RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 LTN1O94822 1766 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 IGKV3D-7A0A0C4DH55 119 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 IGKV3OR2-268A0A0C4DH90 116 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 UBE2L5PA0A1B0GUS4 154 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 SSSCA1O60232 199 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 MPC2O95563 127 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 RPL37AP61513 92 aaKnown RBP2.14□□□□□ -2.07
LSM5-205ENST00000409952 UBE2L3P68036 154 aaKnown RBP2.14□□□□□ -2.07
LSM5-205ENST00000409952 DCDP81605 110 aaKnown RBP2.14□□□□□ -2.07
LSM5-205ENST00000409952 C10orf82Q8WW14 230 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 PRO3102Q9H379 93 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 CTTNBP2Q8WZ74 1663 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 SPTA1P02549 2419 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 PIK3C2BO00750 1634 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 SCN11AQ9UI33 1791 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 RIF1Q5UIP0 2472 aaKnown RBP2.13□□□□□ -2.07
LSM5-205ENST00000409952 MYH9P35579 1960 aaKnown RBP2.13□□□□□ -2.07
LSM5-205ENST00000409952 IL9P15248 144 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 ATP5EP56381 51 aaPredicted RBP2.13□□□□□ -2.07
LSM5-205ENST00000409952 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 CCL8P80075 99 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 COMMD6Q7Z4G1 85 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 SNHG12Q9BXW3 62 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 CPSF1Q10570 1443 aaKnown RBP2.13□□□□□ -2.07
LSM5-205ENST00000409952 ANK1P16157 1881 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 C1orf167Q5SNV9 1468 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 PXDNQ92626 1479 aa2.13□□□□□ -2.07
LSM5-205ENST00000409952 SPG11Q96JI7 2443 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 ALS2Q96Q42 1657 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 DUOX2Q9NRD8 1548 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 HFM1A2PYH4 1435 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 WDFY4Q6ZS81 3184 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 TEX49A0A1B0GTD5 131 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 H3BQ15 152 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 FXYD4P59646 89 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 AMELYQ99218 206 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 ALPK3Q96L96 1907 aa2.12□□□□□ -2.07
LSM5-205ENST00000409952 EML5Q05BV3 1969 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 DCHS1Q96JQ0 3298 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 TRAV13-2A0A0B4J235 113 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 HCG22E2RYF7 251 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 ZNF818PQ6ZRF7 136 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 CYP2G1PQ6ZSU1 146 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 OBSCN-AS1Q96MR7 158 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 ATP7BP35670 1465 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 UNC13CQ8NB66 2214 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 FBN2P35556 2912 aa2.11□□□□□ -2.07
LSM5-205ENST00000409952 INO80Q9ULG1 1556 aaPredicted RBP2.1□□□□□ -2.07
LSM5-205ENST00000409952 NAV3Q8IVL0 2385 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 PPIP5K1Q6PFW1 1433 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 SPEGQ15772 3267 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 RP1L1Q8IWN7 2480 aaPredicted RBP2.1□□□□□ -2.07
LSM5-205ENST00000409952 NHSQ6T4R5 1651 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 PVALEFA0A1B0GWK0 134 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 SIX6O95475 246 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 TJP1Q07157 1748 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 CREBBPQ92793 2442 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 CR1P17927 2039 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 SIP14410 1827 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 LRRK2Q5S007 2527 aa2.1□□□□□ -2.07
LSM5-205ENST00000409952 PHRF1Q9P1Y6 1649 aaKnown RBP2.09□□□□□ -2.07
LSM5-205ENST00000409952 KIF1AQ12756 1690 aa2.09□□□□□ -2.07
LSM5-205ENST00000409952 GVINP1Q7Z2Y8 2422 aa2.09□□□□□ -2.07
LSM5-205ENST00000409952 TLN1Q9Y490 2541 aaKnown RBP2.09□□□□□ -2.07
LSM5-205ENST00000409952 IGKV2-40A0A087WW87 121 aaPredicted RBP2.09□□□□□ -2.07
LSM5-205ENST00000409952 RBAKDNA6NC62 111 aa2.09□□□□□ -2.07
LSM5-205ENST00000409952 IGKV2D-40P01614 121 aaPredicted RBP2.09□□□□□ -2.07
LSM5-205ENST00000409952 UBE2D1P51668 147 aa2.09□□□□□ -2.07
LSM5-205ENST00000409952 BTAF1O14981 1849 aa2.09□□□□□ -2.08
LSM5-205ENST00000409952 CDC42BPGQ6DT37 1551 aa2.09□□□□□ -2.08
LSM5-205ENST00000409952 SPTBN2O15020 2390 aa2.09□□□□□ -2.08
LSM5-205ENST00000409952 CLIP1P30622 1438 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 NOTCH1P46531 2555 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 PRXQ9BXM0 1461 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 TENM4Q6N022 2769 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 XAF1Q6GPH4 301 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 DPY30Q9C005 99 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 CYP4F30PQ9H0H9 118 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 AP4S1Q9Y587 144 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 XRN1Q8IZH2 1706 aaKnown RBP2.08□□□□□ -2.08
LSM5-205ENST00000409952 KIAA1551Q9HCM1 1747 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 MYOFQ9NZM1 2061 aa2.08□□□□□ -2.08
LSM5-205ENST00000409952 UBR5O95071 2799 aaPredicted RBP2.08□□□□□ -2.08
LSM5-205ENST00000409952 PCNX1Q96RV3 2341 aa2.07□□□□□ -2.08
LSM5-205ENST00000409952 EIF2AK4Q9P2K8 1649 aaKnown RBP2.07□□□□□ -2.08
LSM5-205ENST00000409952 NBDYA0A0U1RRE5 68 aa2.07□□□□□ -2.08
LSM5-205ENST00000409952 IGKV2-29A2NJV5 120 aaPredicted RBP2.07□□□□□ -2.08
LSM5-205ENST00000409952 LINC00032P0C843 101 aa2.07□□□□□ -2.08
LSM5-205ENST00000409952 SNCAP37840 140 aa2.07□□□□□ -2.08
LSM5-205ENST00000409952 UBA52P62987 128 aaKnown RBP2.07□□□□□ -2.08
LSM5-205ENST00000409952 FXYD3Q14802 87 aa2.07□□□□□ -2.08
LSM5-205ENST00000409952 KRTAP21-3Q3LHN1 58 aa2.07□□□□□ -2.08
LSM5-205ENST00000409952 LRRC37A2A6NM11 1700 aa2.07□□□□□ -2.08
LSM5-205ENST00000409952 XIRP2A4UGR9 3374 aa2.07□□□□□ -2.08
LSM5-205ENST00000409952 FRYQ5TBA9 3013 aa2.07□□□□□ -2.08
LSM5-205ENST00000409952 NINQ8N4C6 2090 aa2.06□□□□□ -2.08
LSM5-205ENST00000409952 SSC5DA1L4H1 1573 aa2.06□□□□□ -2.08
LSM5-205ENST00000409952 ANKRD26Q9UPS8 1709 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms