RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 PTPRQQ9UMZ3 2332 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 TNRC18O15417 2968 aaPredicted RBP2.67□□□□□ -1.98
SRRM1-215ENST00000488317 ABCA2Q9BZC7 2435 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 IGHV3OR16-8A0A075B7F1 116 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 TRAV26-2A0A0B4J265 109 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 TRBV6-5A0A0K0K1A5 114 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 TRBV27A0A0K0K1C4 114 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 IGIPA6NJ69 53 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 C16orf90A8MZG2 172 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 H3BUA1 57 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 LEPROTO15243 131 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 TCL1BO95988 128 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 IGHV3-30P01768 117 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 MT-ATP8P03928 68 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 IGHV3-30-5P0DP03 117 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 LGALS3P17931 250 aaKnown RBP2.67□□□□□ -1.98
SRRM1-215ENST00000488317 S100A4P26447 101 aaKnown RBP2.67□□□□□ -1.98
SRRM1-215ENST00000488317 SPINT4Q6UDR6 99 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 ANKRD29Q8N6D5 301 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 TEX29Q8N6K0 151 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 ZFAND2AQ8N6M9 145 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 CARD19Q96LW7 228 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 ODF3Q96PU9 254 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 LINC01587Q99440 93 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 PHLDA3Q9Y5J5 127 aa2.67□□□□□ -1.98
SRRM1-215ENST00000488317 ZNF292O60281 2723 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 TRBV30A0A0K0K1B3 111 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 H3BT86 120 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 J3QQQ9 107 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 M0R2P5 195 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 NDUFA4O00483 81 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 RTL8CO15255 209 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 SLC25A20O43772 301 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 SNCGO76070 127 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 IGHV3-33P01772 117 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 MGPP08493 103 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 POLR2KP53803 58 aaKnown RBP2.66□□□□□ -1.98
SRRM1-215ENST00000488317 ATXN8Q156A1 80 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 DEFB124Q8NES8 71 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 AMELXQ99217 191 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 TP53TG1Q9Y2A0 90 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 TTC28Q96AY4 2481 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 ZZEF1O43149 2961 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 DOPEY2Q9Y3R5 2298 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 HIVEP3Q5T1R4 2406 aa2.66□□□□□ -1.98
SRRM1-215ENST00000488317 USP34Q70CQ2 3546 aa2.65□□□□□ -1.98
SRRM1-215ENST00000488317 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.65□□□□□ -1.981e-10■■■□□ 16.2
SRRM1-215ENST00000488317 RIF1Q5UIP0 2472 aaKnown RBP2.65□□□□□ -1.98
SRRM1-215ENST00000488317 TRAV8-3A0A0A6YYJ7 113 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 TRBV10-2A0A0K0K1G8 114 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 C9JAW5 83 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 H3BMM0 161 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 TIMM17BO60830 172 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 CRYGDP07320 174 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 RNASE3P12724 160 aaKnown RBP2.65□□□□□ -1.99
SRRM1-215ENST00000488317 RNASE4P34096 147 aaKnown RBP2.65□□□□□ -1.99
SRRM1-215ENST00000488317 DEFB121Q5J5C9 76 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 KPRPQ5T749 579 aaPredicted RBP2.65□□□□□ -1.99
SRRM1-215ENST00000488317 PRR9Q5T870 116 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 GPHB5Q86YW7 130 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 TMEM263Q8WUH6 116 aaKnown RBP2.65□□□□□ -1.99
SRRM1-215ENST00000488317 UBE2WQ96B02 151 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 RPL39LQ96EH5 51 aaKnown RBP2.65□□□□□ -1.99
SRRM1-215ENST00000488317 USMG5Q96IX5 58 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 SPANXCQ9NY87 97 aa2.65□□□□□ -1.99
SRRM1-215ENST00000488317 SPTBN5Q9NRC6 3674 aaKnown RBP2.65□□□□□ -1.99
SRRM1-215ENST00000488317 TRAV41A0A0B4J266 112 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 TRBV7-7A0A0K0K1E9 115 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 LYNX1G3V0Z9 82 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 K7ERS5 55 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 ATP5G1P05496 136 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 COX6CP09669 75 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 LYNX1P0DP58 116 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 IFITM1P13164 125 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 ZNF22P17026 224 aaPredicted RBP2.64□□□□□ -1.99
SRRM1-215ENST00000488317 TSPEAR-AS2P59090 65 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 TMEM170BQ5T4T1 132 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 C5orf56Q8N8D9 126 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 PTH2Q96A98 100 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 IMUPQ9GZP8 106 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 SPTAN1Q13813 2472 aaKnown RBP2.64□□□□□ -1.99
SRRM1-215ENST00000488317 KALRNO60229 2985 aa2.64□□□□□ -1.99
SRRM1-215ENST00000488317 HRNRQ86YZ3 2850 aaPredicted RBP2.63□□□□□ -1.99
SRRM1-215ENST00000488317 TACC2O95359 2948 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 NPFFO15130 113 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 ACYP1P07311 99 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 PRB4P10163 310 aaPredicted RBP2.63□□□□□ -1.99
SRRM1-215ENST00000488317 PRB3Q04118 309 aaPredicted RBP2.63□□□□□ -1.99
SRRM1-215ENST00000488317 MIAQ16674 131 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 KRTAP13-2Q52LG2 175 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 DEFB123Q8N688 67 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 ZNRF2Q8NHG8 242 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 COPS9Q8WXC6 57 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 TMEM126AQ9H061 195 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 ICOSQ9Y6W8 199 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 NBASA2RRP1 2371 aa2.63□□□□□ -1.99
SRRM1-215ENST00000488317 TRAV2A0A0B4J234 112 aa2.62□□□□□ -1.99
SRRM1-215ENST00000488317 G3V318 75 aa2.62□□□□□ -1.99
SRRM1-215ENST00000488317 I3L3M4 83 aa2.62□□□□□ -1.99
SRRM1-215ENST00000488317 M0QY20 66 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms