RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 YLL056CQ12177 298 aa0.38□□□□□ -2.35
snR50snR50 AHA1Q12449 350 aaKnown RBP0.38□□□□□ -2.35
snR50snR50 RRI1Q12468 440 aa0.38□□□□□ -2.35
snR50snR50 YDL012CQ12489 107 aa0.38□□□□□ -2.35
snR50snR50 PCK1P10963 549 aa0.37□□□□□ -2.35
snR50snR50 RPS2P25443 254 aaKnown RBP0.37□□□□□ -2.35
snR50snR50 MSH1P25846 959 aa0.37□□□□□ -2.35
snR50snR50 KES1P35844 434 aaKnown RBP0.37□□□□□ -2.35
snR50snR50 MCD4P36051 919 aa0.37□□□□□ -2.35
snR50snR50 MNN2P38069 597 aa0.37□□□□□ -2.35
snR50snR50 ARN1P38731 627 aa0.37□□□□□ -2.35
snR50snR50 SSZ1P38788 538 aaKnown RBP0.37□□□□□ -2.35
snR50snR50 RPN10P38886 268 aaKnown RBP0.37□□□□□ -2.35
snR50snR50 TMN3P40071 706 aa0.37□□□□□ -2.35
snR50snR50 HUL4P40985 892 aa0.37□□□□□ -2.35
snR50snR50 ATG27P46989 271 aa0.37□□□□□ -2.35
snR50snR50 PSP1P50896 841 aaKnown RBP0.37□□□□□ -2.35
snR50snR50 CWC24P53769 259 aa0.37□□□□□ -2.35
snR50snR50 YNL144CP53907 740 aa0.37□□□□□ -2.35
snR50snR50 SNP1Q00916 300 aaPredicted RBP0.37□□□□□ -2.35
snR50snR50 PPN1Q04119 674 aa0.37□□□□□ -2.35
snR50snR50 ECM22Q05958 814 aaPredicted RBP0.37□□□□□ -2.35
snR50snR50 UBX5Q06682 500 aa0.37□□□□□ -2.35
snR50snR50 ISA1Q07821 250 aaPredicted RBP0.37□□□□□ -2.35
snR50snR50 CRT10Q08226 957 aa0.37□□□□□ -2.35
snR50snR50 VHS3Q08438 674 aa0.37□□□□□ -2.35
snR50snR50 Q0142Q9ZZW4 58 aa0.37□□□□□ -2.35
snR50snR50 CHO2P05374 869 aaKnown RBP0.36□□□□□ -2.35
snR50snR50 RAD4P14736 754 aa0.36□□□□□ -2.35
snR50snR50 GAL11P19659 1081 aa0.36□□□□□ -2.35
snR50snR50 HNM1P19807 563 aa0.36□□□□□ -2.35
snR50snR50 RPN2P32565 945 aaKnown RBP0.36□□□□□ -2.35
snR50snR50 YKR051WP36142 418 aa0.36□□□□□ -2.35
snR50snR50 RRP8P38961 392 aaKnown RBP0.36□□□□□ -2.35
snR50snR50 BEM4P39011 633 aa0.36□□□□□ -2.35
snR50snR50 TPA1P40032 644 aaKnown RBP0.36□□□□□ -2.35
snR50snR50 MAM1P40065 302 aa0.36□□□□□ -2.35
snR50snR50 LAS21P40367 830 aa0.36□□□□□ -2.35
snR50snR50 SMK1P41808 388 aa0.36□□□□□ -2.35
snR50snR50 GPD1Q00055 391 aaKnown RBP0.36□□□□□ -2.35
snR50snR50 RNY1Q02933 434 aaKnown RBP0.36□□□□□ -2.35
snR50snR50 TAF8Q03750 510 aa0.36□□□□□ -2.35
snR50snR50 CAC2Q04199 468 aa0.36□□□□□ -2.35
snR50snR50 RAD33Q04231 177 aa0.36□□□□□ -2.35
snR50snR50 ARP9Q05123 467 aa0.36□□□□□ -2.35
snR50snR50 TDA5Q06417 326 aaKnown RBP0.36□□□□□ -2.35
snR50snR50 ARR3Q06598 404 aa0.36□□□□□ -2.35
snR50snR50 YDL124WQ07551 312 aaKnown RBP0.36□□□□□ -2.35
snR50snR50 MRN1Q08925 612 aaKnown RBP RIP-Chip data0.36□□□□□ -2.35not detected
snR50snR50 PFA4Q12006 378 aa0.36□□□□□ -2.35
snR50snR50 DIN7Q12086 430 aa0.36□□□□□ -2.35
snR50snR50 DAP1Q12091 152 aa0.36□□□□□ -2.35
snR50snR50 CAN1P04817 590 aa0.35□□□□□ -2.35
snR50snR50 CIT2P08679 460 aa0.35□□□□□ -2.35
snR50snR50 PRI2P20457 528 aa0.35□□□□□ -2.35
snR50snR50 IME1P21190 360 aa0.35□□□□□ -2.35
snR50snR50 MIH1P23748 554 aa0.35□□□□□ -2.35
snR50snR50 ARE1P25628 610 aa0.35□□□□□ -2.35
snR50snR50 SPR1P32603 445 aa0.35□□□□□ -2.35
snR50snR50 YEL045CP32616 141 aa0.35□□□□□ -2.35
snR50snR50 RAD24P32641 659 aa0.35□□□□□ -2.35
snR50snR50 STO1P34160 861 aaKnown RBP0.35□□□□□ -2.35
snR50snR50 PBP2P38151 413 aaKnown RBP RIP-Chip data0.35□□□□□ -2.35not detected
snR50snR50 YEL025CP39991 1188 aa0.35□□□□□ -2.35
snR50snR50 LRO1P40345 661 aa0.35□□□□□ -2.35
snR50snR50 MAD1P40957 749 aa0.35□□□□□ -2.35
snR50snR50 PXA1P41909 870 aa0.35□□□□□ -2.35
snR50snR50 CAF16P43569 289 aa0.35□□□□□ -2.35
snR50snR50 YJL132WP47014 750 aa0.35□□□□□ -2.35
snR50snR50 ORC5P50874 479 aa0.35□□□□□ -2.35
snR50snR50 EAF7P53911 425 aaKnown RBP0.35□□□□□ -2.35
snR50snR50 YNL092WP53934 400 aa0.35□□□□□ -2.35
snR50snR50 RAD34Q06665 692 aa0.35□□□□□ -2.35
snR50snR50 OSH2Q12451 1283 aa0.35□□□□□ -2.35
snR50snR50 CIT1P00890 479 aa0.34□□□□□ -2.36
snR50snR50 PDA1P16387 420 aaKnown RBP0.34□□□□□ -2.36
snR50snR50 HSP60P19882 572 aaKnown RBP0.34□□□□□ -2.36
snR50snR50 PRE4P30657 266 aa0.34□□□□□ -2.36
snR50snR50 MSN2P33748 704 aa0.34□□□□□ -2.36
snR50snR50 RIM2P38127 377 aa0.34□□□□□ -2.36
snR50snR50 YBP1P38315 674 aa0.34□□□□□ -2.36
snR50snR50 MDM31P38880 579 aa0.34□□□□□ -2.36
snR50snR50 YHR202WP38887 602 aa0.34□□□□□ -2.36
snR50snR50 VPS41P38959 992 aa0.34□□□□□ -2.36
snR50snR50 FTR1P40088 404 aa0.34□□□□□ -2.36
snR50snR50 ASG1P40467 964 aa0.34□□□□□ -2.36
snR50snR50 BUD8P41698 603 aa0.34□□□□□ -2.36
snR50snR50 VPS25P47142 202 aa0.34□□□□□ -2.36
snR50snR50 SDT1P53078 280 aa0.34□□□□□ -2.36
snR50snR50 ACS1Q01574 713 aa0.34□□□□□ -2.36
snR50snR50 NSE5Q03718 556 aa0.34□□□□□ -2.36
snR50snR50 NHX1Q04121 633 aa0.34□□□□□ -2.36
snR50snR50 PAL1Q05518 499 aaKnown RBP0.34□□□□□ -2.36
snR50snR50 HEL2Q05580 639 aaKnown RBP0.34□□□□□ -2.36
snR50snR50 POS5Q06892 414 aa0.34□□□□□ -2.36
snR50snR50 BI3Q9ZZW7 517 aa0.34□□□□□ -2.36
snR50snR50 TUF1P02992 437 aaKnown RBP0.33□□□□□ -2.36
snR50snR50 BAR1P12630 587 aa0.33□□□□□ -2.36
snR50snR50 YPK1P12688 680 aaKnown RBP0.33□□□□□ -2.36
snR50snR50 IMG2P25642 146 aaPredicted RBP0.33□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 586.6 ms