RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C FKH2P41813 862 aa3.44□□□□□ -1.86
LCB4YOR171C MAD3P47074 515 aa3.44□□□□□ -1.86
LCB4YOR171C YBP2P53169 641 aa3.44□□□□□ -1.86
LCB4YOR171C YHM2Q04013 314 aa3.44□□□□□ -1.86
LCB4YOR171C MDM36Q06820 579 aa3.44□□□□□ -1.86
LCB4YOR171C PMS1P14242 873 aa3.43□□□□□ -1.86
LCB4YOR171C PFK1P16861 987 aaKnown RBP3.43□□□□□ -1.86
LCB4YOR171C DBF4P32325 704 aa3.43□□□□□ -1.86
LCB4YOR171C SPC110P32380 944 aa3.43□□□□□ -1.86
LCB4YOR171C BYE1P36106 594 aa3.43□□□□□ -1.86
LCB4YOR171C APN2P38207 520 aa3.43□□□□□ -1.86
LCB4YOR171C UBP5P39944 805 aa3.43□□□□□ -1.86
LCB4YOR171C ZIM17P42844 174 aa3.43□□□□□ -1.86
LCB4YOR171C IRC6P43615 237 aa3.43□□□□□ -1.86
LCB4YOR171C NUP84P52891 726 aa3.43□□□□□ -1.86
LCB4YOR171C TEX1P53851 422 aaKnown RBP3.43□□□□□ -1.86
LCB4YOR171C HMO1Q03973 246 aaKnown RBP3.43□□□□□ -1.86
LCB4YOR171C RRB1Q04225 511 aaKnown RBP3.43□□□□□ -1.86
LCB4YOR171C PHO92Q06390 306 aa3.43□□□□□ -1.86
LCB4YOR171C MCP2Q06567 569 aa3.43□□□□□ -1.86
LCB4YOR171C MCM21Q06675 368 aa3.43□□□□□ -1.86
LCB4YOR171C MLH2Q07980 695 aa3.43□□□□□ -1.86
LCB4YOR171C TRP4P07285 380 aaPredicted RBP3.43□□□□□ -1.86
LCB4YOR171C PYC1P11154 1178 aaKnown RBP3.43□□□□□ -1.86
LCB4YOR171C MET8P15807 274 aa3.43□□□□□ -1.86
LCB4YOR171C OM45P16547 393 aa3.43□□□□□ -1.86
LCB4YOR171C PHO81P17442 1178 aa3.43□□□□□ -1.86
LCB4YOR171C AAC3P18238 307 aa3.43□□□□□ -1.86
LCB4YOR171C CLN1P20437 546 aa3.43□□□□□ -1.86
LCB4YOR171C AEP2P22136 580 aa3.43□□□□□ -1.86
LCB4YOR171C ERG6P25087 383 aaKnown RBP3.43□□□□□ -1.86
LCB4YOR171C SEC65P29478 273 aa3.43□□□□□ -1.86
LCB4YOR171C EFB1P32471 206 aaKnown RBP3.43□□□□□ -1.86
LCB4YOR171C NPL6P32832 435 aa3.43□□□□□ -1.86
LCB4YOR171C MTH1P35198 433 aa3.43□□□□□ -1.86
LCB4YOR171C MIC60P36112 540 aa3.43□□□□□ -1.86
LCB4YOR171C YHR202WP38887 602 aa3.43□□□□□ -1.86
LCB4YOR171C SPT8P38915 602 aa3.43□□□□□ -1.86
LCB4YOR171C NOP16P40007 231 aaKnown RBP3.43□□□□□ -1.86
LCB4YOR171C PHO23P50947 330 aa3.43□□□□□ -1.86
LCB4YOR171C DSL1P53847 754 aa3.43□□□□□ -1.86
LCB4YOR171C YNL050CP53952 270 aa3.43□□□□□ -1.86
LCB4YOR171C TIM50Q02776 476 aa3.43□□□□□ -1.86
LCB4YOR171C RRN5Q02983 363 aa3.43□□□□□ -1.86
LCB4YOR171C YLR407WQ06070 228 aa3.43□□□□□ -1.86
LCB4YOR171C APL4Q12028 832 aa3.43□□□□□ -1.86
LCB4YOR171C TRM13Q12383 476 aa3.43□□□□□ -1.86
LCB4YOR171C CTT1P06115 562 aa3.42□□□□□ -1.86
LCB4YOR171C PDX1P16451 410 aa3.42□□□□□ -1.86
LCB4YOR171C MNE1P24720 663 aa3.42□□□□□ -1.86
LCB4YOR171C IMG2P25642 146 aaPredicted RBP3.42□□□□□ -1.86
