RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 MymxQ2Q5T5 84 aa11.71□□□□□ -0.53
Col1a1-201ENSMUST00000001547 Foxg1Q60987 481 aa11.71□□□□□ -0.53
Col1a1-201ENSMUST00000001547 Cd200r1lQ6XJV6 249 aa11.71□□□□□ -0.53
Col1a1-201ENSMUST00000001547 OtofQ9ESF1 1997 aa11.71□□□□□ -0.53
Col1a1-201ENSMUST00000001547 Tmem92B7ZWI3 162 aa11.71□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Rnf212F6TQD1 307 aa11.71□□□□□ -0.54
Col1a1-201ENSMUST00000001547 HrkP62816 92 aa11.71□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Shisa6Q3UH99 525 aa11.71□□□□□ -0.54
Col1a1-201ENSMUST00000001547 AgerQ62151 402 aa11.71□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Hcfc2Q9D968 241 aa11.71□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Trav3n-3A0A0G2JEM0 114 aa11.71□□□□□ -0.54
Col1a1-201ENSMUST00000001547 1700031F05RikB1AX30 191 aa11.71□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gm5819E9PZ96 154 aa11.71□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Trdv5A0A075B661 115 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Slamf6Q9ET39 351 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Ralgapa1Q6GYP7 2035 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 P01723 117 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Wdr31Q9JHB4 367 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Arpc1aQ9R0Q6 370 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Igkv14-126A0A075B5K0 117 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Zic3Q62521 466 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 AsmtD3KU66 387 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Igh-VJ558P01758 117 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Hs3st6Q5GFD5 342 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Nrn1Q8CFV4 142 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Slc25a15Q9WVD5 301 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Plxna3P70208 1872 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Trav7-4A0A075B6C1 113 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Pax9P47242 342 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Shisal1Q0VBP7 198 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Trav7d-4Q5R1H9 113 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Cd99Q8VCN6 175 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Olfr223Q8VF69 319 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Fam241aQ9CZL2 131 aa11.7□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gm27021M0QWE2 156 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gata2O09100 480 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Snrnp40Q6PE01 358 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Tac4Q99N14 128 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Zfp977L7N2E7 438 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Cep295Q8BQ48 2412 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Trav4-2A0A075B638 110 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Igkv4-71A0A0G2JEH0 117 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Ighv1-76A0A0G2JFE9 117 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 6430628N08RikA0A0U1RQ45 177 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gm867A0A1W2P7T4 151 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Zcchc24B2RVL6 241 aaKnown RBP11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Wipf3P0C7L0 485 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Nhlrc1Q8BR37 401 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 MavsQ8VCF0 503 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Igkv4-51A0N8I8 119 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gm15080A2BI02 449 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Ifitm5O88728 134 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Q3UNZ8 350 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Mbnl2Q8C181 373 aaKnown RBP11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Iah1Q9DB29 249 aa11.69□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Atp5g2P56383 146 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Fam168aQ8BGZ2 244 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Cox19Q8K0C8 92 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Trbv19A0A0B4J1H4 117 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Lcn2P11672 200 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Adra2aQ01338 450 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gpr82Q8BZR0 328 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Zfpl1Q9DB43 310 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Pglyrp3A1A547 347 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gm13030A2APQ6 143 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gm17660B9UIU9 90 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 P04212 136 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 H2-DMb2Q31099 261 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Tmem177Q8BPE4 311 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Olfr263Q7TQT8 317 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 MrapQ9D159 127 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Rnase6Q9D244 153 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Kif26bQ7TNC6 2112 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Wdr86D3Z757 380 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Egr1P08046 533 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Hint1P70349 126 aaKnown RBP11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Q8BG31 207 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 CenpvQ9CXS4 252 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Phpt1Q9DAK9 124 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Opn3Q9WUK7 400 aa11.68□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Trav16nA0A075B634 117 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Samd13D3YUG0 102 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gm933J3QPC1 141 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Dkk1O54908 272 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Hapln4Q80WM4 400 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Tm4sf20Q9CQY8 226 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Zfp36P22893 319 aaKnown RBP11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Psg22Q810J1 475 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Dusp14Q9JLY7 198 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Ighv5-16A0A0B4J1P4 117 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 TcraP01849 138 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 CfdP03953 259 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Zdhhc16Q9ESG8 361 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Olfr1369-ps1A0A140T8K7 317 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Rp1P56716 2095 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Trav14n-3A0A075B645 120 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Ighv1-37A0A0A6YW32 117 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Gm21983D6RFS9 131 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 ElaneQ3UP87 265 aa11.67□□□□□ -0.54
Col1a1-201ENSMUST00000001547 Olfr1258Q8VGN6 311 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 61.8 ms