RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 COL6A5A8TX70 2615 aa0.86□□□□□ -2.27
RNU1-78P-201ENST00000391248 DIDO1Q9BTC0 2240 aaKnown RBP0.86□□□□□ -2.27
RNU1-78P-201ENST00000391248 NSD1Q96L73 2696 aaPredicted RBP0.86□□□□□ -2.27
RNU1-78P-201ENST00000391248 PLECQ15149 4684 aaKnown RBP0.86□□□□□ -2.27
RNU1-78P-201ENST00000391248 CITO14578 2027 aa0.86□□□□□ -2.27
RNU1-78P-201ENST00000391248 JMJD1CQ15652 2540 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 TLN2Q9Y4G6 2542 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 PKHD1P08F94 4074 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 IGKV2-28A0A075B6P5 120 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 TRAV10A0A0B4J240 114 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 TRAV12-1A0A0B4J245 112 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 A0A0G2JQZ4 141 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 A0A1W2PRS3 328 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 C2orf70A6NJV1 201 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 ZNF705FA8MVS1 300 aaPredicted RBP0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 ZNF736B4DX44 427 aaPredicted RBP0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 RTL8CO15255 209 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 YPEL1O60688 119 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 HYPMO75409 117 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 ERC2-IT1O76042 136 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 UBL3O95164 117 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 TNFP01375 233 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 IGKV2D-28P01615 120 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 SPINK8P0C7L1 97 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 IL7P13232 177 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 CR1P17927 2039 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 PRRC2AP48634 2157 aaKnown RBP0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 BTG2P78543 158 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 COL5A1-AS1Q5SY13 56 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 ZNF833PQ6ZTB9 187 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 FP248Q71RG6 208 aaPredicted RBP0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 C4orf33Q8N1A6 199 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 LINC00269Q8N2A0 174 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 TTC9CQ8N5M4 171 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 ATP6V0E2Q8NHE4 81 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 PSMF1Q92530 271 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 SPTSSAQ969W0 71 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 SMIM7Q9BQ49 75 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 AGPAT4-IT1Q9H0P7 198 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 RPRMQ9NS64 109 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 CCL26Q9Y258 94 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 DYNC1H1Q14204 4646 aaKnown RBP0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 CACNA1CQ13936 2221 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 KIAA1109Q2LD37 5005 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 TENM2Q9NT68 2774 aa0.85□□□□□ -2.27
RNU1-78P-201ENST00000391248 STARD9Q9P2P6 4700 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 CHD3Q12873 2000 aaKnown RBP0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 KNTC1P50748 2209 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 HUWE1Q7Z6Z7 4374 aaKnown RBP0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 DNAH2Q9P225 4427 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 TCHHQ07283 1943 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 TCRBV4S1A1TA0A5B7 111 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 RBAKDNA6NC62 111 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 SDHAF1A6NFY7 115 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 E7EQL1 145 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 SNCGO76070 127 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 PIRTP0C851 137 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 BAALC-AS2P0C853 105 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 CXCL8P10145 99 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 IFITM1P13164 125 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 MT3P25713 68 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 BRS3P32247 399 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 DSCR4P56555 118 aaPredicted RBP0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 ESPL1Q14674 2120 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 LY6EQ16553 131 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 IQCJQ1A5X6 159 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 KRTAP13-2Q52LG2 175 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 Q56UQ5 140 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 PRR9Q5T870 116 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 LINC01545Q5VT33 79 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 SLC48A1Q6P1K1 146 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 FOXI2Q6ZQN5 318 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 LYPD1Q8N2G4 141 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 Q8N8P6 123 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 PLPP5Q8NEB5 264 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 Q96M85 177 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 Q9BRP9 147 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 KRTAP1-5Q9BYS1 174 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 SAR1AQ9NR31 198 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 TMEM242Q9NWH2 141 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 ANAPC11Q9NYG5 84 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 PRO2289Q9P1D8 64 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 TP53TG3Q9ULZ0 132 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 LHFPL6Q9Y693 200 aa0.84□□□□□ -2.27
RNU1-78P-201ENST00000391248 SEC16AO15027 2179 aa0.84□□□□□ -2.28
RNU1-78P-201ENST00000391248 F5P12259 2224 aa0.84□□□□□ -2.28
RNU1-78P-201ENST00000391248 VPS13DQ5THJ4 4388 aa0.84□□□□□ -2.28
RNU1-78P-201ENST00000391248 HIVEP2P31629 2446 aa0.84□□□□□ -2.28
RNU1-78P-201ENST00000391248 PKDREJQ9NTG1 2253 aa0.84□□□□□ -2.28
RNU1-78P-201ENST00000391248 MYO7BQ6PIF6 2116 aa0.83□□□□□ -2.28
RNU1-78P-201ENST00000391248 AKAP6Q13023 2319 aa0.83□□□□□ -2.28
RNU1-78P-201ENST00000391248 HSPG2P98160 4391 aa0.83□□□□□ -2.28
RNU1-78P-201ENST00000391248 MUC4Q99102 2169 aa0.83□□□□□ -2.28
RNU1-78P-201ENST00000391248 IGKV1D-17A0A075B6S4 117 aa0.83□□□□□ -2.28
RNU1-78P-201ENST00000391248 PVALEFA0A1B0GWK0 134 aa0.83□□□□□ -2.28
RNU1-78P-201ENST00000391248 TCRBV3S1A0A5B6 114 aa0.83□□□□□ -2.28
RNU1-78P-201ENST00000391248 E7EUB6 86 aa0.83□□□□□ -2.28
RNU1-78P-201ENST00000391248 APOC4-APOC2K7ER74 178 aa0.83□□□□□ -2.28
RNU1-78P-201ENST00000391248 IGKCP01834 107 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms