Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Gm25239-201ENSMUST00000174915 86 ntBASIC35.42■■■■□ 3.26
Shisa6Q3UH99 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Shisa6Q3UH99 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Shisa6Q3UH99 Gm15042-201ENSMUST00000120212 883 ntBASIC30.89■■■□□ 2.54
Shisa6Q3UH99 Gm24109-201ENSMUST00000175489 103 ntBASIC30.74■■■□□ 2.51
Shisa6Q3UH99 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Shisa6Q3UH99 Gm15045-201ENSMUST00000117359 883 ntBASIC30.28■■■□□ 2.44
Shisa6Q3UH99 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Shisa6Q3UH99 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Shisa6Q3UH99 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Shisa6Q3UH99 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Shisa6Q3UH99 Gm23366-201ENSMUST00000175022 89 ntBASIC29.53■■■□□ 2.32
Shisa6Q3UH99 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
Shisa6Q3UH99 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Shisa6Q3UH99 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Shisa6Q3UH99 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Shisa6Q3UH99 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.67■■■□□ 2.18
Shisa6Q3UH99 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.64■■■□□ 2.18
Shisa6Q3UH99 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Shisa6Q3UH99 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Shisa6Q3UH99 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Shisa6Q3UH99 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.47■■■□□ 2.15
Shisa6Q3UH99 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Shisa6Q3UH99 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.26■■■□□ 2.11
Shisa6Q3UH99 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Shisa6Q3UH99 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shisa6Q3UH99 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shisa6Q3UH99 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Shisa6Q3UH99 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Shisa6Q3UH99 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Shisa6Q3UH99 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.07■■■□□ 2.08
Shisa6Q3UH99 Psd-208ENSMUST00000224556 2034 ntBASIC28.05■■■□□ 2.08
Shisa6Q3UH99 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Shisa6Q3UH99 Gm25238-201ENSMUST00000174914 89 ntBASIC28.02■■■□□ 2.08
Shisa6Q3UH99 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.9■■■□□ 2.06
Shisa6Q3UH99 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Shisa6Q3UH99 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Shisa6Q3UH99 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.53■■■□□ 2
Shisa6Q3UH99 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
Shisa6Q3UH99 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Shisa6Q3UH99 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Shisa6Q3UH99 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.26■■□□□ 1.95
Shisa6Q3UH99 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Shisa6Q3UH99 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Shisa6Q3UH99 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Shisa6Q3UH99 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shisa6Q3UH99 Gm27325-201ENSMUST00000175467 74 ntBASIC27.13■■□□□ 1.93
Shisa6Q3UH99 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.09■■□□□ 1.93
Shisa6Q3UH99 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
Shisa6Q3UH99 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Shisa6Q3UH99 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.97■■□□□ 1.91
Shisa6Q3UH99 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shisa6Q3UH99 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.92■■□□□ 1.9
Shisa6Q3UH99 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.87■■□□□ 1.89
Shisa6Q3UH99 Gm25262-201ENSMUST00000174934 133 ntBASIC26.76■■□□□ 1.87
Shisa6Q3UH99 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.73■■□□□ 1.87
Shisa6Q3UH99 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Shisa6Q3UH99 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shisa6Q3UH99 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Shisa6Q3UH99 Rab21-202ENSMUST00000218831 843 ntBASIC26.6■■□□□ 1.85
Shisa6Q3UH99 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Shisa6Q3UH99 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Shisa6Q3UH99 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
Shisa6Q3UH99 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Shisa6Q3UH99 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.51■■□□□ 1.83
Shisa6Q3UH99 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shisa6Q3UH99 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Shisa6Q3UH99 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Shisa6Q3UH99 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.37■■□□□ 1.81
Shisa6Q3UH99 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.33■■□□□ 1.81
Shisa6Q3UH99 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shisa6Q3UH99 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shisa6Q3UH99 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.32■■□□□ 1.8
Shisa6Q3UH99 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Shisa6Q3UH99 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Shisa6Q3UH99 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Shisa6Q3UH99 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Shisa6Q3UH99 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Shisa6Q3UH99 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shisa6Q3UH99 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.21■■□□□ 1.79
Shisa6Q3UH99 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shisa6Q3UH99 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.19■■□□□ 1.78
Shisa6Q3UH99 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Shisa6Q3UH99 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Shisa6Q3UH99 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Shisa6Q3UH99 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Shisa6Q3UH99 Gm26115-201ENSMUST00000175605 87 ntBASIC26.08■■□□□ 1.77
Shisa6Q3UH99 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Shisa6Q3UH99 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.04■■□□□ 1.76
Shisa6Q3UH99 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.04■■□□□ 1.76
Shisa6Q3UH99 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Shisa6Q3UH99 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.02■■□□□ 1.76
Shisa6Q3UH99 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Shisa6Q3UH99 Gm8109-201ENSMUST00000194076 746 ntBASIC25.96■■□□□ 1.75
Shisa6Q3UH99 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Shisa6Q3UH99 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Shisa6Q3UH99 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Shisa6Q3UH99 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.91■■□□□ 1.74
Shisa6Q3UH99 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Shisa6Q3UH99 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms