RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 Q6ZTI0 123 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 CLPSL2Q6UWE3 100 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 LST1O00453 97 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 NDUFB1O75438 58 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 ANGP03950 147 aaKnown RBP4.24□□□□□ -1.73
VPS50-220ENST00000544910 MIR7-3HGQ8N6C7 128 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 RMI2Q96E14 147 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 Q9HAA7 133 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 TNCP24821 2201 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 NDUFA1O15239 70 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 TIRAPP58753 221 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 Q6JHZ5 121 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
VPS50-220ENST00000544910 OTOGLQ3ZCN5 2332 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 C5orf38Q86SI9 138 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 DIRC1Q969H9 104 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 ARFGEF3Q5TH69 2177 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 FAM222AQ5U5X8 452 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 POM121L12Q8N7R1 296 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 SPTSSBQ8NFR3 76 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 INSL3P51460 131 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 UBE2BP63146 152 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 ENHOQ6UWT2 76 aa4.23□□□□□ -1.73
VPS50-220ENST00000544910 ETDCA0A1B0GVM5 59 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 BPY2O14599 106 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 KIF25-AS1Q9Y6Z4 181 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 CNOT1A5YKK6 2376 aaKnown RBP4.22□□□□□ -1.73
VPS50-220ENST00000544910 UBE2D1P51668 147 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 LINC00308Q8TCZ7 52 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 TSPEAR-AS2P59090 65 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 CDH23Q9H251 3354 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 NDUFS5O43920 106 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 PRM2P04554 102 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 DEFB105AQ8NG35 78 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 CHCHD7Q9BUK0 85 aa4.22□□□□□ -1.73
VPS50-220ENST00000544910 PSCAO43653 123 aa4.21□□□□□ -1.73
VPS50-220ENST00000544910 CSDC2Q9Y534 153 aaKnown RBP4.21□□□□□ -1.73
VPS50-220ENST00000544910 PLCE1Q9P212 2302 aa4.21□□□□□ -1.74
VPS50-220ENST00000544910 NAV3Q8IVL0 2385 aa4.21□□□□□ -1.74
VPS50-220ENST00000544910 TRBV6-4A0A1B0GX49 114 aa4.21□□□□□ -1.74
VPS50-220ENST00000544910 HRCT1Q6UXD1 115 aa4.21□□□□□ -1.74
VPS50-220ENST00000544910 FAM19A5Q7Z5A7 132 aaPredicted RBP4.21□□□□□ -1.74
VPS50-220ENST00000544910 COX7BP24311 80 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 KRTAP10-9P60411 292 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 ROS1P08922 2347 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 SPTBN5Q9NRC6 3674 aaKnown RBP4.2□□□□□ -1.74
VPS50-220ENST00000544910 PLXNB1O43157 2135 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 A8MZ25 164 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 IBA57-AS1B1ANH7 110 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 LINC00315P59091 139 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 UBE2D3P61077 147 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 UBE2D2P62837 147 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 Q8N2B8 174 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 AMELXQ99217 191 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 IGHV4-28A0A0C4DH34 117 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 NCR3O14931 201 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 ARHGAP32A7KAX9 2087 aa4.2□□□□□ -1.74
VPS50-220ENST00000544910 ZFHX2Q9C0A1 2572 aaPredicted RBP4.19□□□□□ -1.74
VPS50-220ENST00000544910 TRAV7A0A075B6U4 112 aa4.19□□□□□ -1.74
VPS50-220ENST00000544910 UBE2DNLQ8IWF7 75 aa4.19□□□□□ -1.74
VPS50-220ENST00000544910 CAMK2N2Q96S95 79 aa4.19□□□□□ -1.74
VPS50-220ENST00000544910 ACACAQ13085 2346 aa4.19□□□□□ -1.74
VPS50-220ENST00000544910 FAM19A3Q7Z5A8 133 aa4.19□□□□□ -1.74
VPS50-220ENST00000544910 LINC01006Q8NI28 216 aa4.19□□□□□ -1.74
VPS50-220ENST00000544910 SPART-AS1P0CW21 52 aa4.19□□□□□ -1.74
VPS50-220ENST00000544910 ODF3L2Q3SX64 289 aa4.19□□□□□ -1.74
VPS50-220ENST00000544910 PRO0255Q9UI72 69 aa4.19□□□□□ -1.74
VPS50-220ENST00000544910 TRBV6-8A0A0A6YYG3 113 aa4.18□□□□□ -1.74
VPS50-220ENST00000544910 BEAN1Q3B7T3 259 aa4.18□□□□□ -1.74
VPS50-220ENST00000544910 Q6ZSN1 163 aa4.18□□□□□ -1.74
VPS50-220ENST00000544910 DEFB135Q30KP9 77 aa4.18□□□□□ -1.74
VPS50-220ENST00000544910 APC2O95996 2303 aa4.18□□□□□ -1.74
VPS50-220ENST00000544910 C16orf95Q9H693 158 aa4.18□□□□□ -1.74
VPS50-220ENST00000544910 IGLV10-54A0A075B6I4 117 aa4.18□□□□□ -1.74
VPS50-220ENST00000544910 PRB2P02812 416 aaPredicted RBP4.18□□□□□ -1.74
VPS50-220ENST00000544910 WFDC10AQ9H1F0 79 aa4.18□□□□□ -1.74
VPS50-220ENST00000544910 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
VPS50-220ENST00000544910 CACNA1HO95180 2353 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 LOC100131303A0A0U1RQF7 123 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
VPS50-220ENST00000544910 CEP250Q9BV73 2442 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 PCNX1Q96RV3 2341 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 DEFB4AO15263 64 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 PRR15LQ9BU68 103 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 ZNF318Q5VUA4 2279 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 TRBV7-7A0A0K0K1E9 115 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 MIFP14174 115 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 SEC61GP60059 68 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 COX6A2Q02221 97 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 C1orf158Q8N1D5 194 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 CDC42SE2Q9NRR3 84 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 DNAH14Q0VDD8 3507 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 UBE2AP49459 152 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 HILS1P60008 231 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 POLEQ07864 2286 aa4.17□□□□□ -1.74
VPS50-220ENST00000544910 SPAG11BQ08648 103 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms