RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Olfr1419Q7TQS2 343 aa5.62□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Rbfox3Q8BIF2 374 aa5.62□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Ighv7-2A0A0A6YX91 119 aa5.62□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Zfp950A0A0U1RQ46 609 aa5.62□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm27021M0QWE2 156 aa5.62□□□□□ -1.51
Scn8a-205ENSMUST00000108910 KncnQ307W7 124 aa5.62□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Mrpl16Q99N93 251 aa5.62□□□□□ -1.51
Scn8a-205ENSMUST00000108910 FasnP19096 2504 aaKnown RBP5.62□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Trav6n-5A0A075B621 112 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Trav6-5A0A075B6B5 112 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Igh-3P01867 404 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 YrdcQ3U5F4 280 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm10645Q3UPY1 145 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Tmprss12Q3V0Q7 336 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 MturnQ8CGA4 131 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 RetnQ99P87 114 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Brca1P48754 1812 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Ascl2O35885 263 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Zfp72Q0VFY0 435 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Cela3bQ9CQ52 269 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Q9D727 114 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 6430628N08RikA0A0U1RQ45 177 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Pate4Q09098 99 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Cd200r1Q9ES57 326 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 HilpdaQ9JLS0 64 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm21974F6W3F3 119 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Prr23a3Q9CWP9 254 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm17660B9UIU9 90 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Iglc3P01845 104 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Tex36Q9D5N9 219 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Znf385cA2A5E6 429 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Ypel2Q65Z95 119 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Znf474Q6V5K9 347 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Derl1Q99J56 251 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Ypel1Q9ESC7 118 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Dkk2Q9QYZ8 259 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 TrrapQ80YV3 2565 aaKnown RBP5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Itgb1bp1O35671 200 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Klk1b22P15948 259 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 MpzP27573 248 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 SeleQ00690 612 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Sh3bgrl3Q91VW3 93 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Opn3Q9WUK7 400 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Tnrc6aQ3UHK8 1896 aaKnown RBP5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm13030A2APQ6 143 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Trbv1A0A0B4J1G7 116 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm35549A0A0N4SUS7 141 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Ly6lH3BJG9 140 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm9944Q8C559 102 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Tmem91Q8C581 172 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Olfr1323Q8VF35 309 aa5.61□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Trav21-dv12A0A075B6C4 109 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Tmem29A2ANF5 204 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Dnase2P56542 353 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Cacng7P62956 275 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Olfr523Q8VFE7 317 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Rnase6Q9D244 153 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Igkv6-14A0A140T8P1 115 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Mcrip2Q9CQB2 160 aaKnown RBP5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 C1ql4Q4ZJM9 238 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Hs3st6Q5GFD5 342 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 EtdQ80SW5 59 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm17334Q8C6U3 126 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Vmn1r216Q8R257 298 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Zdhhc16Q9ESG8 361 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Trdv2-1A0A0G2JGB9 116 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm42517A0A1Y7VLQ2 374 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 PpyP10601 100 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Ccl3P10855 92 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Col9a1Q05722 921 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Carhsp1Q9CR86 148 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Zfpl1Q9DB43 310 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Egr1P08046 533 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 AdipoqQ60994 247 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 LgalslbQ7TPX9 165 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Znf319Q9ERR8 581 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm20878L7N244 103 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Hist1h2bmP10854 126 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Hist1h2bhQ64478 126 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Hist2h2bbQ64525 126 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Hist1h2bcQ6ZWY9 126 aaKnown RBP5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Mrpl36Q99N90 102 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm4792Q569Q2 183 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Olfr33Q8VGX7 318 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Trav6-1A0A075B5Z8 112 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm20219A0A1B0GRQ3 87 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Zcchc24B2RVL6 241 aaKnown RBP5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 P01723 117 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Dynlt3P56387 116 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 PcolceQ61398 468 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Gm20854Q62461 227 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Prss58Q8BW11 241 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 P01638 115 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Znf329Q6GQR8 522 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Vmn1r54Q9EPB8 315 aa5.6□□□□□ -1.51
Scn8a-205ENSMUST00000108910 DdtO35215 118 aa5.59□□□□□ -1.51
Scn8a-205ENSMUST00000108910 ChodlQ9CXM0 273 aa5.59□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Umad1E0CX23 159 aa5.59□□□□□ -1.51
Scn8a-205ENSMUST00000108910 Smlr1J3QMJ4 66 aa5.59□□□□□ -1.51
Scn8a-205ENSMUST00000108910 SostQ99P68 211 aa5.59□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 88.4 ms