 TRBV7-7A0A0K0K1E9 115 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 ATOX1O00244 68 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 GNGT2O14610 69 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 PEA15Q15121 130 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 TDRG1Q3Y452 100 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 S100A13Q99584 98 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 RABAC1Q9UI14 185 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 SPCS1Q9Y6A9 102 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 LRP6O75581 1613 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 PTPN23Q9H3S7 1636 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 ASXL3Q9C0F0 2248 aa0.62□□□□□ -2.31
GYPA-204ENST00000504786 CLTCQ00610 1675 aaKnown RBP0.62□□□□□ -2.31
GYPA-204ENST00000504786 BTAF1O14981 1849 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 NCOA2Q15596 1464 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 SHANK2Q9UPX8 1470 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 KNDC1Q76NI1 1749 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 UBR1Q8IWV7 1749 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 PDCD11Q14690 1871 aaKnown RBP0.61□□□□□ -2.31
GYPA-204ENST00000504786 KIF14Q15058 1648 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 MYO3AQ8NEV4 1616 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 PLIN4Q96Q06 1357 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 RGPD8O14715 1765 aaPredicted RBP0.61□□□□□ -2.31
GYPA-204ENST00000504786 RGPD2P0DJD1 1756 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 RGPD5Q99666 1765 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 SCN11AQ9UI33 1791 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 EPRSP07814 1512 aaKnown RBP0.61□□□□□ -2.31
GYPA-204ENST00000504786 HMGXB3Q12766 1538 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 CYB5AP00167 134 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 ALKAL2Q6UX46 152 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 ZNF720Q7Z2F6 126 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 SERP2Q8N6R1 65 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 TRGV9Q99603 122 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 PMCHL2Q9BQD1 86 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 C20orf78Q9BR46 151 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 CACNA1EQ15878 2313 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 ABCA8O94911 1581 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 ARHGEF5Q12774 1597 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 CFAP74Q9C0B2 1584 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 ATP10BO94823 1461 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 NRXN1Q9ULB1 1477 aa0.61□□□□□ -2.31
GYPA-204ENST00000504786 COL4A6Q14031 1691 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 NDUFC1O43677 76 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 Q5BKY6 102 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 S100A16Q96FQ6 103 aaKnown RBP0.6□□□□□ -2.31
GYPA-204ENST00000504786 ST20Q9HBF5 79 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 SMCO4Q9NRQ5 59 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 CACFD1Q9UGQ2 172 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 INO80Q9ULG1 1556 aaPredicted RBP0.6□□□□□ -2.31
GYPA-204ENST00000504786 IQSEC2Q5JU85 1478 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 MLH3Q9UHC1 1453 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 IQGAP3Q86VI3 1631 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 ARFGEF2Q9Y6D5 1785 aa0.6□□□□□ -2.31
GYPA-204ENST00000504786 MAGI3Q5TCQ9 1506 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms