RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W RMT2Q03305 412 aa5.24□□□□□ -1.57
ROT1YMR200W PRP42Q03776 544 aaKnown RBP5.24□□□□□ -1.57
ROT1YMR200W SNO4Q04902 237 aa5.24□□□□□ -1.57
ROT1YMR200W CSR1Q06705 408 aaKnown RBP5.24□□□□□ -1.57
ROT1YMR200W CDC45Q08032 650 aa5.24□□□□□ -1.57
ROT1YMR200W CUE5Q08412 411 aaKnown RBP5.24□□□□□ -1.57
ROT1YMR200W FRE5Q08908 694 aa5.24□□□□□ -1.57
ROT1YMR200W HSP33Q08914 237 aaKnown RBP5.24□□□□□ -1.57
ROT1YMR200W HSP32Q08992 237 aa5.24□□□□□ -1.57
ROT1YMR200W NOP58Q12499 511 aaKnown RBP5.24□□□□□ -1.57
ROT1YMR200W OLE1P21147 510 aaKnown RBP5.23□□□□□ -1.57
ROT1YMR200W MCM3P24279 971 aaKnown RBP5.23□□□□□ -1.57
ROT1YMR200W YKR051WP36142 418 aa5.23□□□□□ -1.57
ROT1YMR200W NPR3P38742 1146 aa5.23□□□□□ -1.57
ROT1YMR200W YLF2P38746 405 aa5.23□□□□□ -1.57
ROT1YMR200W SWD1P39706 426 aa5.23□□□□□ -1.57
ROT1YMR200W RLP7P40693 322 aaKnown RBP5.23□□□□□ -1.57
ROT1YMR200W POL31P46957 487 aa5.23□□□□□ -1.57
ROT1YMR200W PUS4P48567 403 aaKnown RBP5.23□□□□□ -1.57
ROT1YMR200W YNR061CP53747 219 aa5.23□□□□□ -1.57
ROT1YMR200W ZDS2P54786 942 aa5.23□□□□□ -1.57
ROT1YMR200W VPS9P54787 451 aa5.23□□□□□ -1.57
ROT1YMR200W SSL2Q00578 843 aa5.23□□□□□ -1.57
ROT1YMR200W RPT6Q01939 405 aaKnown RBP5.23□□□□□ -1.57
ROT1YMR200W NGL1Q08213 363 aaKnown RBP5.23□□□□□ -1.57
ROT1YMR200W PAR32Q12515 295 aaKnown RBP5.23□□□□□ -1.57
ROT1YMR200W DIF1O13577 133 aa5.22□□□□□ -1.57
ROT1YMR200W RPC40P07703 335 aaKnown RBP5.22□□□□□ -1.57
ROT1YMR200W MET3P08536 511 aa5.22□□□□□ -1.57
ROT1YMR200W RPN2P32565 945 aaKnown RBP5.22□□□□□ -1.57
ROT1YMR200W PPS1P38148 807 aa5.22□□□□□ -1.57
ROT1YMR200W FTH1P38310 465 aa5.22□□□□□ -1.57
ROT1YMR200W GDI1P39958 451 aaKnown RBP5.22□□□□□ -1.57
ROT1YMR200W YEL025CP39991 1188 aa5.22□□□□□ -1.57
ROT1YMR200W SEC28P40509 296 aaKnown RBP5.22□□□□□ -1.57
ROT1YMR200W VID28P40547 921 aa5.22□□□□□ -1.57
ROT1YMR200W FYV8P46949 817 aaKnown RBP5.22□□□□□ -1.57
ROT1YMR200W MDE1P47095 244 aa5.22□□□□□ -1.57
ROT1YMR200W MUP1P50276 574 aa5.22□□□□□ -1.57
ROT1YMR200W CIK1Q01649 594 aa5.22□□□□□ -1.57
ROT1YMR200W MTD1Q02046 320 aaKnown RBP5.22□□□□□ -1.57
ROT1YMR200W PEX25Q02969 394 aa5.22□□□□□ -1.57
ROT1YMR200W YDR131CQ03899 556 aa5.22□□□□□ -1.57
ROT1YMR200W MUS81Q04149 632 aaPredicted RBP5.22□□□□□ -1.57
ROT1YMR200W DLT1Q04216 342 aa5.22□□□□□ -1.57
ROT1YMR200W YMR111CQ04461 462 aaPredicted RBP5.22□□□□□ -1.57
ROT1YMR200W CRR1Q05790 422 aa5.22□□□□□ -1.57
ROT1YMR200W RPN7Q06103 429 aaKnown RBP5.22□□□□□ -1.57
ROT1YMR200W TFC6Q06339 672 aa5.22□□□□□ -1.57
ROT1YMR200W REX3Q12090 404 aa5.22□□□□□ -1.57
ROT1YMR200W NFI1Q12216 726 aa5.22□□□□□ -1.57
ROT1YMR200W PRC1P00729 532 aa5.21□□□□□ -1.58
ROT1YMR200W GCN4P03069 281 aa5.21□□□□□ -1.58
ROT1YMR200W VAS1P07806 1104 aaKnown RBP5.21□□□□□ -1.58
ROT1YMR200W MIS1P09440 975 aaKnown RBP5.21□□□□□ -1.58
ROT1YMR200W GLN4P13188 809 aaKnown RBP5.21□□□□□ -1.58
ROT1YMR200W CBP3P21560 335 aa5.21□□□□□ -1.58
ROT1YMR200W ROX1P25042 368 aa5.21□□□□□ -1.58
ROT1YMR200W GPI10P30777 616 aa5.21□□□□□ -1.58
ROT1YMR200W HXT4P32467 576 aa5.21□□□□□ -1.58
ROT1YMR200W CBF2P32504 956 aa5.21□□□□□ -1.58
ROT1YMR200W TEF4P36008 412 aaKnown RBP5.21□□□□□ -1.58
ROT1YMR200W MRPL36P36531 177 aa5.21□□□□□ -1.58
ROT1YMR200W SRP68P38687 599 aaKnown RBP5.21□□□□□ -1.58
ROT1YMR200W LTP1P40347 161 aa5.21□□□□□ -1.58
ROT1YMR200W DJP1P40564 432 aa5.21□□□□□ -1.58
ROT1YMR200W SHR5P41912 237 aa5.21□□□□□ -1.58
ROT1YMR200W YFL052WP43551 465 aa5.21□□□□□ -1.58
ROT1YMR200W SSY5P47002 699 aa5.21□□□□□ -1.58
ROT1YMR200W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
ROT1YMR200W APL5Q08951 932 aaKnown RBP5.21□□□□□ -1.58
ROT1YMR200W ACF2Q12168 779 aa5.21□□□□□ -1.58
ROT1YMR200W RTN2Q12443 393 aa5.21□□□□□ -1.58
ROT1YMR200W POL3P15436 1097 aa5.2□□□□□ -1.58
ROT1YMR200W BET2P20133 325 aa5.2□□□□□ -1.58
ROT1YMR200W CNS1P33313 385 aa5.2□□□□□ -1.58
ROT1YMR200W ESL2P36168 1195 aa5.2□□□□□ -1.58
ROT1YMR200W YBR053CP38235 358 aa5.2□□□□□ -1.58
ROT1YMR200W YBR138CP38277 524 aa5.2□□□□□ -1.58
ROT1YMR200W UTP9P38882 575 aaKnown RBP5.2□□□□□ -1.58
ROT1YMR200W SAK1P38990 1142 aa5.2□□□□□ -1.58
ROT1YMR200W STT3P39007 718 aaKnown RBP5.2□□□□□ -1.58
ROT1YMR200W PCL7P40186 285 aa5.2□□□□□ -1.58
ROT1YMR200W LCB2P40970 561 aa5.2□□□□□ -1.58
ROT1YMR200W PFA3P42836 336 aa5.2□□□□□ -1.58
ROT1YMR200W BSC5P53755 489 aa5.2□□□□□ -1.58
ROT1YMR200W ASM4Q05166 528 aa5.2□□□□□ -1.58
ROT1YMR200W YLR345WQ06137 509 aa5.2□□□□□ -1.58
ROT1YMR200W THI21Q08975 551 aa5.2□□□□□ -1.58
ROT1YMR200W GPR1Q12361 961 aa5.2□□□□□ -1.58
ROT1YMR200W ZRT2Q12436 422 aa5.2□□□□□ -1.58
ROT1YMR200W SKM1Q12469 655 aa5.2□□□□□ -1.58
ROT1YMR200W Q0142Q9ZZW4 58 aa5.2□□□□□ -1.58
ROT1YMR200W SWI6P09959 803 aa5.19□□□□□ -1.58
ROT1YMR200W CAF20P12962 161 aaKnown RBP5.19□□□□□ -1.58
ROT1YMR200W REC107P21651 314 aa5.19□□□□□ -1.58
ROT1YMR200W SAC6P32599 642 aaKnown RBP5.19□□□□□ -1.58
ROT1YMR200W SAP190P36123 1033 aa5.19□□□□□ -1.58
ROT1YMR200W SET3P36124 751 aa5.19□□□□□ -1.58
ROT1YMR200W YKR075CP36155 307 aa5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 1160.8 ms