LCB4YOR171C YKU70P32807 602 aa3.42□□□□□ -1.86
LCB4YOR171C TEF4P36008 412 aaKnown RBP3.42□□□□□ -1.86
LCB4YOR171C PSY4P38193 441 aa3.42□□□□□ -1.86
LCB4YOR171C YNL195CP40168 261 aa3.42□□□□□ -1.86
LCB4YOR171C UTP18P40362 594 aaPredicted RBP3.42□□□□□ -1.86
LCB4YOR171C PXA1P41909 870 aa3.42□□□□□ -1.86
LCB4YOR171C SKP2P42843 763 aa3.42□□□□□ -1.86
LCB4YOR171C POL31P46957 487 aa3.42□□□□□ -1.86
LCB4YOR171C LSB1P53281 241 aa3.42□□□□□ -1.86
LCB4YOR171C YGR250CP53316 781 aaKnown RBP3.42□□□□□ -1.86
LCB4YOR171C ERV25P54837 211 aaKnown RBP3.42□□□□□ -1.86
LCB4YOR171C GPD1Q00055 391 aaKnown RBP3.42□□□□□ -1.86
LCB4YOR171C DPB4Q04603 196 aaKnown RBP3.42□□□□□ -1.86
LCB4YOR171C GSF2Q04697 403 aaKnown RBP3.42□□□□□ -1.86
LCB4YOR171C CIA1Q05583 330 aa3.42□□□□□ -1.86
LCB4YOR171C ADE13Q05911 482 aaKnown RBP3.42□□□□□ -1.86
LCB4YOR171C RGC1Q06108 1083 aaKnown RBP3.42□□□□□ -1.86
LCB4YOR171C NFI1Q12216 726 aa3.42□□□□□ -1.86
LCB4YOR171C RMP1Q12530 201 aa3.42□□□□□ -1.86
LCB4YOR171C SSM4P40318 1319 aa3.42□□□□□ -1.86
LCB4YOR171C HOM2P13663 365 aaKnown RBP3.41□□□□□ -1.86
LCB4YOR171C ATP12P22135 325 aa3.41□□□□□ -1.86
LCB4YOR171C LCB1P25045 558 aaKnown RBP3.41□□□□□ -1.86
LCB4YOR171C HCM1P25364 564 aa3.41□□□□□ -1.86
LCB4YOR171C MDL1P33310 695 aa3.41□□□□□ -1.86
LCB4YOR171C COY1P34237 679 aa3.41□□□□□ -1.86
LCB4YOR171C YKR075CP36155 307 aa3.41□□□□□ -1.86
LCB4YOR171C SHM2P37291 469 aaKnown RBP3.41□□□□□ -1.86
LCB4YOR171C YBR053CP38235 358 aa3.41□□□□□ -1.86
LCB4YOR171C LYS9P38999 446 aa3.41□□□□□ -1.86
LCB4YOR171C YMR124WP39523 943 aaKnown RBP3.41□□□□□ -1.86
LCB4YOR171C YJL070CP40361 888 aa3.41□□□□□ -1.86
LCB4YOR171C QRI7P43122 407 aa3.41□□□□□ -1.86
LCB4YOR171C TCB2P48231 1178 aa3.41□□□□□ -1.86
LCB4YOR171C VPS9P54787 451 aa3.41□□□□□ -1.86
LCB4YOR171C TIM10P87108 93 aa3.41□□□□□ -1.86
LCB4YOR171C UTP21Q06078 939 aaPredicted RBP3.41□□□□□ -1.86
LCB4YOR171C HRP1Q99383 534 aaKnown RBP3.41□□□□□ -1.86
LCB4YOR171C MIS1P09440 975 aaKnown RBP3.41□□□□□ -1.86
LCB4YOR171C GLN4P13188 809 aaKnown RBP3.41□□□□□ -1.86
LCB4YOR171C SEC18P18759 758 aaKnown RBP3.41□□□□□ -1.86
LCB4YOR171C DEP1P31385 405 aa3.41□□□□□ -1.86
LCB4YOR171C ACP1P32463 125 aa3.41□□□□□ -1.86
LCB4YOR171C KRE6P32486 720 aa3.41□□□□□ -1.86
LCB4YOR171C CBF2P32504 956 aa3.41□□□□□ -1.86
LCB4YOR171C RPN2P32565 945 aaKnown RBP3.41□□□□□ -1.86
LCB4YOR171C PAH1P32567 862 aa3.41□□□□□ -1.86
LCB4YOR171C APT2P36973 181 aa3.41□□□□□ -1.86
LCB4YOR171C RFC1P38630 861 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms