RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 NDUFC1O43677 76 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 LY6HO94772 140 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 GHRHP01286 108 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 RBMY1DP0C7P1 496 aaKnown RBP3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 RBMY1A1P0DJD3 496 aaKnown RBP3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 RBMY1CP0DJD4 496 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 PFN2P35080 140 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 XCL1P47992 114 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 KLKP1Q107X0 134 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 FHL2Q14192 279 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 RBMY1FQ15415 496 aaKnown RBP3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 RNASE13Q5GAN3 156 aaKnown RBP3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 Q9HAA7 133 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 SND1-IT1Q9HBX3 110 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 XCL2Q9UBD3 114 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 SPTAN1Q13813 2472 aaKnown RBP3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 EP300Q09472 2414 aaPredicted RBP3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 LAMA1P25391 3075 aa3.55□□□□□ -1.84
TRAJ4-201ENST00000390533 GVINP1Q7Z2Y8 2422 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 IGKV3-7A0A075B6H7 116 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 A0A087WYN8 130 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 F8WDY8 70 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 H7BZZ5 65 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 TMEM256-PLSCR3K7ERE1 68 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 IGHV3-11P01762 117 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 PROK1P58294 105 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 Q6ZSN1 163 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 C11orf72Q8NBR9 251 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 TMEM243Q9BU79 118 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 CDC42SE2Q9NRR3 84 aa3.54□□□□□ -1.84
TRAJ4-201ENST00000390533 SPTA1P02549 2419 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 A0A087WVE0 104 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 TRBV6-4A0A1B0GX49 114 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 K7EQD1 137 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 PDE6GP18545 87 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 CCL18P55774 89 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 RPL36AP83881 106 aaKnown RBP3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 SS18Q15532 418 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 C9orf129Q5T035 196 aaKnown RBP3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 MIR7-3HGQ8N6C7 128 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 C11orf44Q8N8P7 122 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 COX7B2Q8TF08 81 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 RPL36ALQ969Q0 106 aaKnown RBP3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 UBL5Q9BZL1 73 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 NBEAQ8NFP9 2946 aa3.53□□□□□ -1.84
TRAJ4-201ENST00000390533 TRIOO75962 3097 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 LOC110117498A0A087WWA1 95 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 IGHV3-73A0A0B4J1V6 119 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 KNCNA6PVL3 124 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 NCR3O14931 201 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 LECT2O14960 151 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 ERC2-IT1O76042 136 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 IGHV4-38-2P0DP08 117 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 HOXD3P31249 432 aaPredicted RBP3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 C10orf105Q8TEF2 133 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 Q96MF0 132 aa3.52□□□□□ -1.85
TRAJ4-201ENST00000390533 A0A0U1RRA0 63 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 IGKV3-20P01619 116 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 GRNP28799 593 aaKnown RBP3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 LINC00158P58513 81 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 CXCL6P80162 114 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 NTM-AS1Q6ZSK4 140 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 C20orf197Q8N268 126 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 LINC00482Q8N8I6 264 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 IL17DQ8TAD2 202 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 C16orf95Q9H693 158 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 Q9UF83 564 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 CSPG4Q6UVK1 2322 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 SPEGQ15772 3267 aa3.51□□□□□ -1.85
TRAJ4-201ENST00000390533 ABCA2Q9BZC7 2435 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 A0A087WZ39 114 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 IGHV3OR16-9A0A0B4J2B5 98 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 IGHV3-38A0A0C4DH36 116 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 H3BUX3 64 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 J3QLI3 93 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 INSP01308 110 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 EDN2P20800 178 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 HILS1P60008 231 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 BLCAPP62952 87 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 ADORA2A-AS1P86434 159 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 C9orf66Q5T8R8 295 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 ENHOQ6UWT2 76 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 LINC00336Q6ZUF6 198 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 FAM19A1Q7Z5A9 133 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 TMEM86BQ8N661 226 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 Q8N814 137 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 MUC7Q8TAX7 377 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 BPESC1Q9GZL8 116 aa3.5□□□□□ -1.85
TRAJ4-201ENST00000390533 C2CD3Q4AC94 2353 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 TLN1Q9Y490 2541 aaKnown RBP3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 TRAV23DV6A0A075B6W5 121 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 CCL21O00585 134 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 PAX4O43316 350 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 DEFB131AP59861 70 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 Q6ZQT0 140 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 C6orf223Q8N319 242 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 UBE2E2Q96LR5 201 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 FRYLO94915 3013 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
TRAJ4-201ENST00000390533 NBASA2RRP1 2371 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms