RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 NISCHQ9Y2I1 1504 aa9.38□□□□□ -0.91
TRAJ4-201ENST00000390533 HRCP23327 699 aa8.43□□□□□ -1.06
TRAJ4-201ENST00000390533 PELP1Q8IZL8 1130 aaKnown RBP8.35□□□□□ -1.07
TRAJ4-201ENST00000390533 DCAF1Q9Y4B6 1507 aa8.14□□□□□ -1.11
TRAJ4-201ENST00000390533 MYT1Q01538 1121 aa8.12□□□□□ -1.11
TRAJ4-201ENST00000390533 CHIC1Q5VXU3 224 aa8.1□□□□□ -1.11
TRAJ4-201ENST00000390533 PCGF6Q9BYE7 350 aa8.07□□□□□ -1.12
TRAJ4-201ENST00000390533 MYO15BQ96JP2 1530 aa8.07□□□□□ -1.12
TRAJ4-201ENST00000390533 SUPT5HO00267 1087 aaKnown RBP8.03□□□□□ -1.12
TRAJ4-201ENST00000390533 ZEB1P37275 1124 aaPredicted RBP8.03□□□□□ -1.12
TRAJ4-201ENST00000390533 CCDC180Q9P1Z9 1646 aa8.02□□□□□ -1.13
TRAJ4-201ENST00000390533 ZCCHC6Q5VYS8 1495 aaKnown RBP8.01□□□□□ -1.13
TRAJ4-201ENST00000390533 PPARGC1BQ86YN6 1023 aaKnown RBP8.01□□□□□ -1.13
TRAJ4-201ENST00000390533 SHROOM4Q9ULL8 1493 aa8□□□□□ -1.13
TRAJ4-201ENST00000390533 TRIM26Q12899 539 aaPredicted RBP7.97□□□□□ -1.13
TRAJ4-201ENST00000390533 SCAF1Q9H7N4 1312 aaKnown RBP7.88□□□□□ -1.15
TRAJ4-201ENST00000390533 ACIN1Q9UKV3 1341 aaKnown RBP7.77□□□□□ -1.17
TRAJ4-201ENST00000390533 LOC105371045A0A1W2PR82 267 aa7.76□□□□□ -1.17
TRAJ4-201ENST00000390533 CENPBP07199 599 aaPredicted RBP7.71□□□□□ -1.18
TRAJ4-201ENST00000390533 TTBK1Q5TCY1 1321 aaPredicted RBP7.68□□□□□ -1.18
TRAJ4-201ENST00000390533 NEUROD1Q13562 356 aa7.65□□□□□ -1.18
TRAJ4-201ENST00000390533 GTF3C3Q9Y5Q9 886 aa7.61□□□□□ -1.19
TRAJ4-201ENST00000390533 ABCC9O60706 1549 aa7.6□□□□□ -1.19
TRAJ4-201ENST00000390533 DIEXFQ68CQ4 756 aaKnown RBP7.57□□□□□ -1.2
TRAJ4-201ENST00000390533 CLSPNQ9HAW4 1339 aa7.55□□□□□ -1.2
TRAJ4-201ENST00000390533 TRIM41Q8WV44 630 aa7.55□□□□□ -1.2
TRAJ4-201ENST00000390533 RB1CC1Q8TDY2 1594 aa7.53□□□□□ -1.2
TRAJ4-201ENST00000390533 RSF1Q96T23 1441 aaPredicted RBP7.52□□□□□ -1.2
TRAJ4-201ENST00000390533 CCER1Q8TC90 406 aaPredicted RBP7.5□□□□□ -1.21
TRAJ4-201ENST00000390533 WRNQ14191 1432 aaPredicted RBP eCLIP7.5□□□□□ -1.21
TRAJ4-201ENST00000390533 ZNF316A6NFI3 1004 aaPredicted RBP7.47□□□□□ -1.21
TRAJ4-201ENST00000390533 DCAF8L2P0C7V8 631 aa7.45□□□□□ -1.22
TRAJ4-201ENST00000390533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.44□□□□□ -1.22
TRAJ4-201ENST00000390533 FAM9AQ8IZU1 332 aaPredicted RBP7.36□□□□□ -1.23
TRAJ4-201ENST00000390533 ANP32EQ9BTT0 268 aa7.36□□□□□ -1.23
TRAJ4-201ENST00000390533 TNIKQ9UKE5 1360 aa7.35□□□□□ -1.23
TRAJ4-201ENST00000390533 EEA1Q15075 1411 aa7.35□□□□□ -1.23
TRAJ4-201ENST00000390533 EIF4G1Q04637 1599 aaKnown RBP7.33□□□□□ -1.24
TRAJ4-201ENST00000390533 MIER1Q8N108 512 aa7.33□□□□□ -1.24
TRAJ4-201ENST00000390533 CEP162Q5TB80 1403 aa7.31□□□□□ -1.24
TRAJ4-201ENST00000390533 BCL11AQ9H165 835 aa7.3□□□□□ -1.24
TRAJ4-201ENST00000390533 SUPT16HQ9Y5B9 1047 aaKnown RBP7.29□□□□□ -1.24
TRAJ4-201ENST00000390533 TSHZ2Q9NRE2 1034 aa7.28□□□□□ -1.24
TRAJ4-201ENST00000390533 BAZ1AQ9NRL2 1556 aaPredicted RBP7.28□□□□□ -1.24
TRAJ4-201ENST00000390533 SCRIBQ14160 1630 aa7.27□□□□□ -1.25
TRAJ4-201ENST00000390533 YTHDC1Q96MU7 727 aaKnown RBP7.26□□□□□ -1.25
TRAJ4-201ENST00000390533 MROH2BQ7Z745 1585 aa7.25□□□□□ -1.25
TRAJ4-201ENST00000390533 NACADO15069 1562 aa7.22□□□□□ -1.25
TRAJ4-201ENST00000390533 GOLGA3Q08378 1498 aa7.22□□□□□ -1.25
TRAJ4-201ENST00000390533 CECR2Q9BXF3 1484 aa7.21□□□□□ -1.26
TRAJ4-201ENST00000390533 WIZO95785 1651 aa7.2□□□□□ -1.26
TRAJ4-201ENST00000390533 CSRNP3Q8WYN3 585 aa7.2□□□□□ -1.26
TRAJ4-201ENST00000390533 CCDC88BA6NC98 1476 aa7.18□□□□□ -1.26
TRAJ4-201ENST00000390533 TOP2AP11388 1531 aaKnown RBP7.18□□□□□ -1.26
TRAJ4-201ENST00000390533 MYT1LQ9UL68 1186 aa7.18□□□□□ -1.26
TRAJ4-201ENST00000390533 KIF21BO75037 1637 aa7.17□□□□□ -1.26
TRAJ4-201ENST00000390533 EHMT2Q96KQ7 1210 aa7.17□□□□□ -1.26
TRAJ4-201ENST00000390533 VPS8Q8N3P4 1428 aa7.17□□□□□ -1.26
TRAJ4-201ENST00000390533 BAZ1BQ9UIG0 1483 aaKnown RBP7.16□□□□□ -1.26
TRAJ4-201ENST00000390533 CEP164Q9UPV0 1460 aa7.16□□□□□ -1.26
TRAJ4-201ENST00000390533 CUX2O14529 1486 aa7.14□□□□□ -1.27
TRAJ4-201ENST00000390533 SOGA1O94964 1423 aa7.14□□□□□ -1.27
TRAJ4-201ENST00000390533 ABCC8Q09428 1581 aa7.14□□□□□ -1.27
TRAJ4-201ENST00000390533 DHX57Q6P158 1386 aaKnown RBP7.14□□□□□ -1.27
TRAJ4-201ENST00000390533 UBTFP17480 764 aaKnown RBP7.12□□□□□ -1.27
TRAJ4-201ENST00000390533 SMARCA2P51531 1590 aa7.12□□□□□ -1.27
TRAJ4-201ENST00000390533 CLIP1P30622 1438 aa7.11□□□□□ -1.27
TRAJ4-201ENST00000390533 HNRNPUL2Q1KMD3 747 aaKnown RBP7.11□□□□□ -1.27
TRAJ4-201ENST00000390533 FANCIQ9NVI1 1328 aa7.1□□□□□ -1.27
TRAJ4-201ENST00000390533 RBM19Q9Y4C8 960 aaKnown RBP7.1□□□□□ -1.27
TRAJ4-201ENST00000390533 APLP2Q06481 763 aa7.09□□□□□ -1.27
TRAJ4-201ENST00000390533 RRBP1Q9P2E9 1410 aaKnown RBP7.08□□□□□ -1.28
TRAJ4-201ENST00000390533 CCER2I3L3R5 266 aa7.07□□□□□ -1.28
TRAJ4-201ENST00000390533 NEFLP07196 543 aa7.07□□□□□ -1.28
TRAJ4-201ENST00000390533 RUSC2Q8N2Y8 1516 aa7.06□□□□□ -1.28
TRAJ4-201ENST00000390533 SMARCA4P51532 1647 aa7.06□□□□□ -1.28
TRAJ4-201ENST00000390533 ERICH6BQ5W0A0 696 aa7.06□□□□□ -1.28
TRAJ4-201ENST00000390533 ERICH6Q7L0X2 663 aa7.06□□□□□ -1.28
TRAJ4-201ENST00000390533 TIMELESSQ9UNS1 1208 aa7.05□□□□□ -1.28
TRAJ4-201ENST00000390533 FKBP8Q14318 412 aa7.04□□□□□ -1.28
TRAJ4-201ENST00000390533 ERICH3Q5RHP9 1530 aa7.01□□□□□ -1.29
TRAJ4-201ENST00000390533 MSH5O43196 834 aa7□□□□□ -1.29
TRAJ4-201ENST00000390533 PRKCSHP14314 528 aaPredicted RBP7□□□□□ -1.29
TRAJ4-201ENST00000390533 PPP1R15AO75807 674 aaPredicted RBP6.99□□□□□ -1.29
TRAJ4-201ENST00000390533 PEG3Q9GZU2 1588 aa6.99□□□□□ -1.29
TRAJ4-201ENST00000390533 MAP3K1Q13233 1512 aa6.98□□□□□ -1.29
TRAJ4-201ENST00000390533 SYNJ1O43426 1573 aa6.98□□□□□ -1.29
TRAJ4-201ENST00000390533 RAPGEF2Q9Y4G8 1499 aa6.98□□□□□ -1.29
TRAJ4-201ENST00000390533 CCNB3Q8WWL7 1395 aa6.97□□□□□ -1.29
TRAJ4-201ENST00000390533 CDK11AQ9UQ88 783 aaPredicted RBP6.97□□□□□ -1.29
TRAJ4-201ENST00000390533 ARAP1Q96P48 1450 aa6.97□□□□□ -1.29
TRAJ4-201ENST00000390533 MAPKBP1O60336 1514 aa6.96□□□□□ -1.29
TRAJ4-201ENST00000390533 BCANQ96GW7 911 aa6.96□□□□□ -1.3
TRAJ4-201ENST00000390533 PRXQ9BXM0 1461 aa6.96□□□□□ -1.3
TRAJ4-201ENST00000390533 KCNH8Q96L42 1107 aa6.95□□□□□ -1.3
TRAJ4-201ENST00000390533 ANP32CO43423 234 aa6.94□□□□□ -1.3
TRAJ4-201ENST00000390533 SETD5Q9C0A6 1442 aa6.93□□□□□ -1.3
TRAJ4-201ENST00000390533 TOP2BQ02880 1626 aa6.92□□□□□ -1.3
TRAJ4-201ENST00000390533 PPP4R2Q9NY27 417 aa6.92□□□□□ -1.3
TRAJ4-201ENST00000390533 RAB3GAP2Q9H2M9 1393 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms